RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 RIPK4P57078 832 aa28.6■■■□□ 2.17
TSEN54-208ENST00000583173 DCTN1Q14203 1278 aa28.6■■■□□ 2.17
TSEN54-208ENST00000583173 MCM10Q7L590 875 aa28.6■■■□□ 2.17
TSEN54-208ENST00000583173 RGPD3A6NKT7 1758 aaPredicted RBP28.6■■■□□ 2.17
TSEN54-208ENST00000583173 RGPD4Q7Z3J3 1758 aa28.6■■■□□ 2.17
TSEN54-208ENST00000583173 SLC27A3Q5K4L6 730 aa28.58■■■□□ 2.17
TSEN54-208ENST00000583173 RTF1Q92541 710 aaKnown RBP28.58■■■□□ 2.17
TSEN54-208ENST00000583173 TRIM35Q9UPQ4 493 aa28.57■■■□□ 2.16
TSEN54-208ENST00000583173 PALLDQ8WX93 1383 aa28.57■■■□□ 2.16
TSEN54-208ENST00000583173 APAF1O14727 1248 aa28.56■■■□□ 2.16
TSEN54-208ENST00000583173 RRP7AQ9Y3A4 280 aaKnown RBP28.56■■■□□ 2.16
TSEN54-208ENST00000583173 SLC4A9Q96Q91 983 aa28.55■■■□□ 2.16
TSEN54-208ENST00000583173 TEFQ10587 303 aa28.54■■■□□ 2.16
TSEN54-208ENST00000583173 RREB1Q92766 1687 aa28.54■■■□□ 2.16
TSEN54-208ENST00000583173 KCNQ4P56696 695 aa28.53■■■□□ 2.16
TSEN54-208ENST00000583173 LY75O60449 1722 aa28.52■■■□□ 2.16
TSEN54-208ENST00000583173 LOC102724428A0A0B4J2F2 783 aa28.52■■■□□ 2.16
TSEN54-208ENST00000583173 SIK1P57059 783 aa28.52■■■□□ 2.16
TSEN54-208ENST00000583173 SLC39A6Q13433 755 aa28.52■■■□□ 2.16
TSEN54-208ENST00000583173 DLG5Q8TDM6 1919 aa28.51■■■□□ 2.16
TSEN54-208ENST00000583173 TAF7Q15545 349 aaPredicted RBP28.51■■■□□ 2.15
TSEN54-208ENST00000583173 FAM9BQ8IZU0 186 aa28.51■■■□□ 2.15
TSEN54-208ENST00000583173 THUMPD2Q9BTF0 503 aaKnown RBP28.51■■■□□ 2.15
TSEN54-208ENST00000583173 CCNL1Q9UK58 526 aaPredicted RBP28.51■■■□□ 2.15
TSEN54-208ENST00000583173 VIRMAQ69YN4 1812 aaKnown RBP28.5■■■□□ 2.15
TSEN54-208ENST00000583173 NEUROD2Q15784 382 aa28.5■■■□□ 2.15
TSEN54-208ENST00000583173 NCBP3Q53F19 620 aaKnown RBP28.49■■■□□ 2.15
TSEN54-208ENST00000583173 LMOD3Q0VAK6 560 aa28.48■■■□□ 2.15
TSEN54-208ENST00000583173 SIPA1L3O60292 1781 aaPredicted RBP28.47■■■□□ 2.15
TSEN54-208ENST00000583173 NUP188Q5SRE5 1749 aa28.47■■■□□ 2.15
TSEN54-208ENST00000583173 BTBD11A6QL63 1104 aa28.47■■■□□ 2.15
TSEN54-208ENST00000583173 KCNQ3O43525 872 aa28.47■■■□□ 2.15
TSEN54-208ENST00000583173 ITPK1Q13572 414 aa28.47■■■□□ 2.15
TSEN54-208ENST00000583173 ZNF790Q6PG37 636 aa28.47■■■□□ 2.15
TSEN54-208ENST00000583173 ANO8Q9HCE9 1232 aaPredicted RBP28.47■■■□□ 2.15
TSEN54-208ENST00000583173 AKT1S1Q96B36 256 aa28.46■■■□□ 2.15
TSEN54-208ENST00000583173 PTCD1O75127 700 aaKnown RBP28.45■■■□□ 2.14
TSEN54-208ENST00000583173 NBPF14Q5TI25 921 aa28.45■■■□□ 2.14
TSEN54-208ENST00000583173 RBM42Q9BTD8 480 aaKnown RBP28.45■■■□□ 2.14
TSEN54-208ENST00000583173 ATP6V1AP38606 617 aa28.44■■■□□ 2.14
TSEN54-208ENST00000583173 SLC15A2Q16348 729 aa28.43■■■□□ 2.14
TSEN54-208ENST00000583173 CCDC27Q2M243 656 aa28.43■■■□□ 2.14
TSEN54-208ENST00000583173 MIS18AQ9NYP9 233 aa28.43■■■□□ 2.14
TSEN54-208ENST00000583173 PAPPAQ13219 1627 aa28.43■■■□□ 2.14
TSEN54-208ENST00000583173 ZNF827Q17R98 1081 aa28.42■■■□□ 2.14
TSEN54-208ENST00000583173 LINC00116Q8NCU8 138 aa28.42■■■□□ 2.14
TSEN54-208ENST00000583173 KCPQ6ZWJ8 1503 aa28.42■■■□□ 2.14
TSEN54-208ENST00000583173 HMGB2P26583 209 aaKnown RBP28.41■■■□□ 2.14
TSEN54-208ENST00000583173 VSIG10Q8N0Z9 540 aa28.41■■■□□ 2.14
TSEN54-208ENST00000583173 ZNF496Q96IT1 587 aaPredicted RBP28.41■■■□□ 2.14
TSEN54-208ENST00000583173 BABAM1Q9NWV8 329 aa28.41■■■□□ 2.14
TSEN54-208ENST00000583173 ZNF831Q5JPB2 1677 aa28.39■■■□□ 2.14
TSEN54-208ENST00000583173 CHL1O00533 1208 aa28.39■■■□□ 2.14
TSEN54-208ENST00000583173 R3HDM1Q15032 1099 aaKnown RBP28.38■■■□□ 2.13
TSEN54-208ENST00000583173 TTC5Q8N0Z6 440 aa28.38■■■□□ 2.13
TSEN54-208ENST00000583173 STK32BQ9NY57 414 aa28.38■■■□□ 2.13
TSEN54-208ENST00000583173 SENP3-EIF4A1A0A087X0R7 540 aa28.37■■■□□ 2.13
TSEN54-208ENST00000583173 ZNF853P0CG23 659 aa28.37■■■□□ 2.13
TSEN54-208ENST00000583173 WWC1Q8IX03 1113 aa28.37■■■□□ 2.13
TSEN54-208ENST00000583173 RC3H1Q5TC82 1133 aaKnown RBP28.36■■■□□ 2.13
TSEN54-208ENST00000583173 DNAJC10Q8IXB1 793 aa28.36■■■□□ 2.13
TSEN54-208ENST00000583173 FMNL2Q96PY5 1086 aa28.36■■■□□ 2.13
TSEN54-208ENST00000583173 HEG1Q9ULI3 1381 aa28.35■■■□□ 2.13
TSEN54-208ENST00000583173 UBR2Q8IWV8 1755 aa28.34■■■□□ 2.13
TSEN54-208ENST00000583173 PSDA5PKW4 1024 aaPredicted RBP28.34■■■□□ 2.13
TSEN54-208ENST00000583173 EIF4A1P60842 406 aaKnown RBP28.34■■■□□ 2.13
TSEN54-208ENST00000583173 NGEFQ8N5V2 710 aa28.34■■■□□ 2.13
TSEN54-208ENST00000583173 TAF1LQ8IZX4 1826 aa28.34■■■□□ 2.13
TSEN54-208ENST00000583173 CYP19A1P11511 503 aaPredicted RBP28.33■■■□□ 2.13
TSEN54-208ENST00000583173 CFAP44Q96MT7 982 aa28.33■■■□□ 2.13
TSEN54-208ENST00000583173 AMIGO3Q86WK7 504 aa28.32■■■□□ 2.12
TSEN54-208ENST00000583173 INTS5Q6P9B9 1019 aaKnown RBP28.31■■■□□ 2.12
TSEN54-208ENST00000583173 TEX13AQ9BXU3 409 aaPredicted RBP28.31■■■□□ 2.12
TSEN54-208ENST00000583173 TSPYL4Q9UJ04 414 aa28.31■■■□□ 2.12
TSEN54-208ENST00000583173 CNTNAP4Q9C0A0 1308 aa28.31■■■□□ 2.12
TSEN54-208ENST00000583173 CICQ96RK0 1608 aaPredicted RBP28.31■■■□□ 2.12
TSEN54-208ENST00000583173 PDGFDQ9GZP0 370 aaPredicted RBP28.3■■■□□ 2.12
TSEN54-208ENST00000583173 C5P01031 1676 aa28.29■■■□□ 2.12
TSEN54-208ENST00000583173 IFT57Q9NWB7 429 aa28.29■■■□□ 2.12
TSEN54-208ENST00000583173 TFCP2L1Q9NZI6 479 aa28.29■■■□□ 2.12
TSEN54-208ENST00000583173 USP16Q9Y5T5 823 aa28.29■■■□□ 2.12
TSEN54-208ENST00000583173 C4BP0C0L5 1744 aa28.29■■■□□ 2.12
TSEN54-208ENST00000583173 PNPLA7Q6ZV29 1317 aa28.28■■■□□ 2.12
TSEN54-208ENST00000583173 PRAMEF22A3QJZ6 481 aa28.28■■■□□ 2.12
TSEN54-208ENST00000583173 SNRPA1P09661 255 aaKnown RBP28.28■■■□□ 2.12
TSEN54-208ENST00000583173 CRKLP46109 303 aaKnown RBP28.28■■■□□ 2.12
TSEN54-208ENST00000583173 CALD1Q05682 793 aaKnown RBP28.28■■■□□ 2.12
TSEN54-208ENST00000583173 WDR63Q8IWG1 891 aa28.28■■■□□ 2.12
TSEN54-208ENST00000583173 TJP1Q07157 1748 aa28.28■■■□□ 2.12
TSEN54-208ENST00000583173 GIGYF1O75420 1035 aaPredicted RBP28.27■■■□□ 2.12
TSEN54-208ENST00000583173 SALL2Q9Y467 1007 aaPredicted RBP28.27■■■□□ 2.12
TSEN54-208ENST00000583173 KDM3BQ7LBC6 1761 aa28.27■■■□□ 2.12
TSEN54-208ENST00000583173 ZNF521Q96K83 1311 aa28.26■■■□□ 2.11
TSEN54-208ENST00000583173 RPS6KA4O75676 772 aa28.26■■■□□ 2.11
TSEN54-208ENST00000583173 GNAI1P63096 354 aa28.26■■■□□ 2.11
TSEN54-208ENST00000583173 AK7Q96M32 723 aa28.26■■■□□ 2.11
TSEN54-208ENST00000583173 IL16Q14005 1332 aa28.25■■■□□ 2.11
TSEN54-208ENST00000583173 SMIM5Q71RC9 77 aa28.25■■■□□ 2.11
TSEN54-208ENST00000583173 COL23A1Q86Y22 540 aaPredicted RBP28.25■■■□□ 2.11
TSEN54-208ENST00000583173 MBIPQ9NS73 344 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms