RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
CDH1-209ENST00000566510 LTKP29376 864 aa17.4■□□□□ 0.38
CDH1-209ENST00000566510 FLIIQ13045 1269 aa17.4■□□□□ 0.38
CDH1-209ENST00000566510 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.4■□□□□ 0.38
CDH1-209ENST00000566510 MX1P20591 662 aa17.4■□□□□ 0.38
CDH1-209ENST00000566510 OSBPL3Q9H4L5 887 aa17.4■□□□□ 0.38
CDH1-209ENST00000566510 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.37
CDH1-209ENST00000566510 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
CDH1-209ENST00000566510 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
CDH1-209ENST00000566510 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
CDH1-209ENST00000566510 GNAI3P08754 354 aa17.38■□□□□ 0.37
CDH1-209ENST00000566510 MCCP23508 829 aa17.38■□□□□ 0.37
CDH1-209ENST00000566510 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
CDH1-209ENST00000566510 IBTKQ9P2D0 1353 aaPredicted RBP17.38■□□□□ 0.37
CDH1-209ENST00000566510 ZNF445P59923 1031 aa17.38■□□□□ 0.37
CDH1-209ENST00000566510 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
CDH1-209ENST00000566510 FLT4P35916 1363 aa17.37■□□□□ 0.37
CDH1-209ENST00000566510 GPT2Q8TD30 523 aa17.37■□□□□ 0.37
CDH1-209ENST00000566510 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
CDH1-209ENST00000566510 PRIM1P49642 420 aaKnown RBP17.37■□□□□ 0.37
CDH1-209ENST00000566510 FOXD4L6Q3SYB3 417 aaPredicted RBP17.37■□□□□ 0.37
CDH1-209ENST00000566510 FOXD4L3Q6VB84 417 aaPredicted RBP17.37■□□□□ 0.37
CDH1-209ENST00000566510 PPP1R9BQ96SB3 815 aa17.37■□□□□ 0.37
CDH1-209ENST00000566510 ADAMTS13Q76LX8 1427 aa17.37■□□□□ 0.37
CDH1-209ENST00000566510 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
CDH1-209ENST00000566510 MSNP26038 577 aaKnown RBP17.36■□□□□ 0.37
CDH1-209ENST00000566510 NLRP6P59044 892 aa17.36■□□□□ 0.37
CDH1-209ENST00000566510 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
CDH1-209ENST00000566510 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
CDH1-209ENST00000566510 RBSNQ9H1K0 784 aa17.36■□□□□ 0.37
CDH1-209ENST00000566510 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
CDH1-209ENST00000566510 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
CDH1-209ENST00000566510 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
CDH1-209ENST00000566510 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
CDH1-209ENST00000566510 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
CDH1-209ENST00000566510 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
CDH1-209ENST00000566510 CHMLP26374 656 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
CDH1-209ENST00000566510 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 SYCE3A1L190 88 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 MAP4K4O95819 1239 aaPredicted RBP17.34■□□□□ 0.37
CDH1-209ENST00000566510 ZSCAN30Q86W11 494 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
CDH1-209ENST00000566510 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
CDH1-209ENST00000566510 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.37
CDH1-209ENST00000566510 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.36
CDH1-209ENST00000566510 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
CDH1-209ENST00000566510 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.36
CDH1-209ENST00000566510 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
CDH1-209ENST00000566510 UBR1Q8IWV7 1749 aa17.32■□□□□ 0.36
CDH1-209ENST00000566510 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
CDH1-209ENST00000566510 MCM2P49736 904 aa17.32■□□□□ 0.36
CDH1-209ENST00000566510 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
CDH1-209ENST00000566510 SALL3Q9BXA9 1300 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 KDRP35968 1356 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
CDH1-209ENST00000566510 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 USHBP1Q8N6Y0 703 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
CDH1-209ENST00000566510 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
CDH1-209ENST00000566510 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
CDH1-209ENST00000566510 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
CDH1-209ENST00000566510 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
CDH1-209ENST00000566510 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
CDH1-209ENST00000566510 RNF214Q8ND24 703 aa17.3■□□□□ 0.36
CDH1-209ENST00000566510 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
CDH1-209ENST00000566510 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
CDH1-209ENST00000566510 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
CDH1-209ENST00000566510 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
CDH1-209ENST00000566510 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
CDH1-209ENST00000566510 HSP90AA2PQ14568 343 aaPredicted RBP17.29■□□□□ 0.36
CDH1-209ENST00000566510 HTATSF1O43719 755 aaKnown RBP17.29■□□□□ 0.36
CDH1-209ENST00000566510 HOXC9P31274 260 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 LRSAM1Q6UWE0 723 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 BRD1O95696 1058 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 ANAPC15P60006 121 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
CDH1-209ENST00000566510 SETD1BQ9UPS6 1966 aaKnown RBP17.27■□□□□ 0.36
CDH1-209ENST00000566510 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
CDH1-209ENST00000566510 IL25Q9H293 177 aa17.27■□□□□ 0.36
CDH1-209ENST00000566510 MBD3O95983 291 aa17.27■□□□□ 0.35
CDH1-209ENST00000566510 STAP2Q9UGK3 403 aa17.27■□□□□ 0.35
CDH1-209ENST00000566510 CUL4AQ13619 759 aa17.26■□□□□ 0.35
CDH1-209ENST00000566510 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
CDH1-209ENST00000566510 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
CDH1-209ENST00000566510 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
CDH1-209ENST00000566510 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
CDH1-209ENST00000566510 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
CDH1-209ENST00000566510 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
CDH1-209ENST00000566510 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
CDH1-209ENST00000566510 FAM208AQ9UK61 1670 aaKnown RBP17.24■□□□□ 0.35
CDH1-209ENST00000566510 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
CDH1-209ENST00000566510 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms