RNA–Protein interactions for RNA: ENST00000581104.5

NUP85-216, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 2,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-216ENST00000581104 ITGB4P16144 1822 aa12.35□□□□□ -0.43
NUP85-216ENST00000581104 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
NUP85-216ENST00000581104 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
NUP85-216ENST00000581104 MRC1P22897 1456 aa12.34□□□□□ -0.43
NUP85-216ENST00000581104 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
NUP85-216ENST00000581104 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
NUP85-216ENST00000581104 THUMPD2Q9BTF0 503 aaKnown RBP12.34□□□□□ -0.43
NUP85-216ENST00000581104 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
NUP85-216ENST00000581104 PIGBQ92521 554 aa12.34□□□□□ -0.43
NUP85-216ENST00000581104 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
NUP85-216ENST00000581104 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
NUP85-216ENST00000581104 BTAF1O14981 1849 aa12.33□□□□□ -0.44
NUP85-216ENST00000581104 TNS1Q9HBL0 1735 aaKnown RBP12.32□□□□□ -0.44
NUP85-216ENST00000581104 APBA3O96018 575 aa12.32□□□□□ -0.44
NUP85-216ENST00000581104 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
NUP85-216ENST00000581104 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
NUP85-216ENST00000581104 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
NUP85-216ENST00000581104 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
NUP85-216ENST00000581104 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
NUP85-216ENST00000581104 SIPA1L3O60292 1781 aaPredicted RBP12.31□□□□□ -0.44
NUP85-216ENST00000581104 BTBD11A6QL63 1104 aa12.31□□□□□ -0.44
NUP85-216ENST00000581104 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
NUP85-216ENST00000581104 SMARCC1Q92922 1105 aaPredicted RBP12.3□□□□□ -0.44
NUP85-216ENST00000581104 TTC5Q8N0Z6 440 aa12.3□□□□□ -0.44
NUP85-216ENST00000581104 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
NUP85-216ENST00000581104 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
NUP85-216ENST00000581104 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
NUP85-216ENST00000581104 SUPT16HQ9Y5B9 1047 aaKnown RBP12.3□□□□□ -0.44
NUP85-216ENST00000581104 BAG6P46379 1132 aa12.29□□□□□ -0.44
NUP85-216ENST00000581104 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
NUP85-216ENST00000581104 PALLDQ8WX93 1383 aa12.29□□□□□ -0.44
NUP85-216ENST00000581104 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
NUP85-216ENST00000581104 WDR63Q8IWG1 891 aa12.29□□□□□ -0.44
NUP85-216ENST00000581104 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
NUP85-216ENST00000581104 TSPYL4Q9UJ04 414 aa12.28□□□□□ -0.44
NUP85-216ENST00000581104 PLSCR1O15162 318 aa12.27□□□□□ -0.44
NUP85-216ENST00000581104 GNAI1P63096 354 aa12.27□□□□□ -0.44
NUP85-216ENST00000581104 PAPPAQ13219 1627 aa12.27□□□□□ -0.44
NUP85-216ENST00000581104 ZNF790Q6PG37 636 aa12.27□□□□□ -0.44
NUP85-216ENST00000581104 IFT57Q9NWB7 429 aa12.27□□□□□ -0.44
NUP85-216ENST00000581104 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.44
NUP85-216ENST00000581104 IL16Q14005 1332 aa12.27□□□□□ -0.45
NUP85-216ENST00000581104 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
NUP85-216ENST00000581104 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
NUP85-216ENST00000581104 EP400Q96L91 3159 aa12.27□□□□□ -0.45
NUP85-216ENST00000581104 PTCD1O75127 700 aaKnown RBP12.26□□□□□ -0.45
NUP85-216ENST00000581104 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
NUP85-216ENST00000581104 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
NUP85-216ENST00000581104 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
NUP85-216ENST00000581104 RGPD3A6NKT7 1758 aaPredicted RBP12.26□□□□□ -0.45
NUP85-216ENST00000581104 KDM3BQ7LBC6 1761 aa12.26□□□□□ -0.45
NUP85-216ENST00000581104 RGPD4Q7Z3J3 1758 aa12.26□□□□□ -0.45
NUP85-216ENST00000581104 CHL1O00533 1208 aa12.26□□□□□ -0.45
NUP85-216ENST00000581104 KCNQ3O43525 872 aa12.26□□□□□ -0.45
NUP85-216ENST00000581104 LY75O60449 1722 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 LOC102724428A0A0B4J2F2 783 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 SIK1P57059 783 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 EZH2Q15910 746 aaKnown RBP12.25□□□□□ -0.45
NUP85-216ENST00000581104 TXNRD1Q16881 649 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 CAMKK2Q96RR4 588 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
NUP85-216ENST00000581104 KCPQ6ZWJ8 1503 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
NUP85-216ENST00000581104 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
NUP85-216ENST00000581104 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
NUP85-216ENST00000581104 MBIPQ9NS73 344 aa12.24□□□□□ -0.45
NUP85-216ENST00000581104 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
NUP85-216ENST00000581104 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
NUP85-216ENST00000581104 MYH16Q9H6N6 1097 aa12.23□□□□□ -0.45
NUP85-216ENST00000581104 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
NUP85-216ENST00000581104 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
NUP85-216ENST00000581104 E9PSI1 815 aa12.22□□□□□ -0.45
NUP85-216ENST00000581104 KCNQ4P56696 695 aa12.22□□□□□ -0.45
NUP85-216ENST00000581104 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
NUP85-216ENST00000581104 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
NUP85-216ENST00000581104 TSR2Q969E8 191 aaKnown RBP12.22□□□□□ -0.45
NUP85-216ENST00000581104 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
NUP85-216ENST00000581104 PROM2Q8N271 834 aa12.22□□□□□ -0.45
NUP85-216ENST00000581104 FANCIQ9NVI1 1328 aa12.21□□□□□ -0.45
NUP85-216ENST00000581104 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
NUP85-216ENST00000581104 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
NUP85-216ENST00000581104 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
NUP85-216ENST00000581104 FKBP8Q14318 412 aa12.21□□□□□ -0.45
NUP85-216ENST00000581104 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.45
NUP85-216ENST00000581104 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
NUP85-216ENST00000581104 RREB1Q92766 1687 aa12.21□□□□□ -0.45
NUP85-216ENST00000581104 ITPK1Q13572 414 aa12.21□□□□□ -0.46
NUP85-216ENST00000581104 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.46
NUP85-216ENST00000581104 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
NUP85-216ENST00000581104 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
NUP85-216ENST00000581104 TJP1Q07157 1748 aa12.2□□□□□ -0.46
NUP85-216ENST00000581104 C5P01031 1676 aa12.2□□□□□ -0.46
NUP85-216ENST00000581104 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
NUP85-216ENST00000581104 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
NUP85-216ENST00000581104 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
NUP85-216ENST00000581104 NUP188Q5SRE5 1749 aa12.19□□□□□ -0.46
NUP85-216ENST00000581104 PRAMEF22A3QJZ6 481 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms