RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
PKM-221ENST00000568743 MRC1P22897 1456 aa13.31□□□□□ -0.28
PKM-221ENST00000568743 SCN11AQ9UI33 1791 aa13.31□□□□□ -0.28
PKM-221ENST00000568743 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
PKM-221ENST00000568743 BTAF1O14981 1849 aa13.31□□□□□ -0.28
PKM-221ENST00000568743 ITGB4P16144 1822 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 CAMKK2Q96RR4 588 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 PALLDQ8WX93 1383 aa13.3□□□□□ -0.28
PKM-221ENST00000568743 PLSCR1O15162 318 aa13.29□□□□□ -0.28
PKM-221ENST00000568743 KCNQ4P56696 695 aa13.29□□□□□ -0.28
PKM-221ENST00000568743 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
PKM-221ENST00000568743 PROM2Q8N271 834 aa13.28□□□□□ -0.28
PKM-221ENST00000568743 MIS18AQ9NYP9 233 aa13.28□□□□□ -0.28
PKM-221ENST00000568743 BTBD11A6QL63 1104 aa13.27□□□□□ -0.29
PKM-221ENST00000568743 KCNQ3O43525 872 aa13.27□□□□□ -0.29
PKM-221ENST00000568743 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.29
PKM-221ENST00000568743 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
PKM-221ENST00000568743 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
PKM-221ENST00000568743 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.29
PKM-221ENST00000568743 TAF7Q15545 349 aaPredicted RBP13.26□□□□□ -0.29
PKM-221ENST00000568743 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
PKM-221ENST00000568743 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
PKM-221ENST00000568743 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
PKM-221ENST00000568743 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
PKM-221ENST00000568743 SIK1P57059 783 aa13.25□□□□□ -0.29
PKM-221ENST00000568743 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
PKM-221ENST00000568743 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
PKM-221ENST00000568743 SLC4A9Q96Q91 983 aa13.25□□□□□ -0.29
PKM-221ENST00000568743 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
PKM-221ENST00000568743 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
PKM-221ENST00000568743 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
PKM-221ENST00000568743 ITPK1Q13572 414 aa13.23□□□□□ -0.29
PKM-221ENST00000568743 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
PKM-221ENST00000568743 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
PKM-221ENST00000568743 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
PKM-221ENST00000568743 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
PKM-221ENST00000568743 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
PKM-221ENST00000568743 LY75O60449 1722 aa13.22□□□□□ -0.29
PKM-221ENST00000568743 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
PKM-221ENST00000568743 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
PKM-221ENST00000568743 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
PKM-221ENST00000568743 RREB1Q92766 1687 aa13.21□□□□□ -0.29
PKM-221ENST00000568743 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
PKM-221ENST00000568743 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
PKM-221ENST00000568743 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
PKM-221ENST00000568743 NUP188Q5SRE5 1749 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 CHL1O00533 1208 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
PKM-221ENST00000568743 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
PKM-221ENST00000568743 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
PKM-221ENST00000568743 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
PKM-221ENST00000568743 GNAI1P63096 354 aa13.19□□□□□ -0.3
PKM-221ENST00000568743 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKM-221ENST00000568743 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
PKM-221ENST00000568743 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
PKM-221ENST00000568743 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
PKM-221ENST00000568743 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
PKM-221ENST00000568743 ZNF521Q96K83 1311 aa13.18□□□□□ -0.3
PKM-221ENST00000568743 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
PKM-221ENST00000568743 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
PKM-221ENST00000568743 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
PKM-221ENST00000568743 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
PKM-221ENST00000568743 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
PKM-221ENST00000568743 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
PKM-221ENST00000568743 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
PKM-221ENST00000568743 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
PKM-221ENST00000568743 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
PKM-221ENST00000568743 TJP1Q07157 1748 aa13.16□□□□□ -0.3
PKM-221ENST00000568743 IL16Q14005 1332 aa13.16□□□□□ -0.3
PKM-221ENST00000568743 C5P01031 1676 aa13.16□□□□□ -0.3
PKM-221ENST00000568743 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
PKM-221ENST00000568743 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
PKM-221ENST00000568743 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
PKM-221ENST00000568743 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
PKM-221ENST00000568743 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
PKM-221ENST00000568743 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
PKM-221ENST00000568743 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
PKM-221ENST00000568743 FANCIQ9NVI1 1328 aa13.15□□□□□ -0.3
PKM-221ENST00000568743 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
PKM-221ENST00000568743 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
PKM-221ENST00000568743 SLC15A2Q16348 729 aa13.15□□□□□ -0.3
PKM-221ENST00000568743 AK7Q96M32 723 aa13.15□□□□□ -0.3
PKM-221ENST00000568743 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
PKM-221ENST00000568743 C4BP0C0L5 1744 aa13.14□□□□□ -0.31
PKM-221ENST00000568743 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
PKM-221ENST00000568743 GNPATO15228 680 aa13.14□□□□□ -0.31
PKM-221ENST00000568743 PHF14O94880 888 aa13.14□□□□□ -0.31
PKM-221ENST00000568743 A1BGP04217 495 aa13.14□□□□□ -0.31
PKM-221ENST00000568743 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
PKM-221ENST00000568743 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms