RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 CABP4P57796 275 aa23.55■■□□□ 1.36
MSI2-210ENST00000579505 EN1Q05925 392 aaPredicted RBP23.55■■□□□ 1.36
MSI2-210ENST00000579505 FAM9BQ8IZU0 186 aa23.55■■□□□ 1.36
MSI2-210ENST00000579505 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
MSI2-210ENST00000579505 NUP188Q5SRE5 1749 aa23.55■■□□□ 1.36
MSI2-210ENST00000579505 NFATC2IPQ8NCF5 419 aa23.53■■□□□ 1.36
MSI2-210ENST00000579505 RIPK4P57078 832 aa23.52■■□□□ 1.36
MSI2-210ENST00000579505 ZNF831Q5JPB2 1677 aa23.51■■□□□ 1.35
MSI2-210ENST00000579505 UBR2Q8IWV8 1755 aa23.51■■□□□ 1.35
MSI2-210ENST00000579505 EZH2Q15910 746 aaKnown RBP23.51■■□□□ 1.35
MSI2-210ENST00000579505 MCM10Q7L590 875 aa23.51■■□□□ 1.35
MSI2-210ENST00000579505 APAF1O14727 1248 aa23.5■■□□□ 1.35
MSI2-210ENST00000579505 TEFQ10587 303 aa23.5■■□□□ 1.35
MSI2-210ENST00000579505 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
MSI2-210ENST00000579505 SMARCC1Q92922 1105 aaPredicted RBP23.5■■□□□ 1.35
MSI2-210ENST00000579505 PALLDQ8WX93 1383 aa23.5■■□□□ 1.35
MSI2-210ENST00000579505 DCTN1Q14203 1278 aa23.49■■□□□ 1.35
MSI2-210ENST00000579505 RRP7AQ9Y3A4 280 aaKnown RBP23.49■■□□□ 1.35
MSI2-210ENST00000579505 TAF1LQ8IZX4 1826 aa23.48■■□□□ 1.35
MSI2-210ENST00000579505 TXNRD1Q16881 649 aa23.48■■□□□ 1.35
MSI2-210ENST00000579505 PROM2Q8N271 834 aa23.48■■□□□ 1.35
MSI2-210ENST00000579505 ATG3Q9NT62 314 aa23.48■■□□□ 1.35
MSI2-210ENST00000579505 ASAP1Q9ULH1 1129 aa23.48■■□□□ 1.35
MSI2-210ENST00000579505 CICQ96RK0 1608 aaPredicted RBP23.48■■□□□ 1.35
MSI2-210ENST00000579505 C5P01031 1676 aa23.47■■□□□ 1.35
MSI2-210ENST00000579505 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
MSI2-210ENST00000579505 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
MSI2-210ENST00000579505 NEUROD2Q15784 382 aa23.46■■□□□ 1.35
MSI2-210ENST00000579505 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
MSI2-210ENST00000579505 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
MSI2-210ENST00000579505 SLC27A3Q5K4L6 730 aa23.45■■□□□ 1.34
MSI2-210ENST00000579505 KCPQ6ZWJ8 1503 aa23.44■■□□□ 1.34
MSI2-210ENST00000579505 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
MSI2-210ENST00000579505 TJP1Q07157 1748 aa23.42■■□□□ 1.34
MSI2-210ENST00000579505 LRRC4BQ9NT99 713 aa23.42■■□□□ 1.34
MSI2-210ENST00000579505 COL5A3P25940 1745 aaPredicted RBP23.42■■□□□ 1.34
MSI2-210ENST00000579505 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
MSI2-210ENST00000579505 BTBD11A6QL63 1104 aa23.41■■□□□ 1.34
MSI2-210ENST00000579505 SIK1P57059 783 aa23.41■■□□□ 1.34
MSI2-210ENST00000579505 TAF7Q15545 349 aaPredicted RBP23.41■■□□□ 1.34
MSI2-210ENST00000579505 CCNL1Q9UK58 526 aaPredicted RBP23.41■■□□□ 1.34
MSI2-210ENST00000579505 SLC39A6Q13433 755 aa23.4■■□□□ 1.34
MSI2-210ENST00000579505 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
MSI2-210ENST00000579505 ZNF790Q6PG37 636 aa23.39■■□□□ 1.33
MSI2-210ENST00000579505 TTC5Q8N0Z6 440 aa23.38■■□□□ 1.33
MSI2-210ENST00000579505 C4BP0C0L5 1744 aa23.37■■□□□ 1.33
MSI2-210ENST00000579505 SLC4A9Q96Q91 983 aa23.37■■□□□ 1.33
MSI2-210ENST00000579505 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
MSI2-210ENST00000579505 BABAM1Q9NWV8 329 aa23.37■■□□□ 1.33
MSI2-210ENST00000579505 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
MSI2-210ENST00000579505 PTCD1O75127 700 aaKnown RBP23.36■■□□□ 1.33
MSI2-210ENST00000579505 KCNQ4P56696 695 aa23.36■■□□□ 1.33
MSI2-210ENST00000579505 TUBGCP6Q96RT7 1819 aa23.36■■□□□ 1.33
MSI2-210ENST00000579505 ATP6V1AP38606 617 aa23.35■■□□□ 1.33
MSI2-210ENST00000579505 ITPK1Q13572 414 aa23.34■■□□□ 1.33
MSI2-210ENST00000579505 WWC1Q8IX03 1113 aa23.34■■□□□ 1.33
MSI2-210ENST00000579505 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
MSI2-210ENST00000579505 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
MSI2-210ENST00000579505 KCNQ3O43525 872 aa23.33■■□□□ 1.33
MSI2-210ENST00000579505 NBPF14Q5TI25 921 aa23.33■■□□□ 1.33
MSI2-210ENST00000579505 ZNF496Q96IT1 587 aaPredicted RBP23.33■■□□□ 1.33
MSI2-210ENST00000579505 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
MSI2-210ENST00000579505 HEG1Q9ULI3 1381 aa23.32■■□□□ 1.32
MSI2-210ENST00000579505 FMNL2Q96PY5 1086 aa23.32■■□□□ 1.32
MSI2-210ENST00000579505 ANO8Q9HCE9 1232 aaPredicted RBP23.32■■□□□ 1.32
MSI2-210ENST00000579505 UBR3Q6ZT12 1888 aa23.32■■□□□ 1.32
MSI2-210ENST00000579505 LAMB4A4D0S4 1761 aa23.32■■□□□ 1.32
MSI2-210ENST00000579505 CHL1O00533 1208 aa23.31■■□□□ 1.32
MSI2-210ENST00000579505 LINC00116Q8NCU8 138 aa23.31■■□□□ 1.32
MSI2-210ENST00000579505 AKT1S1Q96B36 256 aa23.31■■□□□ 1.32
MSI2-210ENST00000579505 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
MSI2-210ENST00000579505 TSPYL4Q9UJ04 414 aa23.31■■□□□ 1.32
MSI2-210ENST00000579505 MYH14Q7Z406 1995 aaKnown RBP23.31■■□□□ 1.32
MSI2-210ENST00000579505 ZNF853P0CG23 659 aa23.3■■□□□ 1.32
MSI2-210ENST00000579505 SLC15A2Q16348 729 aa23.29■■□□□ 1.32
MSI2-210ENST00000579505 IFT57Q9NWB7 429 aa23.29■■□□□ 1.32
MSI2-210ENST00000579505 STK32BQ9NY57 414 aa23.29■■□□□ 1.32
MSI2-210ENST00000579505 GNAI1P63096 354 aa23.28■■□□□ 1.32
MSI2-210ENST00000579505 ZNF827Q17R98 1081 aa23.28■■□□□ 1.32
MSI2-210ENST00000579505 WDR63Q8IWG1 891 aa23.28■■□□□ 1.32
MSI2-210ENST00000579505 TEX13AQ9BXU3 409 aaPredicted RBP23.28■■□□□ 1.32
MSI2-210ENST00000579505 IL16Q14005 1332 aa23.28■■□□□ 1.32
MSI2-210ENST00000579505 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
MSI2-210ENST00000579505 DNAJC10Q8IXB1 793 aa23.27■■□□□ 1.32
MSI2-210ENST00000579505 CHMP4AQ9BY43 222 aa23.27■■□□□ 1.32
MSI2-210ENST00000579505 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
MSI2-210ENST00000579505 CNTNAP4Q9C0A0 1308 aa23.27■■□□□ 1.32
MSI2-210ENST00000579505 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
MSI2-210ENST00000579505 CASZ1Q86V15 1759 aa23.26■■□□□ 1.31
MSI2-210ENST00000579505 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
MSI2-210ENST00000579505 RC3H1Q5TC82 1133 aaKnown RBP23.25■■□□□ 1.31
MSI2-210ENST00000579505 SNRPA1P09661 255 aaKnown RBP23.24■■□□□ 1.31
MSI2-210ENST00000579505 CYP19A1P11511 503 aaPredicted RBP23.24■■□□□ 1.31
MSI2-210ENST00000579505 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
MSI2-210ENST00000579505 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
MSI2-210ENST00000579505 AK7Q96M32 723 aa23.23■■□□□ 1.31
MSI2-210ENST00000579505 GIGYF1O75420 1035 aaPredicted RBP23.22■■□□□ 1.31
MSI2-210ENST00000579505 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
MSI2-210ENST00000579505 TFCP2L1Q9NZI6 479 aa23.22■■□□□ 1.31
MSI2-210ENST00000579505 STARD3NLO95772 234 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms