RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 MRC1P22897 1456 aa26.42■■□□□ 1.82
SUPT4H1-202ENST00000577396 TXNRD1Q16881 649 aa26.42■■□□□ 1.82
SUPT4H1-202ENST00000577396 RGPD3A6NKT7 1758 aaPredicted RBP26.42■■□□□ 1.82
SUPT4H1-202ENST00000577396 RGPD4Q7Z3J3 1758 aa26.42■■□□□ 1.82
SUPT4H1-202ENST00000577396 VIRMAQ69YN4 1812 aaKnown RBP26.41■■□□□ 1.82
SUPT4H1-202ENST00000577396 DLG5Q8TDM6 1919 aa26.41■■□□□ 1.82
SUPT4H1-202ENST00000577396 APAF1O14727 1248 aa26.4■■□□□ 1.82
SUPT4H1-202ENST00000577396 FAM9BQ8IZU0 186 aa26.4■■□□□ 1.82
SUPT4H1-202ENST00000577396 SMARCC1Q92922 1105 aaPredicted RBP26.4■■□□□ 1.82
SUPT4H1-202ENST00000577396 RRP7AQ9Y3A4 280 aaKnown RBP26.4■■□□□ 1.82
SUPT4H1-202ENST00000577396 LRRC4BQ9NT99 713 aa26.39■■□□□ 1.81
SUPT4H1-202ENST00000577396 PALLDQ8WX93 1383 aa26.38■■□□□ 1.81
SUPT4H1-202ENST00000577396 TEFQ10587 303 aa26.38■■□□□ 1.81
SUPT4H1-202ENST00000577396 NEUROD2Q15784 382 aa26.37■■□□□ 1.81
SUPT4H1-202ENST00000577396 TRIM35Q9UPQ4 493 aa26.37■■□□□ 1.81
SUPT4H1-202ENST00000577396 SLC27A3Q5K4L6 730 aa26.36■■□□□ 1.81
SUPT4H1-202ENST00000577396 LY75O60449 1722 aa26.36■■□□□ 1.81
SUPT4H1-202ENST00000577396 THUMPD2Q9BTF0 503 aaKnown RBP26.36■■□□□ 1.81
SUPT4H1-202ENST00000577396 RREB1Q92766 1687 aa26.34■■□□□ 1.81
SUPT4H1-202ENST00000577396 KCNQ4P56696 695 aa26.34■■□□□ 1.81
SUPT4H1-202ENST00000577396 SLC39A6Q13433 755 aa26.33■■□□□ 1.81
SUPT4H1-202ENST00000577396 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.8
SUPT4H1-202ENST00000577396 LOC102724428A0A0B4J2F2 783 aa26.32■■□□□ 1.8
SUPT4H1-202ENST00000577396 SIK1P57059 783 aa26.32■■□□□ 1.8
SUPT4H1-202ENST00000577396 LMOD3Q0VAK6 560 aa26.32■■□□□ 1.8
SUPT4H1-202ENST00000577396 SLC4A9Q96Q91 983 aa26.32■■□□□ 1.8
SUPT4H1-202ENST00000577396 CCNL1Q9UK58 526 aaPredicted RBP26.32■■□□□ 1.8
SUPT4H1-202ENST00000577396 TAF7Q15545 349 aaPredicted RBP26.32■■□□□ 1.8
SUPT4H1-202ENST00000577396 NUP188Q5SRE5 1749 aa26.29■■□□□ 1.8
SUPT4H1-202ENST00000577396 BTBD11A6QL63 1104 aa26.29■■□□□ 1.8
SUPT4H1-202ENST00000577396 ZNF790Q6PG37 636 aa26.29■■□□□ 1.8
SUPT4H1-202ENST00000577396 PTCD1O75127 700 aaKnown RBP26.28■■□□□ 1.8
SUPT4H1-202ENST00000577396 NCBP3Q53F19 620 aaKnown RBP26.28■■□□□ 1.8
SUPT4H1-202ENST00000577396 RBM42Q9BTD8 480 aaKnown RBP26.28■■□□□ 1.8
SUPT4H1-202ENST00000577396 SENP3-EIF4A1A0A087X0R7 540 aa26.27■■□□□ 1.8
SUPT4H1-202ENST00000577396 KCNQ3O43525 872 aa26.27■■□□□ 1.8
SUPT4H1-202ENST00000577396 ANO8Q9HCE9 1232 aaPredicted RBP26.27■■□□□ 1.8
SUPT4H1-202ENST00000577396 PAPPAQ13219 1627 aa26.27■■□□□ 1.8
SUPT4H1-202ENST00000577396 ATP6V1AP38606 617 aa26.26■■□□□ 1.79
SUPT4H1-202ENST00000577396 ITPK1Q13572 414 aa26.26■■□□□ 1.79
SUPT4H1-202ENST00000577396 MIS18AQ9NYP9 233 aa26.26■■□□□ 1.79
SUPT4H1-202ENST00000577396 CCDC27Q2M243 656 aa26.25■■□□□ 1.79
SUPT4H1-202ENST00000577396 KCPQ6ZWJ8 1503 aa26.25■■□□□ 1.79
SUPT4H1-202ENST00000577396 NBPF14Q5TI25 921 aa26.25■■□□□ 1.79
SUPT4H1-202ENST00000577396 AKT1S1Q96B36 256 aa26.24■■□□□ 1.79
SUPT4H1-202ENST00000577396 ZNF496Q96IT1 587 aaPredicted RBP26.24■■□□□ 1.79
SUPT4H1-202ENST00000577396 TTC5Q8N0Z6 440 aa26.23■■□□□ 1.79
SUPT4H1-202ENST00000577396 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
SUPT4H1-202ENST00000577396 SLC15A2Q16348 729 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 WWC1Q8IX03 1113 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 VSIG10Q8N0Z9 540 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 LINC00116Q8NCU8 138 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 BABAM1Q9NWV8 329 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 UBR2Q8IWV8 1755 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 CHL1O00533 1208 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 ZNF827Q17R98 1081 aa26.21■■□□□ 1.79
SUPT4H1-202ENST00000577396 HMGB2P26583 209 aaKnown RBP26.2■■□□□ 1.78
SUPT4H1-202ENST00000577396 TAF1LQ8IZX4 1826 aa26.2■■□□□ 1.78
SUPT4H1-202ENST00000577396 FMNL2Q96PY5 1086 aa26.19■■□□□ 1.78
SUPT4H1-202ENST00000577396 R3HDM1Q15032 1099 aaKnown RBP26.18■■□□□ 1.78
SUPT4H1-202ENST00000577396 STK32BQ9NY57 414 aa26.18■■□□□ 1.78
SUPT4H1-202ENST00000577396 HEG1Q9ULI3 1381 aa26.18■■□□□ 1.78
SUPT4H1-202ENST00000577396 ZNF853P0CG23 659 aa26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 DNAJC10Q8IXB1 793 aa26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 NGEFQ8N5V2 710 aa26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 SALL2Q9Y467 1007 aaPredicted RBP26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 CFAP44Q96MT7 982 aa26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 TSPYL4Q9UJ04 414 aa26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 C5P01031 1676 aa26.17■■□□□ 1.78
SUPT4H1-202ENST00000577396 EIF4A1P60842 406 aaKnown RBP26.16■■□□□ 1.78
SUPT4H1-202ENST00000577396 PSDA5PKW4 1024 aaPredicted RBP26.15■■□□□ 1.78
SUPT4H1-202ENST00000577396 CICQ96RK0 1608 aaPredicted RBP26.15■■□□□ 1.78
SUPT4H1-202ENST00000577396 KDM3BQ7LBC6 1761 aa26.15■■□□□ 1.78
SUPT4H1-202ENST00000577396 CALD1Q05682 793 aaKnown RBP26.14■■□□□ 1.78
SUPT4H1-202ENST00000577396 RC3H1Q5TC82 1133 aaKnown RBP26.14■■□□□ 1.78
SUPT4H1-202ENST00000577396 CYP19A1P11511 503 aaPredicted RBP26.14■■□□□ 1.77
SUPT4H1-202ENST00000577396 IFT57Q9NWB7 429 aa26.14■■□□□ 1.77
SUPT4H1-202ENST00000577396 C4BP0C0L5 1744 aa26.13■■□□□ 1.77
SUPT4H1-202ENST00000577396 TJP1Q07157 1748 aa26.13■■□□□ 1.77
SUPT4H1-202ENST00000577396 LAS1LQ9Y4W2 734 aaKnown RBP26.13■■□□□ 1.77
SUPT4H1-202ENST00000577396 CNTNAP4Q9C0A0 1308 aa26.12■■□□□ 1.77
SUPT4H1-202ENST00000577396 PRAMEF22A3QJZ6 481 aa26.12■■□□□ 1.77
SUPT4H1-202ENST00000577396 SNRPA1P09661 255 aaKnown RBP26.12■■□□□ 1.77
SUPT4H1-202ENST00000577396 AMIGO3Q86WK7 504 aa26.12■■□□□ 1.77
SUPT4H1-202ENST00000577396 TFCP2L1Q9NZI6 479 aa26.12■■□□□ 1.77
SUPT4H1-202ENST00000577396 COL5A3P25940 1745 aaPredicted RBP26.11■■□□□ 1.77
SUPT4H1-202ENST00000577396 CRKLP46109 303 aaKnown RBP26.11■■□□□ 1.77
SUPT4H1-202ENST00000577396 INTS5Q6P9B9 1019 aaKnown RBP26.11■■□□□ 1.77
SUPT4H1-202ENST00000577396 WDR63Q8IWG1 891 aa26.11■■□□□ 1.77
SUPT4H1-202ENST00000577396 TEX13AQ9BXU3 409 aaPredicted RBP26.11■■□□□ 1.77
SUPT4H1-202ENST00000577396 USP16Q9Y5T5 823 aa26.11■■□□□ 1.77
SUPT4H1-202ENST00000577396 GIGYF1O75420 1035 aaPredicted RBP26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 GNAI1P63096 354 aa26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 PDGFDQ9GZP0 370 aaPredicted RBP26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 MBIPQ9NS73 344 aa26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 MYH14Q7Z406 1995 aaKnown RBP26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 ZNF521Q96K83 1311 aa26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 AK7Q96M32 723 aa26.1■■□□□ 1.77
SUPT4H1-202ENST00000577396 SRCAPQ6ZRS2 3230 aa26.09■■□□□ 1.77
SUPT4H1-202ENST00000577396 IL16Q14005 1332 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms