RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 PROM2Q8N271 834 aa27.66■■■□□ 2.02
SCO1-204ENST00000579396 ATG3Q9NT62 314 aa27.66■■■□□ 2.02
SCO1-204ENST00000579396 ASAP1Q9ULH1 1129 aa27.66■■■□□ 2.02
SCO1-204ENST00000579396 DCTN1Q14203 1278 aa27.64■■■□□ 2.02
SCO1-204ENST00000579396 BTAF1O14981 1849 aa27.64■■■□□ 2.01
SCO1-204ENST00000579396 TOGARAM1Q9Y4F4 1720 aa27.64■■■□□ 2.01
SCO1-204ENST00000579396 ITGB4P16144 1822 aa27.63■■■□□ 2.01
SCO1-204ENST00000579396 RRP7AQ9Y3A4 280 aaKnown RBP27.63■■■□□ 2.01
SCO1-204ENST00000579396 SCN11AQ9UI33 1791 aa27.63■■■□□ 2.01
SCO1-204ENST00000579396 PALLDQ8WX93 1383 aa27.62■■■□□ 2.01
SCO1-204ENST00000579396 TAF7Q15545 349 aaPredicted RBP27.61■■■□□ 2.01
SCO1-204ENST00000579396 NBPF14Q5TI25 921 aa27.61■■■□□ 2.01
SCO1-204ENST00000579396 CCNL1Q9UK58 526 aaPredicted RBP27.6■■■□□ 2.01
SCO1-204ENST00000579396 ADAMTS7Q9UKP4 1686 aa27.59■■■□□ 2.01
SCO1-204ENST00000579396 BTBD11A6QL63 1104 aa27.59■■■□□ 2.01
SCO1-204ENST00000579396 NCBP3Q53F19 620 aaKnown RBP27.59■■■□□ 2.01
SCO1-204ENST00000579396 LOC102724428A0A0B4J2F2 783 aa27.58■■■□□ 2.01
SCO1-204ENST00000579396 SIK1P57059 783 aa27.58■■■□□ 2.01
SCO1-204ENST00000579396 TTC5Q8N0Z6 440 aa27.58■■■□□ 2.01
SCO1-204ENST00000579396 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
SCO1-204ENST00000579396 MRC1P22897 1456 aa27.57■■■□□ 2
SCO1-204ENST00000579396 RBM42Q9BTD8 480 aaKnown RBP27.57■■■□□ 2
SCO1-204ENST00000579396 RGPD3A6NKT7 1758 aaPredicted RBP27.57■■■□□ 2
SCO1-204ENST00000579396 RGPD4Q7Z3J3 1758 aa27.57■■■□□ 2
SCO1-204ENST00000579396 LRRC4BQ9NT99 713 aa27.56■■■□□ 2
SCO1-204ENST00000579396 SLC39A6Q13433 755 aa27.55■■■□□ 2
SCO1-204ENST00000579396 ZNF790Q6PG37 636 aa27.55■■■□□ 2
SCO1-204ENST00000579396 NGEFQ8N5V2 710 aa27.55■■■□□ 2
SCO1-204ENST00000579396 PTCD1O75127 700 aaKnown RBP27.54■■■□□ 2
SCO1-204ENST00000579396 ATP6V1AP38606 617 aa27.54■■■□□ 2
SCO1-204ENST00000579396 THUMPD2Q9BTF0 503 aaKnown RBP27.54■■■□□ 2
SCO1-204ENST00000579396 BABAM1Q9NWV8 329 aa27.54■■■□□ 2
SCO1-204ENST00000579396 CALD1Q05682 793 aaKnown RBP27.53■■■□□ 2
SCO1-204ENST00000579396 CCDC27Q2M243 656 aa27.53■■■□□ 2
SCO1-204ENST00000579396 DLG5Q8TDM6 1919 aa27.51■■■□□ 2
SCO1-204ENST00000579396 KCNQ4P56696 695 aa27.51■■□□□ 1.99
SCO1-204ENST00000579396 VSIG10Q8N0Z9 540 aa27.51■■□□□ 1.99
SCO1-204ENST00000579396 STK32BQ9NY57 414 aa27.5■■□□□ 1.99
SCO1-204ENST00000579396 FMNL2Q96PY5 1086 aa27.49■■□□□ 1.99
SCO1-204ENST00000579396 VIRMAQ69YN4 1812 aaKnown RBP27.48■■□□□ 1.99
SCO1-204ENST00000579396 LY75O60449 1722 aa27.48■■□□□ 1.99
SCO1-204ENST00000579396 MIS18AQ9NYP9 233 aa27.48■■□□□ 1.99
SCO1-204ENST00000579396 SLC4A9Q96Q91 983 aa27.47■■□□□ 1.99
SCO1-204ENST00000579396 TEX13AQ9BXU3 409 aaPredicted RBP27.47■■□□□ 1.99
SCO1-204ENST00000579396 SLC15A2Q16348 729 aa27.46■■□□□ 1.99
SCO1-204ENST00000579396 WWC1Q8IX03 1113 aa27.46■■□□□ 1.99
SCO1-204ENST00000579396 ZNF496Q96IT1 587 aaPredicted RBP27.46■■□□□ 1.99
SCO1-204ENST00000579396 RREB1Q92766 1687 aa27.46■■□□□ 1.99
SCO1-204ENST00000579396 KCNQ3O43525 872 aa27.45■■□□□ 1.98
SCO1-204ENST00000579396 ITPK1Q13572 414 aa27.45■■□□□ 1.98
SCO1-204ENST00000579396 TSPYL4Q9UJ04 414 aa27.45■■□□□ 1.98
SCO1-204ENST00000579396 SRCAPQ6ZRS2 3230 aa27.45■■□□□ 1.98
SCO1-204ENST00000579396 CHL1O00533 1208 aa27.44■■□□□ 1.98
SCO1-204ENST00000579396 AKT1S1Q96B36 256 aa27.44■■□□□ 1.98
SCO1-204ENST00000579396 CFAP44Q96MT7 982 aa27.44■■□□□ 1.98
SCO1-204ENST00000579396 LAS1LQ9Y4W2 734 aaKnown RBP27.44■■□□□ 1.98
SCO1-204ENST00000579396 RC3H1Q5TC82 1133 aaKnown RBP27.43■■□□□ 1.98
SCO1-204ENST00000579396 SALL2Q9Y467 1007 aaPredicted RBP27.43■■□□□ 1.98
SCO1-204ENST00000579396 SIPA1L3O60292 1781 aaPredicted RBP27.43■■□□□ 1.98
SCO1-204ENST00000579396 GNAI1P63096 354 aa27.42■■□□□ 1.98
SCO1-204ENST00000579396 LINC00116Q8NCU8 138 aa27.42■■□□□ 1.98
SCO1-204ENST00000579396 ANO8Q9HCE9 1232 aaPredicted RBP27.42■■□□□ 1.98
SCO1-204ENST00000579396 HEG1Q9ULI3 1381 aa27.42■■□□□ 1.98
SCO1-204ENST00000579396 SENP3-EIF4A1A0A087X0R7 540 aa27.41■■□□□ 1.98
SCO1-204ENST00000579396 STARD3NLO95772 234 aa27.41■■□□□ 1.98
SCO1-204ENST00000579396 SNRPA1P09661 255 aaKnown RBP27.41■■□□□ 1.98
SCO1-204ENST00000579396 R3HDM1Q15032 1099 aaKnown RBP27.41■■□□□ 1.98
SCO1-204ENST00000579396 WDR63Q8IWG1 891 aa27.41■■□□□ 1.98
SCO1-204ENST00000579396 IFT57Q9NWB7 429 aa27.41■■□□□ 1.98
SCO1-204ENST00000579396 TFCP2L1Q9NZI6 479 aa27.41■■□□□ 1.98
SCO1-204ENST00000579396 EIF4A1P60842 406 aaKnown RBP27.4■■□□□ 1.98
SCO1-204ENST00000579396 DNAJC10Q8IXB1 793 aa27.4■■□□□ 1.98
SCO1-204ENST00000579396 AK7Q96M32 723 aa27.4■■□□□ 1.98
SCO1-204ENST00000579396 NUP188Q5SRE5 1749 aa27.4■■□□□ 1.98
SCO1-204ENST00000579396 KCPQ6ZWJ8 1503 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 ZNF831Q5JPB2 1677 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 ZNF853P0CG23 659 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 ZNF827Q17R98 1081 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 FLAD1Q8NFF5 587 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 IL16Q14005 1332 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 PAPPAQ13219 1627 aa27.38■■□□□ 1.97
SCO1-204ENST00000579396 PSDA5PKW4 1024 aaPredicted RBP27.37■■□□□ 1.97
SCO1-204ENST00000579396 CYP19A1P11511 503 aaPredicted RBP27.37■■□□□ 1.97
SCO1-204ENST00000579396 CNTNAP4Q9C0A0 1308 aa27.37■■□□□ 1.97
SCO1-204ENST00000579396 CRKLP46109 303 aaKnown RBP27.35■■□□□ 1.97
SCO1-204ENST00000579396 GIGYF1O75420 1035 aaPredicted RBP27.34■■□□□ 1.97
SCO1-204ENST00000579396 RTCBQ9Y3I0 505 aaKnown RBP27.34■■□□□ 1.97
SCO1-204ENST00000579396 GNPATO15228 680 aa27.33■■□□□ 1.97
SCO1-204ENST00000579396 RPS6KA4O75676 772 aa27.33■■□□□ 1.97
SCO1-204ENST00000579396 MBIPQ9NS73 344 aa27.33■■□□□ 1.97
SCO1-204ENST00000579396 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
SCO1-204ENST00000579396 CCDC87Q9NVE4 849 aa27.32■■□□□ 1.96
SCO1-204ENST00000579396 USP16Q9Y5T5 823 aa27.32■■□□□ 1.96
SCO1-204ENST00000579396 UBR2Q8IWV8 1755 aa27.32■■□□□ 1.96
SCO1-204ENST00000579396 SSFA2P28290 1259 aa27.31■■□□□ 1.96
SCO1-204ENST00000579396 C5P01031 1676 aa27.3■■□□□ 1.96
SCO1-204ENST00000579396 TRAPPC3LQ5T215 181 aa27.3■■□□□ 1.96
SCO1-204ENST00000579396 LRP5O75197 1615 aa27.3■■□□□ 1.96
SCO1-204ENST00000579396 TAF1LQ8IZX4 1826 aa27.3■■□□□ 1.96
SCO1-204ENST00000579396 ADRA2BP18089 450 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms