RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 SMC4Q9NTJ3 1288 aa14.51□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SKOR2Q2VWA4 1001 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SPRYD3Q8NCJ5 442 aa14.51□□□□□ -0.09
CDK5RAP3-232ENST00000584168 MFAP1P55081 439 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SATB1Q01826 763 aa14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 ANKARQ7Z5J8 1434 aa14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 TTC21BQ7Z4L5 1316 aa14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 TOPAZ1Q8N9V7 1692 aa14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 RBM25P49756 843 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SH3BP1Q9Y3L3 701 aa14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 TMEM94Q12767 1356 aa14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 CPSF1Q10570 1443 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-232ENST00000584168 PDLIM2Q96JY6 352 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 ITSN1Q15811 1721 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 APAF1O14727 1248 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 CCDC172P0C7W6 258 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.096e-9■■■□□ 17
CDK5RAP3-232ENST00000584168 SLFN5Q08AF3 891 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 COG3Q96JB2 828 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 CFAP44Q96MT7 982 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 PHF8Q9UPP1 1060 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 NOP2P46087 812 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
CDK5RAP3-232ENST00000584168 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
CDK5RAP3-232ENST00000584168 TRERF1Q96PN7 1200 aa14.48□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SEC24BO95487 1268 aa14.48□□□□□ -0.09
CDK5RAP3-232ENST00000584168 OS9Q13438 667 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-232ENST00000584168 RSPH14Q9UHP6 348 aa14.48□□□□□ -0.09
CDK5RAP3-232ENST00000584168 DCCP43146 1447 aa14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 NLRP6P59044 892 aa14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 PSME1Q06323 249 aa14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SEMA3FQ13275 785 aa14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 C19orf44Q9H6X5 657 aa14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 XIRP1Q702N8 1843 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 FAM177BA6PVY3 158 aa14.47□□□□□ -0.09
CDK5RAP3-232ENST00000584168 GOLIM4O00461 696 aa14.46□□□□□ -0.09
CDK5RAP3-232ENST00000584168 HMOX1P09601 288 aa14.46□□□□□ -0.09
CDK5RAP3-232ENST00000584168 TERF2Q15554 542 aa14.46□□□□□ -0.09
CDK5RAP3-232ENST00000584168 ABTB2Q8N961 1025 aa14.46□□□□□ -0.09
CDK5RAP3-232ENST00000584168 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-232ENST00000584168 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-232ENST00000584168 MPNDQ8N594 471 aa14.45□□□□□ -0.1
CDK5RAP3-232ENST00000584168 CCDC39Q9UFE4 941 aa14.45□□□□□ -0.1
CDK5RAP3-232ENST00000584168 MSH6P52701 1360 aa14.45□□□□□ -0.1
CDK5RAP3-232ENST00000584168 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
CDK5RAP3-232ENST00000584168 EDC4Q6P2E9 1401 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 DHX16O60231 1041 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 BCAR3O75815 825 aa14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 ATF3P18847 181 aa14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 TRMT2AQ8IZ69 625 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 KIAA2012Q0VF49 1180 aa14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 CFAP53Q96M91 514 aa14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 USP6P35125 1406 aa14.44□□□□□ -0.1
CDK5RAP3-232ENST00000584168 IBTKQ9P2D0 1353 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 ERICH4A6NGS2 130 aa14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 MAP2K1Q02750 393 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 ICE2Q659A1 982 aa14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 ANKRD7Q92527 254 aa14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 RNF217Q8TC41 542 aa14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-232ENST00000584168 HSP90AB2PQ58FF8 381 aa14.42□□□□□ -0.1
CDK5RAP3-232ENST00000584168 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
CDK5RAP3-232ENST00000584168 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
CDK5RAP3-232ENST00000584168 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
CDK5RAP3-232ENST00000584168 GBP4Q96PP9 640 aa14.41□□□□□ -0.1
CDK5RAP3-232ENST00000584168 TMX1Q9H3N1 280 aa14.41□□□□□ -0.1
CDK5RAP3-232ENST00000584168 CABLES1Q8TDN4 633 aa14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 TBC1D32Q96NH3 1257 aa14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 BRMS1Q9HCU9 246 aa14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 POLR3AO14802 1390 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 DIAPH1O60610 1272 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
CDK5RAP3-232ENST00000584168 NSD2O96028 1365 aa14.4□□□□□ -0.11
CDK5RAP3-232ENST00000584168 GPATCH11Q8N954 259 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 MST1RQ04912 1400 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 IGHDP01880 384 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 GUCY2CP25092 1073 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 RAD51AP2Q09MP3 1159 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 TCP11L2Q8N4U5 519 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 RASSF4Q9H2L5 321 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
CDK5RAP3-232ENST00000584168 KIF1AQ12756 1690 aa14.38□□□□□ -0.11
CDK5RAP3-232ENST00000584168 KRT28Q7Z3Y7 464 aa14.38□□□□□ -0.11
CDK5RAP3-232ENST00000584168 DONSONQ9NYP3 566 aa14.38□□□□□ -0.11
CDK5RAP3-232ENST00000584168 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
CDK5RAP3-232ENST00000584168 HMGB1P09429 215 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-232ENST00000584168 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-232ENST00000584168 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
CDK5RAP3-232ENST00000584168 KIF20BQ96Q89 1820 aa14.37□□□□□ -0.11
CDK5RAP3-232ENST00000584168 PHACTR3Q96KR7 559 aa14.36□□□□□ -0.11
CDK5RAP3-232ENST00000584168 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-232ENST00000584168 AMPHP49418 695 aa14.36□□□□□ -0.11
CDK5RAP3-232ENST00000584168 NBPF11Q86T75 865 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms