RNA–Protein interactions for RNA: ENST00000570242.1

ITGAM-208, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-208ENST00000570242 COL22A1Q8NFW1 1626 aaPredicted RBP13.28□□□□□ -0.28
ITGAM-208ENST00000570242 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
ITGAM-208ENST00000570242 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
ITGAM-208ENST00000570242 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
ITGAM-208ENST00000570242 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
ITGAM-208ENST00000570242 PRR14Q9BWN1 585 aa13.28□□□□□ -0.28
ITGAM-208ENST00000570242 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
ITGAM-208ENST00000570242 PDE4DQ08499 809 aa13.27□□□□□ -0.29
ITGAM-208ENST00000570242 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
ITGAM-208ENST00000570242 TMUB1Q9BVT8 246 aa13.27□□□□□ -0.29
ITGAM-208ENST00000570242 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
ITGAM-208ENST00000570242 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
ITGAM-208ENST00000570242 KIF1AQ12756 1690 aa13.26□□□□□ -0.29
ITGAM-208ENST00000570242 ESCO1Q5FWF5 840 aa13.26□□□□□ -0.29
ITGAM-208ENST00000570242 ZNF772Q68DY9 489 aaPredicted RBP13.25□□□□□ -0.29
ITGAM-208ENST00000570242 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
ITGAM-208ENST00000570242 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
ITGAM-208ENST00000570242 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
ITGAM-208ENST00000570242 AFF2P51816 1311 aa13.24□□□□□ -0.29
ITGAM-208ENST00000570242 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
ITGAM-208ENST00000570242 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
ITGAM-208ENST00000570242 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
ITGAM-208ENST00000570242 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
ITGAM-208ENST00000570242 FOXO3O43524 673 aa13.23□□□□□ -0.29
ITGAM-208ENST00000570242 CD46P15529 392 aa13.23□□□□□ -0.29
ITGAM-208ENST00000570242 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
ITGAM-208ENST00000570242 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
ITGAM-208ENST00000570242 ACTN4O43707 911 aaKnown RBP13.22□□□□□ -0.29
ITGAM-208ENST00000570242 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
ITGAM-208ENST00000570242 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
ITGAM-208ENST00000570242 C8orf37Q96NL8 207 aa13.22□□□□□ -0.29
ITGAM-208ENST00000570242 GCGRP47871 477 aa13.21□□□□□ -0.29
ITGAM-208ENST00000570242 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
ITGAM-208ENST00000570242 MARF1Q9Y4F3 1742 aaKnown RBP13.2□□□□□ -0.3
ITGAM-208ENST00000570242 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
ITGAM-208ENST00000570242 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
ITGAM-208ENST00000570242 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
ITGAM-208ENST00000570242 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
ITGAM-208ENST00000570242 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
ITGAM-208ENST00000570242 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
ITGAM-208ENST00000570242 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
ITGAM-208ENST00000570242 RXRBP28702 533 aa13.18□□□□□ -0.3
ITGAM-208ENST00000570242 MTRQ99707 1265 aa13.18□□□□□ -0.3
ITGAM-208ENST00000570242 POGKQ9P215 609 aa13.18□□□□□ -0.3
ITGAM-208ENST00000570242 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
ITGAM-208ENST00000570242 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
ITGAM-208ENST00000570242 RGS12O14924 1447 aa13.17□□□□□ -0.3
ITGAM-208ENST00000570242 COPS2P61201 443 aa13.17□□□□□ -0.3
ITGAM-208ENST00000570242 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
ITGAM-208ENST00000570242 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
ITGAM-208ENST00000570242 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
ITGAM-208ENST00000570242 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
ITGAM-208ENST00000570242 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
ITGAM-208ENST00000570242 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
ITGAM-208ENST00000570242 ITGBL1O95965 494 aaPredicted RBP13.15□□□□□ -0.3
ITGAM-208ENST00000570242 KCNC4Q03721 635 aa13.15□□□□□ -0.3
ITGAM-208ENST00000570242 FUT2Q10981 343 aa13.15□□□□□ -0.3
ITGAM-208ENST00000570242 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.3
ITGAM-208ENST00000570242 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
ITGAM-208ENST00000570242 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
ITGAM-208ENST00000570242 IL21Q9HBE4 155 aa13.15□□□□□ -0.3
ITGAM-208ENST00000570242 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
ITGAM-208ENST00000570242 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
ITGAM-208ENST00000570242 BCL9LQ86UU0 1499 aa13.14□□□□□ -0.31
ITGAM-208ENST00000570242 ATRNO75882 1429 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
ITGAM-208ENST00000570242 EP400Q96L91 3159 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 ATP7BP35670 1465 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 SBNO1A3KN83 1393 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 KDM4AO75164 1064 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 MS4A1P11836 297 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
ITGAM-208ENST00000570242 PUS10Q3MIT2 529 aaKnown RBP13.13□□□□□ -0.31
ITGAM-208ENST00000570242 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 USP21Q9UK80 565 aa13.13□□□□□ -0.31
ITGAM-208ENST00000570242 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
ITGAM-208ENST00000570242 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
ITGAM-208ENST00000570242 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
ITGAM-208ENST00000570242 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
ITGAM-208ENST00000570242 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
ITGAM-208ENST00000570242 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
ITGAM-208ENST00000570242 ITSN1Q15811 1721 aa13.12□□□□□ -0.31
ITGAM-208ENST00000570242 SLIT2O94813 1529 aa13.12□□□□□ -0.31
ITGAM-208ENST00000570242 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
ITGAM-208ENST00000570242 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
ITGAM-208ENST00000570242 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
ITGAM-208ENST00000570242 PLCH1Q4KWH8 1693 aa13.1□□□□□ -0.31
ITGAM-208ENST00000570242 PSME1Q06323 249 aa13.1□□□□□ -0.31
ITGAM-208ENST00000570242 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
ITGAM-208ENST00000570242 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
ITGAM-208ENST00000570242 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
ITGAM-208ENST00000570242 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
ITGAM-208ENST00000570242 NR1I2O75469 434 aa13.09□□□□□ -0.31
ITGAM-208ENST00000570242 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
ITGAM-208ENST00000570242 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
ITGAM-208ENST00000570242 TRPM1Q7Z4N2 1603 aa13.09□□□□□ -0.31
ITGAM-208ENST00000570242 GLI3P10071 1580 aa13.08□□□□□ -0.32
ITGAM-208ENST00000570242 ZPR1O75312 459 aa13.08□□□□□ -0.32
ITGAM-208ENST00000570242 USP46P62068 366 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms