RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 DNAAF4Q8WXU2 420 aa24.28■■□□□ 1.48
EDC4-204ENST00000572221 ABCF2Q9UG63 623 aa24.28■■□□□ 1.48
EDC4-204ENST00000572221 CASTP20810 708 aaKnown RBP24.28■■□□□ 1.48
EDC4-204ENST00000572221 DEF6Q9H4E7 631 aa24.28■■□□□ 1.48
EDC4-204ENST00000572221 PTPRCP08575 1304 aa24.27■■□□□ 1.48
EDC4-204ENST00000572221 PATL2C9JE40 543 aaKnown RBP24.27■■□□□ 1.48
EDC4-204ENST00000572221 BICDL1Q6ZP65 573 aa24.27■■□□□ 1.48
EDC4-204ENST00000572221 NOM1Q5C9Z4 860 aaKnown RBP24.27■■□□□ 1.48
EDC4-204ENST00000572221 LRPPRCP42704 1394 aaKnown RBP24.27■■□□□ 1.48
EDC4-204ENST00000572221 MCM4P33991 863 aa24.27■■□□□ 1.48
EDC4-204ENST00000572221 PIP4K2BP78356 416 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 MYD88Q99836 296 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 EMILIN1Q9Y6C2 1016 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 CCDC196A0A1B0GTZ2 297 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 SPC24Q8NBT2 197 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 CCDC85AQ96PX6 553 aaPredicted RBP24.26■■□□□ 1.47
EDC4-204ENST00000572221 DENND4BO75064 1496 aaPredicted RBP24.26■■□□□ 1.47
EDC4-204ENST00000572221 SMTNL1A8MU46 457 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 ZPR1O75312 459 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 HMGB1P09429 215 aaKnown RBP24.26■■□□□ 1.47
EDC4-204ENST00000572221 IFIT5Q13325 482 aaKnown RBP24.26■■□□□ 1.47
EDC4-204ENST00000572221 VSIG10Q8N0Z9 540 aa24.26■■□□□ 1.47
EDC4-204ENST00000572221 ERLIN2O94905 339 aa24.25■■□□□ 1.47
EDC4-204ENST00000572221 TANGO6Q9C0B7 1094 aa24.25■■□□□ 1.47
EDC4-204ENST00000572221 SH2B1Q9NRF2 756 aaPredicted RBP24.25■■□□□ 1.47
EDC4-204ENST00000572221 KRI1Q8N9T8 703 aaKnown RBP24.25■■□□□ 1.47
EDC4-204ENST00000572221 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
EDC4-204ENST00000572221 GRPEL1Q9HAV7 217 aa24.24■■□□□ 1.47
EDC4-204ENST00000572221 FOXO3O43524 673 aa24.24■■□□□ 1.47
EDC4-204ENST00000572221 MAP3K12Q12852 859 aa24.23■■□□□ 1.47
EDC4-204ENST00000572221 UPF3BQ9BZI7 483 aaKnown RBP24.23■■□□□ 1.47
EDC4-204ENST00000572221 TEX13AQ9BXU3 409 aaPredicted RBP24.23■■□□□ 1.47
EDC4-204ENST00000572221 NAPBQ9H115 298 aa24.21■■□□□ 1.47
EDC4-204ENST00000572221 SSBP05455 408 aaKnown RBP eCLIP24.21■■□□□ 1.47
EDC4-204ENST00000572221 ZNF76P36508 570 aa24.21■■□□□ 1.47
EDC4-204ENST00000572221 PLEKHH1Q9ULM0 1364 aa24.21■■□□□ 1.47
EDC4-204ENST00000572221 BOLA2Q9H3K6 86 aa24.21■■□□□ 1.47
EDC4-204ENST00000572221 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
EDC4-204ENST00000572221 RPRD2Q5VT52 1461 aaKnown RBP24.21■■□□□ 1.47
EDC4-204ENST00000572221 FBXO31Q5XUX0 539 aaPredicted RBP24.21■■□□□ 1.47
EDC4-204ENST00000572221 CWC15Q9P013 229 aaKnown RBP24.21■■□□□ 1.47
EDC4-204ENST00000572221 PRPF40BQ6NWY9 871 aaKnown RBP24.2■■□□□ 1.47
EDC4-204ENST00000572221 SLC5A1P13866 664 aa24.2■■□□□ 1.46
EDC4-204ENST00000572221 MAP3K11Q16584 847 aa24.2■■□□□ 1.46
EDC4-204ENST00000572221 SCAND2PQ9GZW5 306 aaPredicted RBP24.2■■□□□ 1.46
EDC4-204ENST00000572221 NOS1P29475 1434 aa24.2■■□□□ 1.46
EDC4-204ENST00000572221 USP5P45974 858 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 MPRIPQ6WCQ1 1025 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 USHBP1Q8N6Y0 703 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 CCDC112Q8NEF3 446 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 IL16Q14005 1332 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 CCDC181Q5TID7 509 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 FLIIQ13045 1269 aa24.19■■□□□ 1.46
EDC4-204ENST00000572221 RNF41Q9H4P4 317 aaPredicted RBP24.18■■□□□ 1.46
EDC4-204ENST00000572221 TRMT112Q9UI30 125 aaKnown RBP24.18■■□□□ 1.46
EDC4-204ENST00000572221 FANCAO15360 1455 aa24.18■■□□□ 1.46
EDC4-204ENST00000572221 DDX11Q96FC9 970 aa24.18■■□□□ 1.46
EDC4-204ENST00000572221 SPINK5Q9NQ38 1064 aaPredicted RBP24.18■■□□□ 1.46
EDC4-204ENST00000572221 SEC63Q9UGP8 760 aaKnown RBP24.18■■□□□ 1.46
EDC4-204ENST00000572221 ANKRD18BA2A2Z9 1011 aa24.18■■□□□ 1.46
EDC4-204ENST00000572221 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
EDC4-204ENST00000572221 ANKRD36BQ8N2N9 1353 aa24.17■■□□□ 1.46
EDC4-204ENST00000572221 POLR3DP05423 398 aaPredicted RBP24.17■■□□□ 1.46
EDC4-204ENST00000572221 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
EDC4-204ENST00000572221 PHAXQ9H814 394 aaKnown RBP24.17■■□□□ 1.46
EDC4-204ENST00000572221 MKNK2Q9HBH9 465 aa24.17■■□□□ 1.46
EDC4-204ENST00000572221 LRRFIP2Q9Y608 721 aaKnown RBP24.17■■□□□ 1.46
EDC4-204ENST00000572221 CTCFLQ8NI51 663 aaPredicted RBP24.17■■□□□ 1.46
EDC4-204ENST00000572221 SMARCA5O60264 1052 aaPredicted RBP24.16■■□□□ 1.46
EDC4-204ENST00000572221 IQCA1Q86XH1 822 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 SLF2Q8IX21 1173 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 A0A087WZG4 1122 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 EXOC5O00471 708 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 CCDC83Q8IWF9 413 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 PAF1Q8N7H5 531 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 ERLIN1O75477 346 aa24.16■■□□□ 1.46
EDC4-204ENST00000572221 F6X3S4 739 aa24.15■■□□□ 1.46
EDC4-204ENST00000572221 MPHOSPH10O00566 681 aaKnown RBP24.15■■□□□ 1.46
EDC4-204ENST00000572221 DZIP1Q86YF9 867 aaKnown RBP24.15■■□□□ 1.46
EDC4-204ENST00000572221 IQCEQ6IPM2 695 aa24.15■■□□□ 1.46
EDC4-204ENST00000572221 IL27Q8NEV9 243 aa24.15■■□□□ 1.46
EDC4-204ENST00000572221 KRT28Q7Z3Y7 464 aa24.14■■□□□ 1.46
EDC4-204ENST00000572221 MINDY4BA8MYZ0 360 aa24.14■■□□□ 1.46
EDC4-204ENST00000572221 GOLGA6L10A6NI86 522 aa24.14■■□□□ 1.45
EDC4-204ENST00000572221 TRIM27P14373 513 aa24.14■■□□□ 1.45
EDC4-204ENST00000572221 CRACR2BQ8N4Y2 399 aaPredicted RBP24.14■■□□□ 1.45
EDC4-204ENST00000572221 EVI5LQ96CN4 794 aa24.13■■□□□ 1.45
EDC4-204ENST00000572221 ECHDC1Q9NTX5 307 aa24.13■■□□□ 1.45
EDC4-204ENST00000572221 TNIP1Q15025 636 aa24.13■■□□□ 1.45
EDC4-204ENST00000572221 AXDND1Q5T1B0 1012 aaPredicted RBP24.13■■□□□ 1.45
EDC4-204ENST00000572221 BCL11BQ9C0K0 894 aaPredicted RBP24.13■■□□□ 1.45
EDC4-204ENST00000572221 ZNF213O14771 459 aa24.13■■□□□ 1.45
EDC4-204ENST00000572221 PPP1R12BO60237 982 aaPredicted RBP24.12■■□□□ 1.45
EDC4-204ENST00000572221 CADPS2Q86UW7 1296 aa24.12■■□□□ 1.45
EDC4-204ENST00000572221 C8orf76Q96K31 380 aa24.12■■□□□ 1.45
EDC4-204ENST00000572221 ANKIB1Q9P2G1 1089 aa24.12■■□□□ 1.45
EDC4-204ENST00000572221 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
EDC4-204ENST00000572221 PIK3R4Q99570 1358 aa24.12■■□□□ 1.45
EDC4-204ENST00000572221 EIF5P55010 431 aaKnown RBP24.12■■□□□ 1.45
EDC4-204ENST00000572221 CCDC8Q9H0W5 538 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms