RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 RALGAPBQ86X10 1494 aa22.68■■□□□ 1.22
IFT140-206ENST00000565298 F6X3S4 739 aa22.68■■□□□ 1.22
IFT140-206ENST00000565298 MBD3O95983 291 aa22.68■■□□□ 1.22
IFT140-206ENST00000565298 IMMTQ16891 758 aaKnown RBP22.68■■□□□ 1.22
IFT140-206ENST00000565298 NUP133Q8WUM0 1156 aa22.68■■□□□ 1.22
IFT140-206ENST00000565298 MX1P20591 662 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 GPTP24298 496 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 RFC4P35249 363 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 MAP3K12Q12852 859 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 CWC25Q9NXE8 425 aaPredicted RBP22.67■■□□□ 1.22
IFT140-206ENST00000565298 PRAG1Q86YV5 1406 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 KDM4AO75164 1064 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 UHRF1BP1Q6BDS2 1440 aa22.67■■□□□ 1.22
IFT140-206ENST00000565298 PIK3R4Q99570 1358 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 SLF2Q8IX21 1173 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 CCDC70Q6NSX1 233 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 NUTM1Q86Y26 1132 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 STK11IPQ8N1F8 1099 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 CNKSR2Q8WXI2 1034 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 GSE1Q14687 1217 aa22.66■■□□□ 1.22
IFT140-206ENST00000565298 ZSCAN31Q96LW9 406 aaPredicted RBP22.65■■□□□ 1.22
IFT140-206ENST00000565298 DZIP1Q86YF9 867 aaKnown RBP22.65■■□□□ 1.22
IFT140-206ENST00000565298 GOLGA6L1Q8N7Z2 621 aa22.65■■□□□ 1.22
IFT140-206ENST00000565298 U3KPZ7 1027 aaPredicted RBP22.65■■□□□ 1.22
IFT140-206ENST00000565298 FLT4P35916 1363 aa22.65■■□□□ 1.22
IFT140-206ENST00000565298 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
IFT140-206ENST00000565298 DDX46Q7L014 1031 aaKnown RBP22.65■■□□□ 1.22
IFT140-206ENST00000565298 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
IFT140-206ENST00000565298 TRPM2O94759 1503 aa22.64■■□□□ 1.22
IFT140-206ENST00000565298 AKAP4Q5JQC9 854 aa22.64■■□□□ 1.21
IFT140-206ENST00000565298 PDIA4P13667 645 aaKnown RBP22.64■■□□□ 1.21
IFT140-206ENST00000565298 IL2RBP14784 551 aa22.64■■□□□ 1.21
IFT140-206ENST00000565298 LRRFIP2Q9Y608 721 aaKnown RBP22.64■■□□□ 1.21
IFT140-206ENST00000565298 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 EPS15P42566 896 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 USP5P45974 858 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 NOL7Q9UMY1 257 aaKnown RBP22.63■■□□□ 1.21
IFT140-206ENST00000565298 GCP02774 474 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 MAP3K2Q9Y2U5 619 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 OFD1O75665 1012 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 LDHAL6AQ6ZMR3 332 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 ANKRD13DQ6ZTN6 518 aa22.63■■□□□ 1.21
IFT140-206ENST00000565298 C6orf229H3BNL8 230 aa22.62■■□□□ 1.21
IFT140-206ENST00000565298 WDHD1O75717 1129 aaPredicted RBP22.62■■□□□ 1.21
IFT140-206ENST00000565298 KRT18P05783 430 aaKnown RBP22.62■■□□□ 1.21
IFT140-206ENST00000565298 PI4KAP2A4QPH2 592 aa22.62■■□□□ 1.21
IFT140-206ENST00000565298 PI4KAP1Q8N8J0 262 aa22.62■■□□□ 1.21
IFT140-206ENST00000565298 JAKMIP1Q96N16 626 aaKnown RBP22.62■■□□□ 1.21
IFT140-206ENST00000565298 MBIPQ9NS73 344 aa22.62■■□□□ 1.21
IFT140-206ENST00000565298 CRACR2BQ8N4Y2 399 aaPredicted RBP22.62■■□□□ 1.21
IFT140-206ENST00000565298 NPATQ14207 1427 aa22.61■■□□□ 1.21
IFT140-206ENST00000565298 WWC2Q6AWC2 1192 aa22.61■■□□□ 1.21
IFT140-206ENST00000565298 POLR3DP05423 398 aaPredicted RBP22.61■■□□□ 1.21
IFT140-206ENST00000565298 BOLA2Q9H3K6 86 aa22.61■■□□□ 1.21
IFT140-206ENST00000565298 STK3Q13188 491 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 UBE3BQ7Z3V4 1068 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 WASF1Q92558 559 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 NAPBQ9H115 298 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 PDRG1Q9NUG6 133 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 WDR33Q9C0J8 1336 aaKnown RBP22.6■■□□□ 1.21
IFT140-206ENST00000565298 FAM83GA6ND36 823 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 LDHCP07864 332 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 PIP4K2AP48426 406 aaPredicted RBP22.6■■□□□ 1.21
IFT140-206ENST00000565298 TMEM132AQ24JP5 1023 aa22.6■■□□□ 1.21
IFT140-206ENST00000565298 LETM1O95202 739 aaPredicted RBP22.59■■□□□ 1.21
IFT140-206ENST00000565298 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
IFT140-206ENST00000565298 CABLES1Q8TDN4 633 aa22.59■■□□□ 1.21
IFT140-206ENST00000565298 MKNK2Q9HBH9 465 aa22.59■■□□□ 1.21
IFT140-206ENST00000565298 FBLN1P23142 703 aa22.59■■□□□ 1.21
IFT140-206ENST00000565298 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
IFT140-206ENST00000565298 NBPF5PQ86XG9 351 aaPredicted RBP22.59■■□□□ 1.21
IFT140-206ENST00000565298 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
IFT140-206ENST00000565298 EIF4A2Q14240 407 aaKnown RBP22.58■■□□□ 1.21
IFT140-206ENST00000565298 LARP1BQ659C4 914 aaKnown RBP22.58■■□□□ 1.21
IFT140-206ENST00000565298 ATP5J2-PTCD1G3V325 749 aa22.58■■□□□ 1.21
IFT140-206ENST00000565298 TRIM27P14373 513 aa22.58■■□□□ 1.21
IFT140-206ENST00000565298 POLKQ9UBT6 870 aa22.58■■□□□ 1.21
IFT140-206ENST00000565298 NEO1Q92859 1461 aa22.58■■□□□ 1.21
IFT140-206ENST00000565298 CCAR2Q8N163 923 aaKnown RBP22.58■■□□□ 1.2
IFT140-206ENST00000565298 FIBPO43427 364 aa22.57■■□□□ 1.2
IFT140-206ENST00000565298 ST5P78524 1137 aa22.57■■□□□ 1.2
IFT140-206ENST00000565298 CT47A1Q5JQC4 288 aaPredicted RBP22.57■■□□□ 1.2
IFT140-206ENST00000565298 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
IFT140-206ENST00000565298 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
IFT140-206ENST00000565298 KRT85P78386 507 aa22.56■■□□□ 1.2
IFT140-206ENST00000565298 K7ELQ4 463 aaPredicted RBP22.56■■□□□ 1.2
IFT140-206ENST00000565298 ATP6V1AP38606 617 aa22.56■■□□□ 1.2
IFT140-206ENST00000565298 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
IFT140-206ENST00000565298 MINDY4BA8MYZ0 360 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 HOMER1Q86YM7 354 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 ARHGAP45Q92619 1136 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 RNF41Q9H4P4 317 aaPredicted RBP22.55■■□□□ 1.2
IFT140-206ENST00000565298 CCDC152Q4G0S7 254 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 CCDC196A0A1B0GTZ2 297 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 CDCA7Q9BWT1 371 aaPredicted RBP22.55■■□□□ 1.2
IFT140-206ENST00000565298 BACH2Q9BYV9 841 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 ECHDC1Q9NTX5 307 aa22.55■■□□□ 1.2
IFT140-206ENST00000565298 TTF1Q15361 905 aaPredicted RBP22.54■■□□□ 1.2
IFT140-206ENST00000565298 ATP7AQ04656 1500 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms