RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PALLDQ8WX93 1383 aa22.79■■□□□ 1.24
LITAF-212ENST00000573332 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
LITAF-212ENST00000573332 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
LITAF-212ENST00000573332 TEFQ10587 303 aa22.78■■□□□ 1.24
LITAF-212ENST00000573332 RREB1Q92766 1687 aa22.77■■□□□ 1.24
LITAF-212ENST00000573332 RIPK4P57078 832 aa22.77■■□□□ 1.24
LITAF-212ENST00000573332 MCM10Q7L590 875 aa22.76■■□□□ 1.23
LITAF-212ENST00000573332 HMGB2P26583 209 aaKnown RBP22.75■■□□□ 1.23
LITAF-212ENST00000573332 LMOD3Q0VAK6 560 aa22.75■■□□□ 1.23
LITAF-212ENST00000573332 LRRC4BQ9NT99 713 aa22.75■■□□□ 1.23
LITAF-212ENST00000573332 DCTN1Q14203 1278 aa22.74■■□□□ 1.23
LITAF-212ENST00000573332 LY75O60449 1722 aa22.74■■□□□ 1.23
LITAF-212ENST00000573332 LOC102724428A0A0B4J2F2 783 aa22.73■■□□□ 1.23
LITAF-212ENST00000573332 APAF1O14727 1248 aa22.73■■□□□ 1.23
LITAF-212ENST00000573332 SIK1P57059 783 aa22.73■■□□□ 1.23
LITAF-212ENST00000573332 CCNL1Q9UK58 526 aaPredicted RBP22.73■■□□□ 1.23
LITAF-212ENST00000573332 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
LITAF-212ENST00000573332 NBPF14Q5TI25 921 aa22.72■■□□□ 1.23
LITAF-212ENST00000573332 MIER1Q8N108 512 aa22.72■■□□□ 1.23
LITAF-212ENST00000573332 RRP7AQ9Y3A4 280 aaKnown RBP22.72■■□□□ 1.23
LITAF-212ENST00000573332 TRIM35Q9UPQ4 493 aa22.71■■□□□ 1.23
LITAF-212ENST00000573332 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
LITAF-212ENST00000573332 TAF7Q15545 349 aaPredicted RBP22.7■■□□□ 1.22
LITAF-212ENST00000573332 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
LITAF-212ENST00000573332 SLC39A6Q13433 755 aa22.69■■□□□ 1.22
LITAF-212ENST00000573332 NEUROD2Q15784 382 aa22.69■■□□□ 1.22
LITAF-212ENST00000573332 ZNF790Q6PG37 636 aa22.69■■□□□ 1.22
LITAF-212ENST00000573332 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
LITAF-212ENST00000573332 BTBD11A6QL63 1104 aa22.68■■□□□ 1.22
LITAF-212ENST00000573332 KCNQ4P56696 695 aa22.68■■□□□ 1.22
LITAF-212ENST00000573332 SLC4A9Q96Q91 983 aa22.68■■□□□ 1.22
LITAF-212ENST00000573332 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
LITAF-212ENST00000573332 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
LITAF-212ENST00000573332 ATP6V1AP38606 617 aa22.67■■□□□ 1.22
LITAF-212ENST00000573332 RBM42Q9BTD8 480 aaKnown RBP22.67■■□□□ 1.22
LITAF-212ENST00000573332 THUMPD2Q9BTF0 503 aaKnown RBP22.67■■□□□ 1.22
LITAF-212ENST00000573332 ANO8Q9HCE9 1232 aaPredicted RBP22.67■■□□□ 1.22
LITAF-212ENST00000573332 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
LITAF-212ENST00000573332 ZNF831Q5JPB2 1677 aa22.66■■□□□ 1.22
LITAF-212ENST00000573332 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
LITAF-212ENST00000573332 SLC15A2Q16348 729 aa22.66■■□□□ 1.22
LITAF-212ENST00000573332 TTC5Q8N0Z6 440 aa22.66■■□□□ 1.22
LITAF-212ENST00000573332 AKT1S1Q96B36 256 aa22.66■■□□□ 1.22
LITAF-212ENST00000573332 BABAM1Q9NWV8 329 aa22.66■■□□□ 1.22
LITAF-212ENST00000573332 ITPK1Q13572 414 aa22.65■■□□□ 1.22
LITAF-212ENST00000573332 CCDC27Q2M243 656 aa22.65■■□□□ 1.22
LITAF-212ENST00000573332 VSIG10Q8N0Z9 540 aa22.65■■□□□ 1.22
LITAF-212ENST00000573332 STK32BQ9NY57 414 aa22.65■■□□□ 1.22
LITAF-212ENST00000573332 KCPQ6ZWJ8 1503 aa22.64■■□□□ 1.21
LITAF-212ENST00000573332 NGEFQ8N5V2 710 aa22.63■■□□□ 1.21
LITAF-212ENST00000573332 ZNF827Q17R98 1081 aa22.62■■□□□ 1.21
LITAF-212ENST00000573332 LINC00116Q8NCU8 138 aa22.62■■□□□ 1.21
LITAF-212ENST00000573332 ZNF496Q96IT1 587 aaPredicted RBP22.62■■□□□ 1.21
LITAF-212ENST00000573332 KCNQ3O43525 872 aa22.61■■□□□ 1.21
LITAF-212ENST00000573332 R3HDM1Q15032 1099 aaKnown RBP22.61■■□□□ 1.21
LITAF-212ENST00000573332 FMNL2Q96PY5 1086 aa22.61■■□□□ 1.21
LITAF-212ENST00000573332 HEG1Q9ULI3 1381 aa22.61■■□□□ 1.21
LITAF-212ENST00000573332 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
LITAF-212ENST00000573332 CALD1Q05682 793 aaKnown RBP22.6■■□□□ 1.21
LITAF-212ENST00000573332 RC3H1Q5TC82 1133 aaKnown RBP22.6■■□□□ 1.21
LITAF-212ENST00000573332 UBR2Q8IWV8 1755 aa22.6■■□□□ 1.21
LITAF-212ENST00000573332 CHL1O00533 1208 aa22.59■■□□□ 1.21
LITAF-212ENST00000573332 TEX13AQ9BXU3 409 aaPredicted RBP22.59■■□□□ 1.21
LITAF-212ENST00000573332 MIS18AQ9NYP9 233 aa22.59■■□□□ 1.21
LITAF-212ENST00000573332 C5P01031 1676 aa22.58■■□□□ 1.2
LITAF-212ENST00000573332 CNTNAP4Q9C0A0 1308 aa22.57■■□□□ 1.2
LITAF-212ENST00000573332 PSDA5PKW4 1024 aaPredicted RBP22.57■■□□□ 1.2
LITAF-212ENST00000573332 WWC1Q8IX03 1113 aa22.57■■□□□ 1.2
LITAF-212ENST00000573332 DNAJC10Q8IXB1 793 aa22.57■■□□□ 1.2
LITAF-212ENST00000573332 CFAP44Q96MT7 982 aa22.57■■□□□ 1.2
LITAF-212ENST00000573332 TSPYL4Q9UJ04 414 aa22.57■■□□□ 1.2
LITAF-212ENST00000573332 TAF1LQ8IZX4 1826 aa22.57■■□□□ 1.2
LITAF-212ENST00000573332 ZNF853P0CG23 659 aa22.56■■□□□ 1.2
LITAF-212ENST00000573332 EIF4A1P60842 406 aaKnown RBP22.56■■□□□ 1.2
LITAF-212ENST00000573332 TFCP2L1Q9NZI6 479 aa22.56■■□□□ 1.2
LITAF-212ENST00000573332 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
LITAF-212ENST00000573332 SNRPA1P09661 255 aaKnown RBP22.55■■□□□ 1.2
LITAF-212ENST00000573332 CYP19A1P11511 503 aaPredicted RBP22.55■■□□□ 1.2
LITAF-212ENST00000573332 AK7Q96M32 723 aa22.55■■□□□ 1.2
LITAF-212ENST00000573332 IFT57Q9NWB7 429 aa22.55■■□□□ 1.2
LITAF-212ENST00000573332 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
LITAF-212ENST00000573332 TJP1Q07157 1748 aa22.54■■□□□ 1.2
LITAF-212ENST00000573332 KDM3BQ7LBC6 1761 aa22.53■■□□□ 1.2
LITAF-212ENST00000573332 STARD3NLO95772 234 aa22.53■■□□□ 1.2
LITAF-212ENST00000573332 CRKLP46109 303 aaKnown RBP22.53■■□□□ 1.2
LITAF-212ENST00000573332 GNAI1P63096 354 aa22.53■■□□□ 1.2
LITAF-212ENST00000573332 IL16Q14005 1332 aa22.53■■□□□ 1.2
LITAF-212ENST00000573332 PNPLA7Q6ZV29 1317 aa22.53■■□□□ 1.2
LITAF-212ENST00000573332 COL5A3P25940 1745 aaPredicted RBP22.52■■□□□ 1.2
LITAF-212ENST00000573332 RPS6KA4O75676 772 aa22.52■■□□□ 1.2
LITAF-212ENST00000573332 SSFA2P28290 1259 aa22.52■■□□□ 1.2
LITAF-212ENST00000573332 INTS5Q6P9B9 1019 aaKnown RBP22.52■■□□□ 1.2
LITAF-212ENST00000573332 WDR63Q8IWG1 891 aa22.52■■□□□ 1.2
LITAF-212ENST00000573332 GIGYF1O75420 1035 aaPredicted RBP22.51■■□□□ 1.19
LITAF-212ENST00000573332 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
LITAF-212ENST00000573332 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
LITAF-212ENST00000573332 GNPATO15228 680 aa22.5■■□□□ 1.19
LITAF-212ENST00000573332 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
LITAF-212ENST00000573332 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
LITAF-212ENST00000573332 USP16Q9Y5T5 823 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms