RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	CEMIP	Q8WUJ3	1361 aa		32.69	■■■□□ 2.82
RBBP6-211	ENST00000568316	BAG6	P46379	1132 aa		32.67	■■■□□ 2.82
RBBP6-211	ENST00000568316	LMOD3	Q0VAK6	560 aa		32.67	■■■□□ 2.82
RBBP6-211	ENST00000568316	TEF	Q10587	303 aa		32.67	■■■□□ 2.82
RBBP6-211	ENST00000568316	EN1	Q05925	392 aa	Predicted RBP	32.65	■■■□□ 2.82
RBBP6-211	ENST00000568316	TRIM35	Q9UPQ4	493 aa		32.65	■■■□□ 2.82
RBBP6-211	ENST00000568316	ASAP1	Q9ULH1	1129 aa		32.63	■■■□□ 2.81
RBBP6-211	ENST00000568316	SALL2	Q9Y467	1007 aa	Predicted RBP	32.61	■■■□□ 2.81
RBBP6-211	ENST00000568316	PALLD	Q8WX93	1383 aa		32.6	■■■□□ 2.81
RBBP6-211	ENST00000568316	ATG3	Q9NT62	314 aa		32.6	■■■□□ 2.81
RBBP6-211	ENST00000568316	SIPA1L3	O60292	1781 aa	Predicted RBP	32.6	■■■□□ 2.81
RBBP6-211	ENST00000568316	PLSCR1	O15162	318 aa		32.59	■■■□□ 2.81
RBBP6-211	ENST00000568316	EZH2	Q15910	746 aa	Known RBP	32.59	■■■□□ 2.81
RBBP6-211	ENST00000568316	SMARCC1	Q92922	1105 aa	Predicted RBP	32.58	■■■□□ 2.81
RBBP6-211	ENST00000568316	SLC39A6	Q13433	755 aa		32.57	■■■□□ 2.8
RBBP6-211	ENST00000568316	CAMKK2	Q96RR4	588 aa		32.57	■■■□□ 2.8
RBBP6-211	ENST00000568316	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.55	■■■□□ 2.8
RBBP6-211	ENST00000568316	RGPD4	Q7Z3J3	1758 aa		32.55	■■■□□ 2.8
RBBP6-211	ENST00000568316	BTBD11	A6QL63	1104 aa		32.54	■■■□□ 2.8
RBBP6-211	ENST00000568316	TAF7	Q15545	349 aa	Predicted RBP	32.54	■■■□□ 2.8
RBBP6-211	ENST00000568316	PAPPA	Q13219	1627 aa		32.54	■■■□□ 2.8
RBBP6-211	ENST00000568316	TXNRD1	Q16881	649 aa		32.53	■■■□□ 2.8
RBBP6-211	ENST00000568316	PROM2	Q8N271	834 aa		32.52	■■■□□ 2.8
RBBP6-211	ENST00000568316	MIS18A	Q9NYP9	233 aa		32.52	■■■□□ 2.8
RBBP6-211	ENST00000568316	LY75	O60449	1722 aa		32.51	■■■□□ 2.8
RBBP6-211	ENST00000568316	KCNQ4	P56696	695 aa		32.51	■■■□□ 2.79
RBBP6-211	ENST00000568316	CCDC27	Q2M243	656 aa		32.51	■■■□□ 2.79
RBBP6-211	ENST00000568316	PTCD1	O75127	700 aa	Known RBP	32.5	■■■□□ 2.79
RBBP6-211	ENST00000568316	WWC1	Q8IX03	1113 aa		32.5	■■■□□ 2.79
RBBP6-211	ENST00000568316	RBM42	Q9BTD8	480 aa	Known RBP	32.5	■■■□□ 2.79
RBBP6-211	ENST00000568316	KCNQ3	O43525	872 aa		32.49	■■■□□ 2.79
RBBP6-211	ENST00000568316	ZNF790	Q6PG37	636 aa		32.49	■■■□□ 2.79
RBBP6-211	ENST00000568316	TTC5	Q8N0Z6	440 aa		32.49	■■■□□ 2.79
RBBP6-211	ENST00000568316	CCNL1	Q9UK58	526 aa	Predicted RBP	32.49	■■■□□ 2.79
RBBP6-211	ENST00000568316	LOC102724428	A0A0B4J2F2	783 aa		32.48	■■■□□ 2.79
RBBP6-211	ENST00000568316	SIK1	P57059	783 aa		32.48	■■■□□ 2.79
RBBP6-211	ENST00000568316	NCBP3	Q53F19	620 aa	Known RBP	32.48	■■■□□ 2.79
RBBP6-211	ENST00000568316	LAS1L	Q9Y4W2	734 aa	Known RBP	32.48	■■■□□ 2.79
RBBP6-211	ENST00000568316	RREB1	Q92766	1687 aa		32.47	■■■□□ 2.79
RBBP6-211	ENST00000568316	KCP	Q6ZWJ8	1503 aa		32.46	■■■□□ 2.79
RBBP6-211	ENST00000568316	NGEF	Q8N5V2	710 aa		32.46	■■■□□ 2.79
RBBP6-211	ENST00000568316	LRRC4B	Q9NT99	713 aa		32.46	■■■□□ 2.79
RBBP6-211	ENST00000568316	CALD1	Q05682	793 aa	Known RBP	32.45	■■■□□ 2.79
RBBP6-211	ENST00000568316	SLC27A3	Q5K4L6	730 aa		32.45	■■■□□ 2.79
RBBP6-211	ENST00000568316	TSPYL4	Q9UJ04	414 aa		32.45	■■■□□ 2.79
RBBP6-211	ENST00000568316	UBR2	Q8IWV8	1755 aa		32.44	■■■□□ 2.78
RBBP6-211	ENST00000568316	KDM3B	Q7LBC6	1761 aa		32.43	■■■□□ 2.78
RBBP6-211	ENST00000568316	ZNF496	Q96IT1	587 aa	Predicted RBP	32.43	■■■□□ 2.78
RBBP6-211	ENST00000568316	SLC4A9	Q96Q91	983 aa		32.43	■■■□□ 2.78
RBBP6-211	ENST00000568316	NUP188	Q5SRE5	1749 aa		32.43	■■■□□ 2.78
RBBP6-211	ENST00000568316	ATP6V1A	P38606	617 aa		32.42	■■■□□ 2.78
RBBP6-211	ENST00000568316	ITPK1	Q13572	414 aa		32.4	■■■□□ 2.78
RBBP6-211	ENST00000568316	CHL1	O00533	1208 aa		32.39	■■■□□ 2.78
RBBP6-211	ENST00000568316	CFAP44	Q96MT7	982 aa		32.39	■■■□□ 2.78
RBBP6-211	ENST00000568316	FMNL2	Q96PY5	1086 aa		32.39	■■■□□ 2.78
RBBP6-211	ENST00000568316	IFT57	Q9NWB7	429 aa		32.39	■■■□□ 2.78
RBBP6-211	ENST00000568316	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.38	■■■□□ 2.77
RBBP6-211	ENST00000568316	BABAM1	Q9NWV8	329 aa		32.38	■■■□□ 2.77
RBBP6-211	ENST00000568316	HEG1	Q9ULI3	1381 aa		32.37	■■■□□ 2.77
RBBP6-211	ENST00000568316	ZNF853	P0CG23	659 aa		32.37	■■■□□ 2.77
RBBP6-211	ENST00000568316	GNAI1	P63096	354 aa		32.37	■■■□□ 2.77
RBBP6-211	ENST00000568316	WDR63	Q8IWG1	891 aa		32.37	■■■□□ 2.77
RBBP6-211	ENST00000568316	ZNF521	Q96K83	1311 aa		32.36	■■■□□ 2.77
RBBP6-211	ENST00000568316	MBIP	Q9NS73	344 aa		32.36	■■■□□ 2.77
RBBP6-211	ENST00000568316	C5	P01031	1676 aa		32.36	■■■□□ 2.77
RBBP6-211	ENST00000568316	TJP1	Q07157	1748 aa		32.35	■■■□□ 2.77
RBBP6-211	ENST00000568316	DNAJC10	Q8IXB1	793 aa		32.35	■■■□□ 2.77
RBBP6-211	ENST00000568316	LINC00116	Q8NCU8	138 aa		32.35	■■■□□ 2.77
RBBP6-211	ENST00000568316	ZNF831	Q5JPB2	1677 aa		32.34	■■■□□ 2.77
RBBP6-211	ENST00000568316	IL16	Q14005	1332 aa		32.34	■■■□□ 2.77
RBBP6-211	ENST00000568316	EIF4A1	P60842	406 aa	Known RBP	32.34	■■■□□ 2.77
RBBP6-211	ENST00000568316	TAF1L	Q8IZX4	1826 aa		32.33	■■■□□ 2.77
RBBP6-211	ENST00000568316	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.33	■■■□□ 2.77
RBBP6-211	ENST00000568316	VSIG10	Q8N0Z9	540 aa		32.32	■■■□□ 2.76
RBBP6-211	ENST00000568316	TSR2	Q969E8	191 aa	Known RBP	32.31	■■■□□ 2.76
RBBP6-211	ENST00000568316	CIC	Q96RK0	1608 aa	Predicted RBP	32.3	■■■□□ 2.76
RBBP6-211	ENST00000568316	PRAMEF22	A3QJZ6	481 aa		32.3	■■■□□ 2.76
RBBP6-211	ENST00000568316	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.3	■■■□□ 2.76
RBBP6-211	ENST00000568316	SNRPA1	P09661	255 aa	Known RBP	32.29	■■■□□ 2.76
RBBP6-211	ENST00000568316	ZNF827	Q17R98	1081 aa		32.29	■■■□□ 2.76
RBBP6-211	ENST00000568316	NBPF14	Q5TI25	921 aa		32.29	■■■□□ 2.76
RBBP6-211	ENST00000568316	C4B	P0C0L5	1744 aa		32.29	■■■□□ 2.76
RBBP6-211	ENST00000568316	COL5A3	P25940	1745 aa	Predicted RBP	32.29	■■■□□ 2.76
RBBP6-211	ENST00000568316	KRT24	Q2M2I5	525 aa		32.28	■■■□□ 2.76
RBBP6-211	ENST00000568316	STK32B	Q9NY57	414 aa		32.28	■■■□□ 2.76
RBBP6-211	ENST00000568316	SRCAP	Q6ZRS2	3230 aa		32.28	■■■□□ 2.76
RBBP6-211	ENST00000568316	GOLGA2	Q08379	1002 aa		32.26	■■■□□ 2.75
RBBP6-211	ENST00000568316	AKT1S1	Q96B36	256 aa		32.26	■■■□□ 2.75
RBBP6-211	ENST00000568316	GIGYF1	O75420	1035 aa	Predicted RBP	32.25	■■■□□ 2.75
RBBP6-211	ENST00000568316	CYP19A1	P11511	503 aa	Predicted RBP	32.25	■■■□□ 2.75
RBBP6-211	ENST00000568316	AK7	Q96M32	723 aa		32.25	■■■□□ 2.75
RBBP6-211	ENST00000568316	FANCI	Q9NVI1	1328 aa		32.25	■■■□□ 2.75
RBBP6-211	ENST00000568316	HMGB2	P26583	209 aa	Known RBP	32.24	■■■□□ 2.75
RBBP6-211	ENST00000568316	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.24	■■■□□ 2.75
RBBP6-211	ENST00000568316	USP16	Q9Y5T5	823 aa		32.24	■■■□□ 2.75
RBBP6-211	ENST00000568316	STARD3NL	O95772	234 aa		32.23	■■■□□ 2.75
RBBP6-211	ENST00000568316	CRKL	P46109	303 aa	Known RBP	32.23	■■■□□ 2.75
RBBP6-211	ENST00000568316	SLC15A2	Q16348	729 aa		32.23	■■■□□ 2.75
RBBP6-211	ENST00000568316	CNTNAP4	Q9C0A0	1308 aa		32.23	■■■□□ 2.75
RBBP6-211	ENST00000568316	MYH16	Q9H6N6	1097 aa		32.22	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms