RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 VPS37CA5D8V6 355 aaPredicted RBP12.18□□□□□ -0.46
MSI2-209ENST00000579483 MPHOSPH10O00566 681 aaKnown RBP12.18□□□□□ -0.46
MSI2-209ENST00000579483 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
MSI2-209ENST00000579483 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 BTG4Q9NY30 223 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 POLR3DP05423 398 aaPredicted RBP12.17□□□□□ -0.46
MSI2-209ENST00000579483 DCAF5Q96JK2 942 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 PDE4AP27815 886 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
MSI2-209ENST00000579483 NPATQ14207 1427 aa12.16□□□□□ -0.46
MSI2-209ENST00000579483 YTHDC2Q9H6S0 1430 aaKnown RBP12.16□□□□□ -0.46
MSI2-209ENST00000579483 BAG3O95817 575 aa12.16□□□□□ -0.46
MSI2-209ENST00000579483 ZBTB3Q9H5J0 574 aa12.16□□□□□ -0.46
MSI2-209ENST00000579483 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
MSI2-209ENST00000579483 EIF2AK4Q9P2K8 1649 aaKnown RBP12.16□□□□□ -0.46
MSI2-209ENST00000579483 IL16Q14005 1332 aa12.16□□□□□ -0.46
MSI2-209ENST00000579483 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
MSI2-209ENST00000579483 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
MSI2-209ENST00000579483 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
MSI2-209ENST00000579483 SIRT1Q96EB6 747 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 NF2P35240 595 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 GSTO1P78417 241 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
MSI2-209ENST00000579483 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
MSI2-209ENST00000579483 TTF1Q15361 905 aaPredicted RBP12.15□□□□□ -0.46
MSI2-209ENST00000579483 IP6K1Q92551 441 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 USP21Q9UK80 565 aa12.15□□□□□ -0.46
MSI2-209ENST00000579483 GPTP24298 496 aa12.15□□□□□ -0.47
MSI2-209ENST00000579483 FOXD4L5Q5VV16 416 aaPredicted RBP12.15□□□□□ -0.47
MSI2-209ENST00000579483 OGFOD1Q8N543 542 aa12.15□□□□□ -0.47
MSI2-209ENST00000579483 FOXD4L4Q8WXT5 416 aaPredicted RBP12.15□□□□□ -0.47
MSI2-209ENST00000579483 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.47
MSI2-209ENST00000579483 IMMTQ16891 758 aaKnown RBP12.14□□□□□ -0.47
MSI2-209ENST00000579483 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
MSI2-209ENST00000579483 WASF1Q92558 559 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 PDIA4P13667 645 aaKnown RBP12.14□□□□□ -0.47
MSI2-209ENST00000579483 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
MSI2-209ENST00000579483 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 TNIP1Q15025 636 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 EYA3Q99504 573 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
MSI2-209ENST00000579483 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 C22orf23Q9BZE7 217 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
MSI2-209ENST00000579483 ABCC1P33527 1531 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 LDHAL6AQ6ZMR3 332 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 RNF41Q9H4P4 317 aaPredicted RBP12.13□□□□□ -0.47
MSI2-209ENST00000579483 SLFN5Q08AF3 891 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 DCTN1Q14203 1278 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
MSI2-209ENST00000579483 CFAP43Q8NDM7 1665 aa12.13□□□□□ -0.47
MSI2-209ENST00000579483 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
MSI2-209ENST00000579483 FLIIQ13045 1269 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 HSP90AB2PQ58FF8 381 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
MSI2-209ENST00000579483 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
MSI2-209ENST00000579483 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 EPS15P42566 896 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
MSI2-209ENST00000579483 RABEP1Q15276 862 aa12.12□□□□□ -0.47
MSI2-209ENST00000579483 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
MSI2-209ENST00000579483 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
MSI2-209ENST00000579483 TRAF1Q13077 416 aa12.11□□□□□ -0.47
MSI2-209ENST00000579483 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
MSI2-209ENST00000579483 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
MSI2-209ENST00000579483 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
MSI2-209ENST00000579483 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
MSI2-209ENST00000579483 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
MSI2-209ENST00000579483 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
MSI2-209ENST00000579483 ABCA8O94911 1581 aa12.11□□□□□ -0.47
MSI2-209ENST00000579483 ZNF76P36508 570 aa12.11□□□□□ -0.47
MSI2-209ENST00000579483 PRAG1Q86YV5 1406 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 BCAR3O75815 825 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 LMOD1P29536 600 aaPredicted RBP12.1□□□□□ -0.47
MSI2-209ENST00000579483 NAPBQ9H115 298 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 CHMP5Q9NZZ3 219 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 NUP133Q8WUM0 1156 aa12.1□□□□□ -0.47
MSI2-209ENST00000579483 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
MSI2-209ENST00000579483 TRPC5Q9UL62 973 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms