RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 GIGYF1O75420 1035 aaPredicted RBP22.18■■□□□ 1.14
CLN6-208ENST00000567060 SYTL4Q96C24 671 aaPredicted RBP22.18■■□□□ 1.14
CLN6-208ENST00000567060 SHANK3Q9BYB0 1731 aa22.17■■□□□ 1.14
CLN6-208ENST00000567060 YBX3P16989 372 aaKnown RBP eCLIP22.17■■□□□ 1.141e-7■■□□□ 13.8
CLN6-208ENST00000567060 TUBGCP6Q96RT7 1819 aa22.17■■□□□ 1.14
CLN6-208ENST00000567060 HSP90AB1P08238 724 aaKnown RBP22.16■■□□□ 1.14
CLN6-208ENST00000567060 PRKAR2BP31323 418 aa22.16■■□□□ 1.14
CLN6-208ENST00000567060 IFNL2Q8IZJ0 200 aa22.16■■□□□ 1.14
CLN6-208ENST00000567060 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
CLN6-208ENST00000567060 COL23A1Q86Y22 540 aaPredicted RBP22.15■■□□□ 1.14
CLN6-208ENST00000567060 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
CLN6-208ENST00000567060 NKX1-1Q15270 411 aaPredicted RBP22.14■■□□□ 1.13
CLN6-208ENST00000567060 C1orf141Q5JVX7 400 aa22.13■■□□□ 1.13
CLN6-208ENST00000567060 CCNL1Q9UK58 526 aaPredicted RBP22.13■■□□□ 1.13
CLN6-208ENST00000567060 LY75O60449 1722 aa22.13■■□□□ 1.13
CLN6-208ENST00000567060 CYP27B1O15528 508 aa22.12■■□□□ 1.13
CLN6-208ENST00000567060 PLEKHF1Q96S99 279 aa22.12■■□□□ 1.13
CLN6-208ENST00000567060 MAPK8IP3Q9UPT6 1336 aa22.11■■□□□ 1.13
CLN6-208ENST00000567060 PHKG2P15735 406 aa22.11■■□□□ 1.13
CLN6-208ENST00000567060 CCDC184Q52MB2 194 aa22.11■■□□□ 1.13
CLN6-208ENST00000567060 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
CLN6-208ENST00000567060 ZNF530Q6P9A1 599 aaPredicted RBP22.11■■□□□ 1.13
CLN6-208ENST00000567060 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
CLN6-208ENST00000567060 GRIN3BO60391 1043 aa22.1■■□□□ 1.13
CLN6-208ENST00000567060 DOT1LQ8TEK3 1739 aa22.1■■□□□ 1.13
CLN6-208ENST00000567060 MTHFSDQ2M296 383 aaKnown RBP22.09■■□□□ 1.13
CLN6-208ENST00000567060 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
CLN6-208ENST00000567060 DCAF5Q96JK2 942 aa22.09■■□□□ 1.13
CLN6-208ENST00000567060 MSH5O43196 834 aa22.08■■□□□ 1.13
CLN6-208ENST00000567060 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.13
CLN6-208ENST00000567060 IFFO2Q5TF58 517 aa22.08■■□□□ 1.13
CLN6-208ENST00000567060 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
CLN6-208ENST00000567060 MIER1Q8N108 512 aa22.06■■□□□ 1.12
CLN6-208ENST00000567060 PHACTR3Q96KR7 559 aa22.06■■□□□ 1.12
CLN6-208ENST00000567060 GNAT3A8MTJ3 354 aa22.05■■□□□ 1.12
CLN6-208ENST00000567060 ERVV-2B6SEH9 535 aa22.04■■□□□ 1.12
CLN6-208ENST00000567060 NFE2L2Q16236 605 aa22.04■■□□□ 1.12
CLN6-208ENST00000567060 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
CLN6-208ENST00000567060 ADAMTS7Q9UKP4 1686 aa22.04■■□□□ 1.12
CLN6-208ENST00000567060 LMOD3Q0VAK6 560 aa22.03■■□□□ 1.12
CLN6-208ENST00000567060 CD2APQ9Y5K6 639 aa22.03■■□□□ 1.12
CLN6-208ENST00000567060 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.11
CLN6-208ENST00000567060 ATP10DQ9P241 1426 aa22.01■■□□□ 1.11
CLN6-208ENST00000567060 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
CLN6-208ENST00000567060 RTF1Q92541 710 aaKnown RBP22.01■■□□□ 1.11
CLN6-208ENST00000567060 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
CLN6-208ENST00000567060 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
CLN6-208ENST00000567060 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
CLN6-208ENST00000567060 CEMIPQ8WUJ3 1361 aa21.99■■□□□ 1.11
CLN6-208ENST00000567060 MRC1P22897 1456 aa21.98■■□□□ 1.11
CLN6-208ENST00000567060 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
CLN6-208ENST00000567060 RNMTO43148 476 aaKnown RBP21.98■■□□□ 1.11
CLN6-208ENST00000567060 FAM9BQ8IZU0 186 aa21.98■■□□□ 1.11
CLN6-208ENST00000567060 DLG5Q8TDM6 1919 aa21.98■■□□□ 1.11
CLN6-208ENST00000567060 VIRMAQ69YN4 1812 aaKnown RBP21.97■■□□□ 1.11
CLN6-208ENST00000567060 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
CLN6-208ENST00000567060 SMIM5Q71RC9 77 aa21.97■■□□□ 1.11
CLN6-208ENST00000567060 CCDC146Q8IYE0 955 aa21.97■■□□□ 1.11
CLN6-208ENST00000567060 FLAD1Q8NFF5 587 aa21.97■■□□□ 1.11
CLN6-208ENST00000567060 ITGB4P16144 1822 aa21.96■■□□□ 1.11
CLN6-208ENST00000567060 HMGB2P26583 209 aaKnown RBP21.96■■□□□ 1.11
CLN6-208ENST00000567060 RIPK4P57078 832 aa21.96■■□□□ 1.11
CLN6-208ENST00000567060 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
CLN6-208ENST00000567060 ADCY9O60503 1353 aa21.96■■□□□ 1.11
CLN6-208ENST00000567060 PALLDQ8WX93 1383 aa21.96■■□□□ 1.11
CLN6-208ENST00000567060 C5P01031 1676 aa21.95■■□□□ 1.1
CLN6-208ENST00000567060 CABP4P57796 275 aa21.95■■□□□ 1.1
CLN6-208ENST00000567060 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
CLN6-208ENST00000567060 GPBP1L1Q9HC44 474 aaPredicted RBP21.95■■□□□ 1.1
CLN6-208ENST00000567060 APAF1O14727 1248 aa21.93■■□□□ 1.1
CLN6-208ENST00000567060 TEFQ10587 303 aa21.93■■□□□ 1.1
CLN6-208ENST00000567060 CCDC27Q2M243 656 aa21.93■■□□□ 1.1
CLN6-208ENST00000567060 TAF1LQ8IZX4 1826 aa21.93■■□□□ 1.1
CLN6-208ENST00000567060 IL17REQ8NFR9 667 aa21.93■■□□□ 1.1
CLN6-208ENST00000567060 SMARCC1Q92922 1105 aaPredicted RBP21.93■■□□□ 1.1
CLN6-208ENST00000567060 ZNF526Q8TF50 670 aaPredicted RBP21.92■■□□□ 1.1
CLN6-208ENST00000567060 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
CLN6-208ENST00000567060 HSPA6P17066 643 aa21.91■■□□□ 1.1
CLN6-208ENST00000567060 CALD1Q05682 793 aaKnown RBP21.91■■□□□ 1.1
CLN6-208ENST00000567060 PIGBQ92521 554 aa21.91■■□□□ 1.1
CLN6-208ENST00000567060 BABAM1Q9NWV8 329 aa21.9■■□□□ 1.1
CLN6-208ENST00000567060 WWC3Q9ULE0 1092 aa21.9■■□□□ 1.1
CLN6-208ENST00000567060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.89■■□□□ 1.09
CLN6-208ENST00000567060 NFATC2IPQ8NCF5 419 aa21.89■■□□□ 1.09
CLN6-208ENST00000567060 AK7Q96M32 723 aa21.89■■□□□ 1.09
CLN6-208ENST00000567060 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.09
CLN6-208ENST00000567060 C4BP0C0L5 1744 aa21.89■■□□□ 1.09
CLN6-208ENST00000567060 PHF14O94880 888 aa21.88■■□□□ 1.09
CLN6-208ENST00000567060 MCM10Q7L590 875 aa21.87■■□□□ 1.09
CLN6-208ENST00000567060 TRIM35Q9UPQ4 493 aa21.87■■□□□ 1.09
CLN6-208ENST00000567060 TAF7Q15545 349 aaPredicted RBP21.86■■□□□ 1.09
CLN6-208ENST00000567060 NEUROD2Q15784 382 aa21.86■■□□□ 1.09
CLN6-208ENST00000567060 LINC00116Q8NCU8 138 aa21.86■■□□□ 1.09
CLN6-208ENST00000567060 RRP7AQ9Y3A4 280 aaKnown RBP21.86■■□□□ 1.09
CLN6-208ENST00000567060 KIF3CO14782 793 aa21.85■■□□□ 1.09
CLN6-208ENST00000567060 UBR3Q6ZT12 1888 aa21.85■■□□□ 1.09
CLN6-208ENST00000567060 LOC102724428A0A0B4J2F2 783 aa21.84■■□□□ 1.09
CLN6-208ENST00000567060 SSFA2P28290 1259 aa21.84■■□□□ 1.09
CLN6-208ENST00000567060 SIK1P57059 783 aa21.84■■□□□ 1.09
CLN6-208ENST00000567060 ZNF831Q5JPB2 1677 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms