RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	RGPD4	Q7Z3J3	1758 aa		7.3	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	PALLD	Q8WX93	1383 aa		7.3	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	NUP188	Q5SRE5	1749 aa		7.3	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	IGSF1	Q8N6C5	1336 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	KAT6B	Q8WYB5	2073 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	DIAPH1	O60610	1272 aa	Known RBP	7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	KCNQ4	P56696	695 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	CABP4	P57796	275 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	NKX1-1	Q15270	411 aa	Predicted RBP	7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	ZNF827	Q17R98	1081 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	DCAF5	Q96JK2	942 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	ARX	Q96QS3	562 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	FARP1	Q9Y4F1	1045 aa	Predicted RBP	7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	PLEKHG2	Q9H7P9	1386 aa		7.29	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	EP400	Q96L91	3159 aa		7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	ERVV-2	B6SEH9	535 aa		7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	U2SURP	O15042	1029 aa	Known RBP	7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	ATP6V1A	P38606	617 aa		7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	PIGB	Q92521	554 aa		7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	NUDC	Q9Y266	331 aa		7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	SBF2	Q86WG5	1849 aa		7.28	□□□□□ -1.24
ARHGAP28-208	ENST00000577524	LOC102724428	A0A0B4J2F2	783 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	NEFM	P07197	916 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	HMOX1	P09601	288 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	IL13	P35225	146 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	SIK1	P57059	783 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	BTAF1	O14981	1849 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PNPLA7	Q6ZV29	1317 aa		7.27	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	NPC1L1	Q9UHC9	1359 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PER1	O15534	1290 aa	Predicted RBP	7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PHF14	O94880	888 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	AKAP4	Q5JQC9	854 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	AEBP1	Q8IUX7	1158 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	ASAP1	Q9ULH1	1129 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	DOT1L	Q8TEK3	1739 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	ANKRD26	Q9UPS8	1709 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	NCAPD2	Q15021	1401 aa		7.26	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	RGPD2	P0DJD1	1756 aa		7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	MAP2	P11137	1827 aa	Known RBP	7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	GNPAT	O15228	680 aa		7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	CD44	P16070	742 aa	Known RBP	7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PTGER2	P43116	358 aa		7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	GPR162	Q16538	588 aa		7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	COL23A1	Q86Y22	540 aa	Predicted RBP	7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PELP1	Q8IZL8	1130 aa	Known RBP	7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	SYT17	Q9BSW7	474 aa		7.25	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	SPDYE4	A6NLX3	237 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PTCD1	O75127	700 aa	Known RBP	7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	YY1	P25490	414 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	SSFA2	P28290	1259 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	TRAPPC3L	Q5T215	181 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	MSL1	Q68DK7	614 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	TTC5	Q8N0Z6	440 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	GAS2L2	Q8NHY3	880 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	ATG3	Q9NT62	314 aa		7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	RTCB	Q9Y3I0	505 aa	Known RBP	7.24	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.23	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.23	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	TEF	Q10587	303 aa		7.23	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	NPM2	Q86SE8	214 aa	Known RBP	7.23	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	NFATC2IP	Q8NCF5	419 aa		7.23	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	KDR	P35968	1356 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PKD1L3	Q7Z443	1732 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	RNMT	O43148	476 aa	Known RBP	7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	RFC4	P35249	363 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	LINC00116	Q8NCU8	138 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	RTF1	Q92541	710 aa	Known RBP	7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	SGIP1	Q9BQI5	828 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	SLC52A2	Q9HAB3	445 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	CREBZF	Q9NS37	354 aa		7.22	□□□□□ -1.25
ARHGAP28-208	ENST00000577524	PAPPA	Q13219	1627 aa		7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	GNAT3	A8MTJ3	354 aa		7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	PPP2R1A	P30153	589 aa		7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	ITPK1	Q13572	414 aa		7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	MTHFSD	Q2M296	383 aa	Known RBP	7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	RC3H1	Q5TC82	1133 aa	Known RBP	7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	NLGN1	Q8N2Q7	840 aa		7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	PNN	Q9H307	717 aa	Known RBP	7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	SHANK3	Q9BYB0	1731 aa		7.21	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	CASZ1	Q86V15	1759 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	GRIN3B	O60391	1043 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	RPS6KA4	O75676	772 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	PRKAR2B	P31323	418 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	LGR6	Q9HBX8	967 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	CD2AP	Q9Y5K6	639 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	PARP3	Q9Y6F1	533 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	CNTNAP4	Q9C0A0	1308 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	MAP3K5	Q99683	1374 aa		7.2	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	KDM6A	O15550	1401 aa	Predicted RBP	7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	ZPR1	O75312	459 aa		7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	FCHSD2	O94868	740 aa		7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	STARD3NL	O95772	234 aa		7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	ZEB1	P37275	1124 aa	Predicted RBP	7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	CRKL	P46109	303 aa	Known RBP	7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	SLC39A6	Q13433	755 aa		7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	TEX13A	Q9BXU3	409 aa	Predicted RBP	7.19	□□□□□ -1.26
ARHGAP28-208	ENST00000577524	MAPK8IP3	Q9UPT6	1336 aa		7.19	□□□□□ -1.26

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