RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 F8W031 263 aaPredicted RBP13.17□□□□□ -0.3
MSI2-217ENST00000583705 IMMTQ16891 758 aaKnown RBP13.17□□□□□ -0.3
MSI2-217ENST00000583705 FILIP1Q7Z7B0 1213 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
MSI2-217ENST00000583705 BLOC1S2Q6QNY1 142 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
MSI2-217ENST00000583705 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
MSI2-217ENST00000583705 APBB1IPQ7Z5R6 666 aaPredicted RBP13.17□□□□□ -0.3
MSI2-217ENST00000583705 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 TRAK2O60296 914 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
MSI2-217ENST00000583705 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 NLRP5P59047 1200 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 MYD88Q99836 296 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 CFAP100Q494V2 611 aa13.16□□□□□ -0.3
MSI2-217ENST00000583705 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 SPA17Q15506 151 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 PRC1O43663 620 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 IQCEQ6IPM2 695 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 NAPBQ9H115 298 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 SYNCQ9H7C4 482 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
MSI2-217ENST00000583705 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
MSI2-217ENST00000583705 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
MSI2-217ENST00000583705 TDRD12Q587J7 1177 aaKnown RBP13.14□□□□□ -0.31
MSI2-217ENST00000583705 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 KRT85P78386 507 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 TAF12Q16514 161 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 SH3BP5O60239 455 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
MSI2-217ENST00000583705 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 CEP131Q9UPN4 1083 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 MYO1BO43795 1136 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 FERP16591 822 aa13.14□□□□□ -0.31
MSI2-217ENST00000583705 CPLX3Q8WVH0 158 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 TRMT112Q9UI30 125 aaKnown RBP13.13□□□□□ -0.31
MSI2-217ENST00000583705 NACADO15069 1562 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 CTNNA3Q9UI47 895 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
MSI2-217ENST00000583705 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
MSI2-217ENST00000583705 FKBP15Q5T1M5 1219 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 LUZP1Q86V48 1076 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 RFC4P35249 363 aa13.13□□□□□ -0.31
MSI2-217ENST00000583705 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
MSI2-217ENST00000583705 PROCA1Q8NCQ7 364 aaPredicted RBP13.12□□□□□ -0.31
MSI2-217ENST00000583705 GIMAP7Q8NHV1 300 aa13.12□□□□□ -0.31
MSI2-217ENST00000583705 WASF1Q92558 559 aa13.12□□□□□ -0.31
MSI2-217ENST00000583705 TSNARE1Q96NA8 513 aa13.12□□□□□ -0.31
MSI2-217ENST00000583705 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
MSI2-217ENST00000583705 ERLIN1O75477 346 aa13.12□□□□□ -0.31
MSI2-217ENST00000583705 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
MSI2-217ENST00000583705 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
MSI2-217ENST00000583705 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
MSI2-217ENST00000583705 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
MSI2-217ENST00000583705 ZWINTO95229 277 aa13.11□□□□□ -0.31
MSI2-217ENST00000583705 UQCRHP07919 91 aa13.11□□□□□ -0.31
MSI2-217ENST00000583705 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
MSI2-217ENST00000583705 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
MSI2-217ENST00000583705 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
MSI2-217ENST00000583705 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
MSI2-217ENST00000583705 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
MSI2-217ENST00000583705 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
MSI2-217ENST00000583705 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
MSI2-217ENST00000583705 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
MSI2-217ENST00000583705 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
MSI2-217ENST00000583705 PPP1R14CQ8TAE6 165 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 FERMT3Q86UX7 667 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 RAB3IL1Q8TBN0 382 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
MSI2-217ENST00000583705 VPS36Q86VN1 386 aa13.1□□□□□ -0.31
MSI2-217ENST00000583705 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms