RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 FANCAO15360 1455 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
USB1-212ENST00000566082 PTPRCP08575 1304 aa12.53□□□□□ -0.4
USB1-212ENST00000566082 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
USB1-212ENST00000566082 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.4
USB1-212ENST00000566082 CHD1O14646 1710 aa12.52□□□□□ -0.4
USB1-212ENST00000566082 UBE2HP62256 183 aa12.52□□□□□ -0.41
USB1-212ENST00000566082 TSC1Q92574 1164 aa12.52□□□□□ -0.41
USB1-212ENST00000566082 PRIMPOLQ96LW4 560 aa12.52□□□□□ -0.41
USB1-212ENST00000566082 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
USB1-212ENST00000566082 FLIIQ13045 1269 aa12.52□□□□□ -0.41
USB1-212ENST00000566082 DDX11Q96FC9 970 aa12.52□□□□□ -0.41
USB1-212ENST00000566082 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 IGSF3O75054 1194 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 SMC2O95347 1197 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 AACSQ86V21 672 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 MNS1Q8NEH6 495 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 CPLX1O14810 134 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 GJB2P29033 226 aa12.51□□□□□ -0.41
USB1-212ENST00000566082 ZSCAN31Q96LW9 406 aaPredicted RBP12.5□□□□□ -0.41
USB1-212ENST00000566082 DNAJC2Q99543 621 aaKnown RBP12.5□□□□□ -0.41
USB1-212ENST00000566082 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
USB1-212ENST00000566082 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
USB1-212ENST00000566082 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
USB1-212ENST00000566082 UVSSAQ2YD98 709 aa12.5□□□□□ -0.41
USB1-212ENST00000566082 TNNT1P13805 278 aa12.5□□□□□ -0.41
USB1-212ENST00000566082 RIC3Q7Z5B4 369 aa12.5□□□□□ -0.41
USB1-212ENST00000566082 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
USB1-212ENST00000566082 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 ME1P48163 572 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 GLRX3O76003 335 aaKnown RBP12.49□□□□□ -0.41
USB1-212ENST00000566082 DNM1Q05193 864 aaKnown RBP12.49□□□□□ -0.41
USB1-212ENST00000566082 HSP90AB2PQ58FF8 381 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
USB1-212ENST00000566082 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
USB1-212ENST00000566082 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
USB1-212ENST00000566082 KDM4AO75164 1064 aa12.48□□□□□ -0.41
USB1-212ENST00000566082 GADD45BO75293 160 aaPredicted RBP12.48□□□□□ -0.41
USB1-212ENST00000566082 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
USB1-212ENST00000566082 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
USB1-212ENST00000566082 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
USB1-212ENST00000566082 TRMT1Q9NXH9 659 aaKnown RBP12.48□□□□□ -0.41
USB1-212ENST00000566082 SYNMO15061 1565 aa12.48□□□□□ -0.41
USB1-212ENST00000566082 SYNE3Q6ZMZ3 975 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 CPA1P15085 419 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 TEX35Q5T0J7 233 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 CCDC186Q7Z3E2 898 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 ARGLU1Q9NWB6 273 aaPredicted RBP12.47□□□□□ -0.41
USB1-212ENST00000566082 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 CHMLP26374 656 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 ANAPC15P60006 121 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
USB1-212ENST00000566082 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
USB1-212ENST00000566082 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
USB1-212ENST00000566082 KDM5AP29375 1690 aaKnown RBP12.47□□□□□ -0.41
USB1-212ENST00000566082 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.41
USB1-212ENST00000566082 HIP1O00291 1037 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 FAM177A1Q8N128 213 aaPredicted RBP12.46□□□□□ -0.41
USB1-212ENST00000566082 MSH6P52701 1360 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 CCDC66A2RUB6 948 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 ZNF165P49910 485 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 G2E3Q7L622 706 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.41
USB1-212ENST00000566082 BOLA2Q9H3K6 86 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.41
USB1-212ENST00000566082 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.42
USB1-212ENST00000566082 PTPN14Q15678 1187 aa12.46□□□□□ -0.42
USB1-212ENST00000566082 ERC1Q8IUD2 1116 aa12.46□□□□□ -0.42
USB1-212ENST00000566082 SLC26A8Q96RN1 970 aa12.46□□□□□ -0.42
USB1-212ENST00000566082 SCAND2PQ9GZW5 306 aaPredicted RBP12.46□□□□□ -0.42
USB1-212ENST00000566082 CGNQ9P2M7 1197 aaKnown RBP12.46□□□□□ -0.42
USB1-212ENST00000566082 ZNF500O60304 480 aaPredicted RBP12.45□□□□□ -0.42
USB1-212ENST00000566082 AK2P54819 239 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
USB1-212ENST00000566082 ATP10AO60312 1499 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 F13A1P00488 732 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 ANXA1P04083 346 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 SIRT2Q8IXJ6 389 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 PDILTQ8N807 584 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
USB1-212ENST00000566082 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
USB1-212ENST00000566082 NCKAP5LQ9HCH0 1330 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 FOXO3O43524 673 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 SYT1P21579 422 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 TERF1P54274 439 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 STK38Q15208 465 aa12.45□□□□□ -0.42
USB1-212ENST00000566082 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms