RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 NOL7Q9UMY1 257 aaKnown RBP10.35□□□□□ -0.75
RPAIN-215ENST00000575112 PA2G4Q9UQ80 394 aaKnown RBP10.35□□□□□ -0.75
RPAIN-215ENST00000575112 SBNO2Q9Y2G9 1366 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 TCHHQ07283 1943 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 ZNF445P59923 1031 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 PALD1Q9ULE6 856 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
RPAIN-215ENST00000575112 PNMA6EA0A0J9YXQ4 647 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
RPAIN-215ENST00000575112 CT47B1P0C2W7 299 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-215ENST00000575112 PROSER2Q86WR7 435 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-215ENST00000575112 PDLIM2Q96JY6 352 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 ORAI2Q96SN7 254 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 CCDC8Q9H0W5 538 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-215ENST00000575112 DEPDC5O75140 1603 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 STK3Q13188 491 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 LRRCC1Q9C099 1032 aa10.34□□□□□ -0.75
RPAIN-215ENST00000575112 MYO3AQ8NEV4 1616 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 VPS37CA5D8V6 355 aaPredicted RBP10.33□□□□□ -0.76
RPAIN-215ENST00000575112 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 CEP85Q6P2H3 762 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 SYTL4Q96C24 671 aaPredicted RBP10.33□□□□□ -0.76
RPAIN-215ENST00000575112 KAT6BQ8WYB5 2073 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 IGSF3O75054 1194 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 REC8O95072 547 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
RPAIN-215ENST00000575112 KLHDC4Q8TBB5 520 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 NDUFB9Q9Y6M9 179 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
RPAIN-215ENST00000575112 IL25Q9H293 177 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 DIAPH3Q9NSV4 1193 aa10.33□□□□□ -0.76
RPAIN-215ENST00000575112 IFIT2P09913 472 aaKnown RBP10.32□□□□□ -0.76
RPAIN-215ENST00000575112 CWF19L2Q2TBE0 894 aaKnown RBP10.32□□□□□ -0.76
RPAIN-215ENST00000575112 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.32□□□□□ -0.76
RPAIN-215ENST00000575112 STRN4Q9NRL3 753 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 ZKSCAN5Q9Y2L8 839 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 A0A0U1RQG5 324 aaPredicted RBP10.32□□□□□ -0.76
RPAIN-215ENST00000575112 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 NEUROD6Q96NK8 337 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 TTC12Q9H892 705 aaPredicted RBP10.32□□□□□ -0.76
RPAIN-215ENST00000575112 CAMSAP1Q5T5Y3 1602 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 PRAMEF22A3QJZ6 481 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 CLEC17AQ6ZS10 378 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 SRCIN1Q9C0H9 1055 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 MED14O60244 1454 aa10.32□□□□□ -0.76
RPAIN-215ENST00000575112 VWDEQ8N2E2 1590 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 PHF8Q9UPP1 1060 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.31□□□□□ -0.76
RPAIN-215ENST00000575112 MSH6P52701 1360 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 ABCC4O15439 1325 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 ERC2O15083 957 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 FIBPO43427 364 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 CEBPZQ03701 1054 aaKnown RBP10.31□□□□□ -0.76
RPAIN-215ENST00000575112 RABEP1Q15276 862 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
RPAIN-215ENST00000575112 GLI2P10070 1586 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 TNRQ92752 1358 aa10.31□□□□□ -0.76
RPAIN-215ENST00000575112 ZNF500O60304 480 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-215ENST00000575112 MX1P20591 662 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 DNAJC2Q99543 621 aaKnown RBP10.3□□□□□ -0.76
RPAIN-215ENST00000575112 BOLA2Q9H3K6 86 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 EFCAB6Q5THR3 1501 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 LRSAM1Q6UWE0 723 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 RPAP2Q8IXW5 612 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-215ENST00000575112 TMX3Q96JJ7 454 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 NSD2O96028 1365 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-215ENST00000575112 ANKRD44Q8N8A2 993 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 DCTPP1Q9H773 170 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 IL16Q14005 1332 aa10.3□□□□□ -0.76
RPAIN-215ENST00000575112 INO80Q9ULG1 1556 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-215ENST00000575112 GNAI3P08754 354 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 HSP90B1P14625 803 aaKnown RBP10.29□□□□□ -0.76
RPAIN-215ENST00000575112 PDE1AP54750 535 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 ZNF710Q8N1W2 664 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 UNC5CLQ8IV45 518 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 ADGRB3O60242 1522 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 CBX1P83916 185 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 NBPF6Q5VWK0 638 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 AACSQ86V21 672 aa10.29□□□□□ -0.76
RPAIN-215ENST00000575112 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms