RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 FOXO3O43524 673 aa17.95■□□□□ 0.46
ITGB4-206ENST00000579662 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
ITGB4-206ENST00000579662 STIM1Q13586 685 aa17.95■□□□□ 0.46
ITGB4-206ENST00000579662 ODF2Q5BJF6 829 aa17.95■□□□□ 0.46
ITGB4-206ENST00000579662 KRT28Q7Z3Y7 464 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 RUFY1Q96T51 708 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
ITGB4-206ENST00000579662 CEBPAP49715 358 aaPredicted RBP17.94■□□□□ 0.46
ITGB4-206ENST00000579662 AK7Q96M32 723 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 SETQ01105 290 aaPredicted RBP17.94■□□□□ 0.46
ITGB4-206ENST00000579662 ATP2B2Q01814 1243 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
ITGB4-206ENST00000579662 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
ITGB4-206ENST00000579662 UHRF1BP1LA0JNW5 1464 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
ITGB4-206ENST00000579662 IDH1O75874 414 aaKnown RBP17.93■□□□□ 0.46
ITGB4-206ENST00000579662 ZNF287Q9HBT7 754 aa17.93■□□□□ 0.46
ITGB4-206ENST00000579662 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
ITGB4-206ENST00000579662 ACEP12821 1306 aa17.93■□□□□ 0.46
ITGB4-206ENST00000579662 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
ITGB4-206ENST00000579662 SPATA32Q96LK8 384 aa17.93■□□□□ 0.46
ITGB4-206ENST00000579662 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
ITGB4-206ENST00000579662 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
ITGB4-206ENST00000579662 ZPR1O75312 459 aa17.92■□□□□ 0.46
ITGB4-206ENST00000579662 PLEKHH1Q9ULM0 1364 aa17.92■□□□□ 0.46
ITGB4-206ENST00000579662 IFNL2Q8IZJ0 200 aa17.92■□□□□ 0.46
ITGB4-206ENST00000579662 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
ITGB4-206ENST00000579662 CASTP20810 708 aaKnown RBP17.92■□□□□ 0.46
ITGB4-206ENST00000579662 RBM5P52756 815 aaKnown RBP eCLIP17.92■□□□□ 0.46
ITGB4-206ENST00000579662 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
ITGB4-206ENST00000579662 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
ITGB4-206ENST00000579662 FLIIQ13045 1269 aa17.91■□□□□ 0.46
ITGB4-206ENST00000579662 IFIT5Q13325 482 aaKnown RBP17.91■□□□□ 0.46
ITGB4-206ENST00000579662 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
ITGB4-206ENST00000579662 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
ITGB4-206ENST00000579662 CBFA2T2O43439 604 aa17.9■□□□□ 0.46
ITGB4-206ENST00000579662 CAGE1Q8TC20 777 aa17.9■□□□□ 0.46
ITGB4-206ENST00000579662 WDR62O43379 1518 aa17.9■□□□□ 0.46
ITGB4-206ENST00000579662 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
ITGB4-206ENST00000579662 HMGB1P09429 215 aaKnown RBP17.9■□□□□ 0.46
ITGB4-206ENST00000579662 PUS7Q96PZ0 661 aaKnown RBP17.9■□□□□ 0.46
ITGB4-206ENST00000579662 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
ITGB4-206ENST00000579662 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.46
ITGB4-206ENST00000579662 TRIM27P14373 513 aa17.89■□□□□ 0.46
ITGB4-206ENST00000579662 CEP131Q9UPN4 1083 aa17.89■□□□□ 0.46
ITGB4-206ENST00000579662 RDXP35241 583 aaKnown RBP17.89■□□□□ 0.45
ITGB4-206ENST00000579662 STK11IPQ8N1F8 1099 aa17.89■□□□□ 0.45
ITGB4-206ENST00000579662 ERCC4Q92889 916 aaPredicted RBP17.89■□□□□ 0.45
ITGB4-206ENST00000579662 MYO6Q9UM54 1294 aa17.89■□□□□ 0.45
ITGB4-206ENST00000579662 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
ITGB4-206ENST00000579662 SERPINC1P01008 464 aa17.89■□□□□ 0.45
ITGB4-206ENST00000579662 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.45
ITGB4-206ENST00000579662 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
ITGB4-206ENST00000579662 SLC5A1P13866 664 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 TXLNBQ8N3L3 684 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 CCDC85AQ96PX6 553 aaPredicted RBP17.88■□□□□ 0.45
ITGB4-206ENST00000579662 EXOC5O00471 708 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 HSP90B2PQ58FF3 399 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 SMARCA5O60264 1052 aaPredicted RBP17.88■□□□□ 0.45
ITGB4-206ENST00000579662 TMOD2Q9NZR1 351 aa17.88■□□□□ 0.45
ITGB4-206ENST00000579662 MAP3K12Q12852 859 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 TMEM132AQ24JP5 1023 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 C20orf194Q5TEA3 1177 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 LUC7LQ9NQ29 371 aaKnown RBP17.87■□□□□ 0.45
ITGB4-206ENST00000579662 MBIPQ9NS73 344 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 MAPKBP1O60336 1514 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 F6X3S4 739 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 SYCP1Q15431 976 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 NUP62CLQ9H1M0 184 aa17.87■□□□□ 0.45
ITGB4-206ENST00000579662 MTERF4Q7Z6M4 381 aaKnown RBP17.86■□□□□ 0.45
ITGB4-206ENST00000579662 PPFIBP1Q86W92 1011 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 CEP57L1Q8IYX8 460 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
ITGB4-206ENST00000579662 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 PRPF40BQ6NWY9 871 aaKnown RBP17.86■□□□□ 0.45
ITGB4-206ENST00000579662 ZSCAN29Q8IWY8 852 aaPredicted RBP17.86■□□□□ 0.45
ITGB4-206ENST00000579662 ANKRD24Q8TF21 1146 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 BMP2KQ9NSY1 1161 aaPredicted RBP17.86■□□□□ 0.45
ITGB4-206ENST00000579662 ABCF2Q9UG63 623 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 MCM4P33991 863 aa17.86■□□□□ 0.45
ITGB4-206ENST00000579662 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
ITGB4-206ENST00000579662 ZNF771Q7L3S4 317 aaPredicted RBP17.85■□□□□ 0.45
ITGB4-206ENST00000579662 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 BOLA2Q9H3K6 86 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 CCDC196A0A1B0GTZ2 297 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 IL27Q8NEV9 243 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 HMGN5P82970 282 aaKnown RBP17.85■□□□□ 0.45
ITGB4-206ENST00000579662 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
ITGB4-206ENST00000579662 A0A087WZG4 1122 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 MSH6P52701 1360 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
ITGB4-206ENST00000579662 BRPF1P55201 1214 aaPredicted RBP17.84■□□□□ 0.45
ITGB4-206ENST00000579662 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
ITGB4-206ENST00000579662 NAPBQ9H115 298 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms