RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
CNOT1-217ENST00000569263 MCM10Q7L590 875 aa17.19■□□□□ 0.34
CNOT1-217ENST00000569263 PIGBQ92521 554 aa17.19■□□□□ 0.34
CNOT1-217ENST00000569263 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
CNOT1-217ENST00000569263 APAF1O14727 1248 aa17.18■□□□□ 0.34
CNOT1-217ENST00000569263 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
CNOT1-217ENST00000569263 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
CNOT1-217ENST00000569263 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
CNOT1-217ENST00000569263 PLSCR1O15162 318 aa17.17■□□□□ 0.34
CNOT1-217ENST00000569263 DCTN1Q14203 1278 aa17.17■□□□□ 0.34
CNOT1-217ENST00000569263 SMARCC1Q92922 1105 aaPredicted RBP17.17■□□□□ 0.34
CNOT1-217ENST00000569263 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
CNOT1-217ENST00000569263 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
CNOT1-217ENST00000569263 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
CNOT1-217ENST00000569263 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
CNOT1-217ENST00000569263 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
CNOT1-217ENST00000569263 UBR2Q8IWV8 1755 aa17.14■□□□□ 0.33
CNOT1-217ENST00000569263 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
CNOT1-217ENST00000569263 C5P01031 1676 aa17.13■□□□□ 0.33
CNOT1-217ENST00000569263 KDM3BQ7LBC6 1761 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 TXNRD1Q16881 649 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
CNOT1-217ENST00000569263 CCNL1Q9UK58 526 aaPredicted RBP17.11■□□□□ 0.33
CNOT1-217ENST00000569263 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
CNOT1-217ENST00000569263 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
CNOT1-217ENST00000569263 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
CNOT1-217ENST00000569263 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
CNOT1-217ENST00000569263 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
CNOT1-217ENST00000569263 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
CNOT1-217ENST00000569263 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
CNOT1-217ENST00000569263 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
CNOT1-217ENST00000569263 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
CNOT1-217ENST00000569263 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
CNOT1-217ENST00000569263 TJP1Q07157 1748 aa17.08■□□□□ 0.32
CNOT1-217ENST00000569263 CICQ96RK0 1608 aaPredicted RBP17.08■□□□□ 0.32
CNOT1-217ENST00000569263 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
CNOT1-217ENST00000569263 SIK1P57059 783 aa17.08■□□□□ 0.32
CNOT1-217ENST00000569263 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
CNOT1-217ENST00000569263 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
CNOT1-217ENST00000569263 KCNQ4P56696 695 aa17.07■□□□□ 0.32
CNOT1-217ENST00000569263 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
CNOT1-217ENST00000569263 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
CNOT1-217ENST00000569263 PROM2Q8N271 834 aa17.07■□□□□ 0.32
CNOT1-217ENST00000569263 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
CNOT1-217ENST00000569263 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
CNOT1-217ENST00000569263 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
CNOT1-217ENST00000569263 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
CNOT1-217ENST00000569263 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
CNOT1-217ENST00000569263 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
CNOT1-217ENST00000569263 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
CNOT1-217ENST00000569263 C4BP0C0L5 1744 aa17.06■□□□□ 0.32
CNOT1-217ENST00000569263 NBPF14Q5TI25 921 aa17.05■□□□□ 0.32
CNOT1-217ENST00000569263 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
CNOT1-217ENST00000569263 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
CNOT1-217ENST00000569263 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
CNOT1-217ENST00000569263 KCNQ3O43525 872 aa17.03■□□□□ 0.32
CNOT1-217ENST00000569263 ZNF496Q96IT1 587 aaPredicted RBP17.03■□□□□ 0.32
CNOT1-217ENST00000569263 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
CNOT1-217ENST00000569263 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
CNOT1-217ENST00000569263 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
CNOT1-217ENST00000569263 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
CNOT1-217ENST00000569263 GNAI1P63096 354 aa17.02■□□□□ 0.32
CNOT1-217ENST00000569263 ITPK1Q13572 414 aa17.02■□□□□ 0.32
CNOT1-217ENST00000569263 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.32
CNOT1-217ENST00000569263 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
CNOT1-217ENST00000569263 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
CNOT1-217ENST00000569263 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
CNOT1-217ENST00000569263 ANO8Q9HCE9 1232 aaPredicted RBP17.01■□□□□ 0.31
CNOT1-217ENST00000569263 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
CNOT1-217ENST00000569263 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
CNOT1-217ENST00000569263 AK7Q96M32 723 aa17■□□□□ 0.31
CNOT1-217ENST00000569263 IL16Q14005 1332 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 UBR3Q6ZT12 1888 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 CHL1O00533 1208 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 ZNF827Q17R98 1081 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
CNOT1-217ENST00000569263 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
CNOT1-217ENST00000569263 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
CNOT1-217ENST00000569263 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
CNOT1-217ENST00000569263 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
CNOT1-217ENST00000569263 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
CNOT1-217ENST00000569263 MYH14Q7Z406 1995 aaKnown RBP16.98■□□□□ 0.31
CNOT1-217ENST00000569263 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
CNOT1-217ENST00000569263 STARD3NLO95772 234 aa16.97■□□□□ 0.31
CNOT1-217ENST00000569263 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
CNOT1-217ENST00000569263 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
CNOT1-217ENST00000569263 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
CNOT1-217ENST00000569263 TFCP2L1Q9NZI6 479 aa16.97■□□□□ 0.31
CNOT1-217ENST00000569263 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
CNOT1-217ENST00000569263 GNPATO15228 680 aa16.96■□□□□ 0.31
CNOT1-217ENST00000569263 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
CNOT1-217ENST00000569263 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
CNOT1-217ENST00000569263 CCDC87Q9NVE4 849 aa16.95■□□□□ 0.3
CNOT1-217ENST00000569263 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms