RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 TEFQ10587 303 aa11.34□□□□□ -0.59
SUPT6H-208ENST00000583340 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
SUPT6H-208ENST00000583340 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
SUPT6H-208ENST00000583340 PPP1R1BQ9UD71 204 aaPredicted RBP11.34□□□□□ -0.59
SUPT6H-208ENST00000583340 PAPPAQ13219 1627 aa11.34□□□□□ -0.59
SUPT6H-208ENST00000583340 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
SUPT6H-208ENST00000583340 ATP6V1AP38606 617 aa11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
SUPT6H-208ENST00000583340 SCN11AQ9UI33 1791 aa11.32□□□□□ -0.6
SUPT6H-208ENST00000583340 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
SUPT6H-208ENST00000583340 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
SUPT6H-208ENST00000583340 PRKRIP1Q9H875 184 aaPredicted RBP11.32□□□□□ -0.6
SUPT6H-208ENST00000583340 MSH5O43196 834 aa11.31□□□□□ -0.6
SUPT6H-208ENST00000583340 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-208ENST00000583340 POLD1P28340 1107 aa11.31□□□□□ -0.6
SUPT6H-208ENST00000583340 YTHDC1Q96MU7 727 aaKnown RBP11.31□□□□□ -0.6
SUPT6H-208ENST00000583340 MRC1P22897 1456 aa11.31□□□□□ -0.6
SUPT6H-208ENST00000583340 C5P01031 1676 aa11.3□□□□□ -0.6
SUPT6H-208ENST00000583340 QSER1Q2KHR3 1735 aa11.3□□□□□ -0.6
SUPT6H-208ENST00000583340 ZBTB7AO95365 584 aa11.3□□□□□ -0.6
SUPT6H-208ENST00000583340 KCNQ4P56696 695 aa11.3□□□□□ -0.6
SUPT6H-208ENST00000583340 SRCAPQ6ZRS2 3230 aa11.3□□□□□ -0.6
SUPT6H-208ENST00000583340 CASZ1Q86V15 1759 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 SSFA2P28290 1259 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 LMOD3Q0VAK6 560 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 PNPLA7Q6ZV29 1317 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
SUPT6H-208ENST00000583340 ZNF831Q5JPB2 1677 aa11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 GNPATO15228 680 aa11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 ADRA2BP18089 450 aa11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
SUPT6H-208ENST00000583340 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.6
SUPT6H-208ENST00000583340 NFE2L2Q16236 605 aa11.27□□□□□ -0.61
SUPT6H-208ENST00000583340 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
SUPT6H-208ENST00000583340 LINC00116Q8NCU8 138 aa11.27□□□□□ -0.61
SUPT6H-208ENST00000583340 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.61
SUPT6H-208ENST00000583340 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
SUPT6H-208ENST00000583340 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
SUPT6H-208ENST00000583340 BTBD11A6QL63 1104 aa11.26□□□□□ -0.61
SUPT6H-208ENST00000583340 STARD3NLO95772 234 aa11.26□□□□□ -0.61
SUPT6H-208ENST00000583340 ITPK1Q13572 414 aa11.26□□□□□ -0.61
SUPT6H-208ENST00000583340 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
SUPT6H-208ENST00000583340 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
SUPT6H-208ENST00000583340 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 PHF14O94880 888 aa11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 COL23A1Q86Y22 540 aaPredicted RBP11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 FMNL2Q96PY5 1086 aa11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
SUPT6H-208ENST00000583340 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
SUPT6H-208ENST00000583340 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
SUPT6H-208ENST00000583340 MCM10Q7L590 875 aa11.24□□□□□ -0.61
SUPT6H-208ENST00000583340 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
SUPT6H-208ENST00000583340 ARXQ96QS3 562 aa11.24□□□□□ -0.61
SUPT6H-208ENST00000583340 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
SUPT6H-208ENST00000583340 TUBGCP6Q96RT7 1819 aa11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 RPS6KA4O75676 772 aa11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 RFC4P35249 363 aa11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 PTGER2P43116 358 aa11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 TAF7Q15545 349 aaPredicted RBP11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 CCDC87Q9NVE4 849 aa11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
SUPT6H-208ENST00000583340 RIPK4P57078 832 aa11.22□□□□□ -0.61
SUPT6H-208ENST00000583340 UBR3Q6ZT12 1888 aa11.22□□□□□ -0.61
SUPT6H-208ENST00000583340 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
SUPT6H-208ENST00000583340 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
SUPT6H-208ENST00000583340 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
SUPT6H-208ENST00000583340 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.61
SUPT6H-208ENST00000583340 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
SUPT6H-208ENST00000583340 A0A087WZG4 1122 aa11.21□□□□□ -0.61
SUPT6H-208ENST00000583340 ZPR1O75312 459 aa11.21□□□□□ -0.61
SUPT6H-208ENST00000583340 NLGN1Q8N2Q7 840 aa11.21□□□□□ -0.61
SUPT6H-208ENST00000583340 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 CALD1Q05682 793 aaKnown RBP11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 DCTN1Q14203 1278 aa11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 BABAM1Q9NWV8 329 aa11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 ADAMTS8Q9UP79 889 aa11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 SIPA1L3O60292 1781 aaPredicted RBP11.2□□□□□ -0.62
SUPT6H-208ENST00000583340 UBR2Q8IWV8 1755 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms