RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 FCHSD2O94868 740 aa21.06■□□□□ 0.96
CHD3-215ENST00000572750 TXNRD1Q16881 649 aa21.06■□□□□ 0.96
CHD3-215ENST00000572750 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
CHD3-215ENST00000572750 MRC1P22897 1456 aa21.06■□□□□ 0.96
CHD3-215ENST00000572750 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
CHD3-215ENST00000572750 TMOD3Q9NYL9 352 aa21.05■□□□□ 0.96
CHD3-215ENST00000572750 GAS2L2Q8NHY3 880 aa21.04■□□□□ 0.96
CHD3-215ENST00000572750 STK32BQ9NY57 414 aa21.04■□□□□ 0.96
CHD3-215ENST00000572750 GPR162Q16538 588 aa21.03■□□□□ 0.96
CHD3-215ENST00000572750 PIGBQ92521 554 aa21.03■□□□□ 0.96
CHD3-215ENST00000572750 SIPA1L3O60292 1781 aaPredicted RBP21.02■□□□□ 0.96
CHD3-215ENST00000572750 C5P01031 1676 aa21.02■□□□□ 0.96
CHD3-215ENST00000572750 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
CHD3-215ENST00000572750 ERVV-2B6SEH9 535 aa21.01■□□□□ 0.95
CHD3-215ENST00000572750 WDR43Q15061 677 aaKnown RBP eCLIP21.01■□□□□ 0.95
CHD3-215ENST00000572750 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
CHD3-215ENST00000572750 TAF1LQ8IZX4 1826 aa21■□□□□ 0.95
CHD3-215ENST00000572750 PLEKHF1Q96S99 279 aa21■□□□□ 0.95
CHD3-215ENST00000572750 LGR6Q9HBX8 967 aa21■□□□□ 0.95
CHD3-215ENST00000572750 KCNQ4P56696 695 aa20.99■□□□□ 0.95
CHD3-215ENST00000572750 CABP4P57796 275 aa20.99■□□□□ 0.95
CHD3-215ENST00000572750 GNAT3A8MTJ3 354 aa20.98■□□□□ 0.95
CHD3-215ENST00000572750 RNMTO43148 476 aaKnown RBP20.98■□□□□ 0.95
CHD3-215ENST00000572750 LRRC4BQ9NT99 713 aa20.98■□□□□ 0.95
CHD3-215ENST00000572750 TUBGCP6Q96RT7 1819 aa20.98■□□□□ 0.95
CHD3-215ENST00000572750 MAPK8IP3Q9UPT6 1336 aa20.98■□□□□ 0.95
CHD3-215ENST00000572750 NEFMP07197 916 aa20.97■□□□□ 0.95
CHD3-215ENST00000572750 ASAP1Q9ULH1 1129 aa20.97■□□□□ 0.95
CHD3-215ENST00000572750 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
CHD3-215ENST00000572750 NFATC2IPQ8NCF5 419 aa20.96■□□□□ 0.95
CHD3-215ENST00000572750 CCNL1Q9UK58 526 aaPredicted RBP20.96■□□□□ 0.95
CHD3-215ENST00000572750 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
CHD3-215ENST00000572750 SMARCC1Q92922 1105 aaPredicted RBP20.95■□□□□ 0.94
CHD3-215ENST00000572750 SLC52A2Q9HAB3 445 aa20.95■□□□□ 0.94
CHD3-215ENST00000572750 MRS2Q9HD23 443 aa20.95■□□□□ 0.94
CHD3-215ENST00000572750 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
CHD3-215ENST00000572750 ADAMTS8Q9UP79 889 aa20.95■□□□□ 0.94
CHD3-215ENST00000572750 SLC27A3Q5K4L6 730 aa20.94■□□□□ 0.94
CHD3-215ENST00000572750 IL17REQ8NFR9 667 aa20.94■□□□□ 0.94
CHD3-215ENST00000572750 NLGN2Q8NFZ4 835 aa20.94■□□□□ 0.94
CHD3-215ENST00000572750 PNNQ9H307 717 aaKnown RBP20.94■□□□□ 0.94
CHD3-215ENST00000572750 CEMIPQ8WUJ3 1361 aa20.94■□□□□ 0.94
CHD3-215ENST00000572750 ZNF831Q5JPB2 1677 aa20.93■□□□□ 0.94
CHD3-215ENST00000572750 C4BP0C0L5 1744 aa20.93■□□□□ 0.94
CHD3-215ENST00000572750 COL5A3P25940 1745 aaPredicted RBP20.93■□□□□ 0.94
CHD3-215ENST00000572750 TJP1Q07157 1748 aa20.93■□□□□ 0.94
CHD3-215ENST00000572750 ZNF827Q17R98 1081 aa20.93■□□□□ 0.94
CHD3-215ENST00000572750 NFE2L2Q16236 605 aa20.92■□□□□ 0.94
CHD3-215ENST00000572750 MCM10Q7L590 875 aa20.92■□□□□ 0.94
CHD3-215ENST00000572750 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
CHD3-215ENST00000572750 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
CHD3-215ENST00000572750 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
CHD3-215ENST00000572750 COL24A1Q17RW2 1714 aa20.92■□□□□ 0.94
CHD3-215ENST00000572750 QSER1Q2KHR3 1735 aa20.92■□□□□ 0.94
CHD3-215ENST00000572750 YBX3P16989 372 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHD3-215ENST00000572750 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
CHD3-215ENST00000572750 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
CHD3-215ENST00000572750 LOC102724428A0A0B4J2F2 783 aa20.9■□□□□ 0.94
CHD3-215ENST00000572750 HSPA6P17066 643 aa20.9■□□□□ 0.94
CHD3-215ENST00000572750 SIK1P57059 783 aa20.9■□□□□ 0.94
CHD3-215ENST00000572750 TEFQ10587 303 aa20.9■□□□□ 0.94
CHD3-215ENST00000572750 ATP10DQ9P241 1426 aa20.89■□□□□ 0.94
CHD3-215ENST00000572750 RUNDC1Q96C34 613 aa20.89■□□□□ 0.93
CHD3-215ENST00000572750 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
CHD3-215ENST00000572750 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
CHD3-215ENST00000572750 KLHL34Q8N239 644 aa20.88■□□□□ 0.93
CHD3-215ENST00000572750 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
CHD3-215ENST00000572750 PTCD1O75127 700 aaKnown RBP20.87■□□□□ 0.93
CHD3-215ENST00000572750 SLC4A9Q96Q91 983 aa20.87■□□□□ 0.93
CHD3-215ENST00000572750 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
CHD3-215ENST00000572750 UBR3Q6ZT12 1888 aa20.86■□□□□ 0.93
CHD3-215ENST00000572750 HTATSF1O43719 755 aaKnown RBP20.86■□□□□ 0.93
CHD3-215ENST00000572750 ATP6V1AP38606 617 aa20.86■□□□□ 0.93
CHD3-215ENST00000572750 TMPOP42166 694 aaKnown RBP20.86■□□□□ 0.93
CHD3-215ENST00000572750 ITPK1Q13572 414 aa20.86■□□□□ 0.93
CHD3-215ENST00000572750 PNISRQ8TF01 805 aaKnown RBP20.86■□□□□ 0.93
CHD3-215ENST00000572750 THUMPD2Q9BTF0 503 aaKnown RBP20.86■□□□□ 0.93
CHD3-215ENST00000572750 LINC00116Q8NCU8 138 aa20.85■□□□□ 0.93
CHD3-215ENST00000572750 AKT1S1Q96B36 256 aa20.85■□□□□ 0.93
CHD3-215ENST00000572750 PCNTO95613 3336 aa20.84■□□□□ 0.93
CHD3-215ENST00000572750 RIPK4P57078 832 aa20.84■□□□□ 0.93
CHD3-215ENST00000572750 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
CHD3-215ENST00000572750 BTBD11A6QL63 1104 aa20.82■□□□□ 0.92
CHD3-215ENST00000572750 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
CHD3-215ENST00000572750 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
CHD3-215ENST00000572750 MYH14Q7Z406 1995 aaKnown RBP20.81■□□□□ 0.92
CHD3-215ENST00000572750 APAF1O14727 1248 aa20.8■□□□□ 0.92
CHD3-215ENST00000572750 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
CHD3-215ENST00000572750 AK7Q96M32 723 aa20.8■□□□□ 0.92
CHD3-215ENST00000572750 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
CHD3-215ENST00000572750 PNPLA7Q6ZV29 1317 aa20.79■□□□□ 0.92
CHD3-215ENST00000572750 KCNQ3O43525 872 aa20.79■□□□□ 0.92
CHD3-215ENST00000572750 LMOD3Q0VAK6 560 aa20.79■□□□□ 0.92
CHD3-215ENST00000572750 ADCY9O60503 1353 aa20.79■□□□□ 0.92
CHD3-215ENST00000572750 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
CHD3-215ENST00000572750 LAMB4A4D0S4 1761 aa20.78■□□□□ 0.92
CHD3-215ENST00000572750 AMIGO3Q86WK7 504 aa20.78■□□□□ 0.92
CHD3-215ENST00000572750 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
CHD3-215ENST00000572750 TRIM35Q9UPQ4 493 aa20.78■□□□□ 0.92
CHD3-215ENST00000572750 FAM9BQ8IZU0 186 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms