RNA–Protein interactions for RNA: ENST00000569192.5

BBS2-219, Transcript of Bardet-Biedl syndrome 2, human

TSL 3

Gene BBS2, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-219	ENST00000569192	GNRH1	P01148	92 aa		11.26	□□□□□ -0.61
BBS2-219	ENST00000569192	SCNN1D	P51172	638 aa		11.26	□□□□□ -0.61
BBS2-219	ENST00000569192	C6orf118	Q5T5N4	469 aa		11.26	□□□□□ -0.61
BBS2-219	ENST00000569192	TMEM229A	B2RXF0	380 aa		11.25	□□□□□ -0.61
BBS2-219	ENST00000569192	B4GALNT3	Q6L9W6	998 aa		11.25	□□□□□ -0.61
BBS2-219	ENST00000569192	KIFC2	Q96AC6	838 aa		11.25	□□□□□ -0.61
BBS2-219	ENST00000569192	ADH1A	P07327	375 aa		11.24	□□□□□ -0.61
BBS2-219	ENST00000569192	GDF10	P55107	478 aa		11.24	□□□□□ -0.61
BBS2-219	ENST00000569192	TRIM26	Q12899	539 aa	Predicted RBP	11.24	□□□□□ -0.61
BBS2-219	ENST00000569192		Q6ZVU0	165 aa		11.24	□□□□□ -0.61
BBS2-219	ENST00000569192	LINC00528	Q8N1L1	170 aa		11.24	□□□□□ -0.61
BBS2-219	ENST00000569192	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
BBS2-219	ENST00000569192	ZNF358	Q9NW07	568 aa		11.24	□□□□□ -0.61
BBS2-219	ENST00000569192	ZBTB7C	A1YPR0	619 aa		11.23	□□□□□ -0.61
BBS2-219	ENST00000569192	SOBP	A7XYQ1	873 aa		11.23	□□□□□ -0.61
BBS2-219	ENST00000569192	ESCO1	Q5FWF5	840 aa		11.23	□□□□□ -0.61
BBS2-219	ENST00000569192	AEBP1	Q8IUX7	1158 aa		11.23	□□□□□ -0.61
BBS2-219	ENST00000569192	ETNK1	Q9HBU6	452 aa		11.23	□□□□□ -0.61
BBS2-219	ENST00000569192	PATL2	C9JE40	543 aa	Known RBP	11.22	□□□□□ -0.61
BBS2-219	ENST00000569192	INHA	P05111	366 aa		11.22	□□□□□ -0.61
BBS2-219	ENST00000569192	KCNA1	Q09470	495 aa		11.22	□□□□□ -0.61
BBS2-219	ENST00000569192	SCARF1	Q14162	830 aa		11.22	□□□□□ -0.61
BBS2-219	ENST00000569192	SLAIN2	Q9P270	581 aa		11.22	□□□□□ -0.61
BBS2-219	ENST00000569192	BACH1	O14867	736 aa		11.21	□□□□□ -0.61
BBS2-219	ENST00000569192	AGBL1	Q96MI9	1066 aa		11.21	□□□□□ -0.61
BBS2-219	ENST00000569192	STAU1	O95793	577 aa	Known RBP	11.2	□□□□□ -0.62
BBS2-219	ENST00000569192	BMP2	P12643	396 aa		11.2	□□□□□ -0.62
BBS2-219	ENST00000569192	SSFA2	P28290	1259 aa		11.2	□□□□□ -0.62
BBS2-219	ENST00000569192	KDF1	Q8NAX2	398 aa	Predicted RBP	11.2	□□□□□ -0.62
BBS2-219	ENST00000569192	TSEN2	Q8NCE0	465 aa	Known RBP	11.2	□□□□□ -0.62
BBS2-219	ENST00000569192	ARHGEF10L	Q9HCE6	1279 aa		11.2	□□□□□ -0.62
BBS2-219	ENST00000569192	SLC4A9	Q96Q91	983 aa		11.19	□□□□□ -0.62
BBS2-219	ENST00000569192	HINFP	Q9BQA5	517 aa		11.19	□□□□□ -0.62
BBS2-219	ENST00000569192	ATP2B4	P23634	1241 aa		11.18	□□□□□ -0.62
BBS2-219	ENST00000569192	LCE2A	Q5TA79	106 aa	Predicted RBP	11.18	□□□□□ -0.62
BBS2-219	ENST00000569192	TSEN34	Q9BSV6	310 aa	Known RBP	11.18	□□□□□ -0.62
BBS2-219	ENST00000569192	RAB6B	Q9NRW1	208 aa		11.18	□□□□□ -0.62
BBS2-219	ENST00000569192	PTGIR	P43119	386 aa		11.17	□□□□□ -0.62
BBS2-219	ENST00000569192	OCLN	Q16625	522 aa		11.17	□□□□□ -0.62
BBS2-219	ENST00000569192	LCE2C	Q5TA81	110 aa		11.17	□□□□□ -0.62
BBS2-219	ENST00000569192	PHLDB3	Q6NSJ2	640 aa		11.17	□□□□□ -0.62
BBS2-219	ENST00000569192	XAGE2	Q96GT9	111 aa		11.17	□□□□□ -0.62
BBS2-219	ENST00000569192	SOS2	Q07890	1332 aa	Predicted RBP	11.16	□□□□□ -0.62
BBS2-219	ENST00000569192	PRMT3	O60678	531 aa		11.16	□□□□□ -0.62
BBS2-219	ENST00000569192	IL2RA	P01589	272 aa		11.16	□□□□□ -0.62
BBS2-219	ENST00000569192	RELB	Q01201	579 aa		11.16	□□□□□ -0.62
BBS2-219	ENST00000569192	CLN3	Q13286	438 aa		11.16	□□□□□ -0.62
BBS2-219	ENST00000569192	ESYT1	Q9BSJ8	1104 aa		11.16	□□□□□ -0.62
BBS2-219	ENST00000569192	SERTAD1	Q9UHV2	236 aa		11.16	□□□□□ -0.62
BBS2-219	ENST00000569192		A0A1W2PRU2	124 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	UPP2	O95045	317 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	WEE1	P30291	646 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	EPHA4	P54764	986 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	NFX1	Q12986	1120 aa	Known RBP	11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	C1orf216	Q8TAB5	229 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	CNKSR1	Q969H4	720 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	DNMT3L	Q9UJW3	386 aa		11.15	□□□□□ -0.62
BBS2-219	ENST00000569192	SPINT1	O43278	529 aa		11.14	□□□□□ -0.63
BBS2-219	ENST00000569192	SMTN	P53814	917 aa		11.14	□□□□□ -0.63
BBS2-219	ENST00000569192	TNS4	Q8IZW8	715 aa		11.14	□□□□□ -0.63
BBS2-219	ENST00000569192	PRIMPOL	Q96LW4	560 aa		11.14	□□□□□ -0.63
BBS2-219	ENST00000569192	HRH3	Q9Y5N1	445 aa		11.14	□□□□□ -0.63
BBS2-219	ENST00000569192	MTFR1	Q15390	333 aa		11.13	□□□□□ -0.63
BBS2-219	ENST00000569192	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.13	□□□□□ -0.63
BBS2-219	ENST00000569192		A6NJY4	79 aa		11.12	□□□□□ -0.63
BBS2-219	ENST00000569192	TERT	O14746	1132 aa	Known RBP	11.12	□□□□□ -0.63
BBS2-219	ENST00000569192	LGR5	O75473	907 aa		11.12	□□□□□ -0.63
BBS2-219	ENST00000569192	IGFBP4	P22692	258 aa		11.12	□□□□□ -0.63
BBS2-219	ENST00000569192	TREML4	Q6UXN2	200 aa		11.12	□□□□□ -0.63
BBS2-219	ENST00000569192	GNE	Q9Y223	722 aa	Known RBP	11.12	□□□□□ -0.63
BBS2-219	ENST00000569192	CTSO	P43234	321 aa	Predicted RBP	11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	VEGFB	P49765	207 aa		11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	FOXK2	Q01167	660 aa		11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	TLR1	Q15399	786 aa		11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	TAS1R3	Q7RTX0	852 aa		11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	GAS2L2	Q8NHY3	880 aa		11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	NLRP3	Q96P20	1036 aa		11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	INSM2	Q96T92	566 aa	Predicted RBP	11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.11	□□□□□ -0.63
BBS2-219	ENST00000569192	MEN1	O00255	615 aa		11.1	□□□□□ -0.63
BBS2-219	ENST00000569192	MAN1A2	O60476	641 aa		11.1	□□□□□ -0.63
BBS2-219	ENST00000569192	ARID4A	P29374	1257 aa	Predicted RBP	11.1	□□□□□ -0.63
BBS2-219	ENST00000569192	TXNDC2	Q86VQ3	553 aa		11.1	□□□□□ -0.63
BBS2-219	ENST00000569192	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.1	□□□□□ -0.63
BBS2-219	ENST00000569192	IVNS1ABP	Q9Y6Y0	642 aa		11.1	□□□□□ -0.63
BBS2-219	ENST00000569192	FIGNL2	A6NMB9	653 aa		11.09	□□□□□ -0.63
BBS2-219	ENST00000569192	TTLL8	A6PVC2	850 aa		11.09	□□□□□ -0.63
BBS2-219	ENST00000569192	CENPC	Q03188	943 aa		11.09	□□□□□ -0.63
BBS2-219	ENST00000569192	CCER1	Q8TC90	406 aa	Predicted RBP	11.09	□□□□□ -0.63
BBS2-219	ENST00000569192	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.09	□□□□□ -0.63
BBS2-219	ENST00000569192	NXF1	Q9UBU9	619 aa	Known RBP	11.09	□□□□□ -0.63
BBS2-219	ENST00000569192	ATAD2	Q6PL18	1390 aa		11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	CDK2AP1	O14519	115 aa		11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	FOXO3	O43524	673 aa		11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	WFS1	O76024	890 aa		11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	SLC9A9	Q8IVB4	645 aa		11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	NBPF15	Q8N660	670 aa		11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	SCG3	Q8WXD2	468 aa	Known RBP	11.08	□□□□□ -0.64
BBS2-219	ENST00000569192	PODXL2	Q9NZ53	605 aa		11.08	□□□□□ -0.64

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