RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 E9PSI1 815 aa16.14■□□□□ 0.17
CDH8-208ENST00000582980 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
CDH8-208ENST00000582980 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
CDH8-208ENST00000582980 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
CDH8-208ENST00000582980 NHSQ6T4R5 1651 aa16.14■□□□□ 0.17
CDH8-208ENST00000582980 NFATC2IPQ8NCF5 419 aa16.13■□□□□ 0.17
CDH8-208ENST00000582980 SYTL4Q96C24 671 aaPredicted RBP16.13■□□□□ 0.17
CDH8-208ENST00000582980 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
CDH8-208ENST00000582980 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
CDH8-208ENST00000582980 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
CDH8-208ENST00000582980 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
CDH8-208ENST00000582980 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
CDH8-208ENST00000582980 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
CDH8-208ENST00000582980 CHL1O00533 1208 aa16.11■□□□□ 0.17
CDH8-208ENST00000582980 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
CDH8-208ENST00000582980 PRIM1P49642 420 aaKnown RBP16.11■□□□□ 0.17
CDH8-208ENST00000582980 PAPPAQ13219 1627 aa16.1■□□□□ 0.17
CDH8-208ENST00000582980 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
CDH8-208ENST00000582980 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
CDH8-208ENST00000582980 PIGBQ92521 554 aa16.09■□□□□ 0.17
CDH8-208ENST00000582980 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
CDH8-208ENST00000582980 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
CDH8-208ENST00000582980 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
CDH8-208ENST00000582980 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
CDH8-208ENST00000582980 BTAF1O14981 1849 aa16.08■□□□□ 0.16
CDH8-208ENST00000582980 ZNF790Q6PG37 636 aa16.07■□□□□ 0.16
CDH8-208ENST00000582980 TRMT2AQ8IZ69 625 aaKnown RBP16.07■□□□□ 0.16
CDH8-208ENST00000582980 TSR2Q969E8 191 aaKnown RBP16.07■□□□□ 0.16
CDH8-208ENST00000582980 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
CDH8-208ENST00000582980 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
CDH8-208ENST00000582980 UBR2Q8IWV8 1755 aa16.06■□□□□ 0.16
CDH8-208ENST00000582980 KCNQ2O43526 872 aa16.06■□□□□ 0.16
CDH8-208ENST00000582980 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
CDH8-208ENST00000582980 SMARCC1Q92922 1105 aaPredicted RBP16.06■□□□□ 0.16
CDH8-208ENST00000582980 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
CDH8-208ENST00000582980 TRIM37O94972 964 aa16.04■□□□□ 0.16
CDH8-208ENST00000582980 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
CDH8-208ENST00000582980 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
CDH8-208ENST00000582980 FMNL2Q96PY5 1086 aa16.03■□□□□ 0.16
CDH8-208ENST00000582980 KCPQ6ZWJ8 1503 aa16.03■□□□□ 0.16
CDH8-208ENST00000582980 PALLDQ8WX93 1383 aa16.02■□□□□ 0.16
CDH8-208ENST00000582980 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
CDH8-208ENST00000582980 KCNQ3O43525 872 aa16.02■□□□□ 0.16
CDH8-208ENST00000582980 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
CDH8-208ENST00000582980 EP400Q96L91 3159 aa16.01■□□□□ 0.15
CDH8-208ENST00000582980 CT47B1P0C2W7 299 aaPredicted RBP16.01■□□□□ 0.15
CDH8-208ENST00000582980 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
CDH8-208ENST00000582980 ZNF496Q96IT1 587 aaPredicted RBP16.01■□□□□ 0.15
CDH8-208ENST00000582980 TNS1Q9HBL0 1735 aaKnown RBP16.01■□□□□ 0.15
CDH8-208ENST00000582980 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
CDH8-208ENST00000582980 PTCD1O75127 700 aaKnown RBP16■□□□□ 0.15
CDH8-208ENST00000582980 HOXB7P09629 217 aa16■□□□□ 0.15
CDH8-208ENST00000582980 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
CDH8-208ENST00000582980 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
CDH8-208ENST00000582980 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
CDH8-208ENST00000582980 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
CDH8-208ENST00000582980 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
CDH8-208ENST00000582980 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
CDH8-208ENST00000582980 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
CDH8-208ENST00000582980 LAMB4A4D0S4 1761 aa15.99■□□□□ 0.15
CDH8-208ENST00000582980 LY75O60449 1722 aa15.99■□□□□ 0.15
CDH8-208ENST00000582980 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
CDH8-208ENST00000582980 RGPD3A6NKT7 1758 aaPredicted RBP15.98■□□□□ 0.15
CDH8-208ENST00000582980 RGPD4Q7Z3J3 1758 aa15.98■□□□□ 0.15
CDH8-208ENST00000582980 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
CDH8-208ENST00000582980 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
CDH8-208ENST00000582980 C8orf58Q8NAV2 365 aa15.98■□□□□ 0.15
CDH8-208ENST00000582980 C5P01031 1676 aa15.98■□□□□ 0.15
CDH8-208ENST00000582980 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
CDH8-208ENST00000582980 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
CDH8-208ENST00000582980 APBA3O96018 575 aa15.97■□□□□ 0.15
CDH8-208ENST00000582980 SIK1P57059 783 aa15.97■□□□□ 0.15
CDH8-208ENST00000582980 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
CDH8-208ENST00000582980 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
CDH8-208ENST00000582980 TEX13AQ9BXU3 409 aaPredicted RBP15.97■□□□□ 0.15
CDH8-208ENST00000582980 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
CDH8-208ENST00000582980 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
CDH8-208ENST00000582980 CCDC125Q86Z20 511 aa15.96■□□□□ 0.15
CDH8-208ENST00000582980 TJP1Q07157 1748 aa15.95■□□□□ 0.14
CDH8-208ENST00000582980 PLSCR1O15162 318 aa15.95■□□□□ 0.14
CDH8-208ENST00000582980 VAMP4O75379 141 aa15.95■□□□□ 0.14
CDH8-208ENST00000582980 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
CDH8-208ENST00000582980 TSPYL6Q8N831 410 aa15.95■□□□□ 0.14
CDH8-208ENST00000582980 STARD3NLO95772 234 aa15.94■□□□□ 0.14
CDH8-208ENST00000582980 SLC27A3Q5K4L6 730 aa15.94■□□□□ 0.14
CDH8-208ENST00000582980 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
CDH8-208ENST00000582980 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
CDH8-208ENST00000582980 BAG6P46379 1132 aa15.93■□□□□ 0.14
CDH8-208ENST00000582980 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
CDH8-208ENST00000582980 COL5A3P25940 1745 aaPredicted RBP15.92■□□□□ 0.14
CDH8-208ENST00000582980 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
CDH8-208ENST00000582980 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
CDH8-208ENST00000582980 DNAJC10Q8IXB1 793 aa15.92■□□□□ 0.14
CDH8-208ENST00000582980 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
CDH8-208ENST00000582980 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
CDH8-208ENST00000582980 ERBB4Q15303 1308 aa15.92■□□□□ 0.14
CDH8-208ENST00000582980 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
CDH8-208ENST00000582980 RCAN3Q9UKA8 241 aa15.91■□□□□ 0.14
CDH8-208ENST00000582980 USP16Q9Y5T5 823 aa15.91■□□□□ 0.14
CDH8-208ENST00000582980 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms