RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FLT4P35916 1363 aa9.19□□□□□ -0.94
HERPUD1-209ENST00000564678 UNCXA6NJT0 531 aa9.19□□□□□ -0.94
HERPUD1-209ENST00000564678 SULT6B1Q6IMI4 303 aa9.19□□□□□ -0.94
HERPUD1-209ENST00000564678 SKAP1Q86WV1 359 aa9.19□□□□□ -0.94
HERPUD1-209ENST00000564678 ZNF142P52746 1687 aaPredicted RBP9.18□□□□□ -0.94
HERPUD1-209ENST00000564678 ARHGEF10O15013 1369 aa9.18□□□□□ -0.94
HERPUD1-209ENST00000564678 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
HERPUD1-209ENST00000564678 LAS1LQ9Y4W2 734 aaKnown RBP9.18□□□□□ -0.94
HERPUD1-209ENST00000564678 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
HERPUD1-209ENST00000564678 RGPD8O14715 1765 aaPredicted RBP9.18□□□□□ -0.94
HERPUD1-209ENST00000564678 HSP90AB2PQ58FF8 381 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 ZBTB40Q9NUA8 1239 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 ITPRIPQ8IWB1 547 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 FMN2Q9NZ56 1722 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 MAP3K19Q56UN5 1328 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 ADAMTSL3P82987 1691 aa9.17□□□□□ -0.94
HERPUD1-209ENST00000564678 KDRP35968 1356 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 CARNS1A5YM72 827 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 TWISTNBQ3B726 338 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 TMEM57Q8N5G2 664 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 PEAK1Q9H792 1746 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 CHL1O00533 1208 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 NLRP6P59044 892 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 AMHR2Q16671 573 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 THUMPD2Q9BTF0 503 aaKnown RBP9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 PDZRN3Q9UPQ7 1066 aa9.16□□□□□ -0.94
HERPUD1-209ENST00000564678 KIAA0232Q92628 1395 aa9.15□□□□□ -0.94
HERPUD1-209ENST00000564678 HTATSF1O43719 755 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-209ENST00000564678 PAK3O75914 559 aaPredicted RBP9.15□□□□□ -0.94
HERPUD1-209ENST00000564678 AMPHP49418 695 aa9.15□□□□□ -0.94
HERPUD1-209ENST00000564678 SMC5Q8IY18 1101 aa9.15□□□□□ -0.94
HERPUD1-209ENST00000564678 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 API5Q9BZZ5 524 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 PIK3C2AO00443 1686 aa9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 FAM83GA6ND36 823 aa9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 PHF8Q9UPP1 1060 aa9.14□□□□□ -0.95
HERPUD1-209ENST00000564678 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-209ENST00000564678 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
HERPUD1-209ENST00000564678 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
HERPUD1-209ENST00000564678 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
HERPUD1-209ENST00000564678 ABCC4O15439 1325 aa9.13□□□□□ -0.95
HERPUD1-209ENST00000564678 HOXC9P31274 260 aa9.12□□□□□ -0.95
HERPUD1-209ENST00000564678 DCTN1Q14203 1278 aa9.12□□□□□ -0.95
HERPUD1-209ENST00000564678 EYA1Q99502 592 aa9.12□□□□□ -0.95
HERPUD1-209ENST00000564678 RTL1A6NKG5 1358 aa9.12□□□□□ -0.95
HERPUD1-209ENST00000564678 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
HERPUD1-209ENST00000564678 MFSD10Q14728 455 aa9.12□□□□□ -0.95
HERPUD1-209ENST00000564678 NPHP4O75161 1426 aaPredicted RBP9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 CRB1P82279 1406 aa9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 ELL2O00472 640 aaPredicted RBP9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 SOX12O15370 315 aa9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 MTHFSDQ2M296 383 aaKnown RBP9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 GCC1Q96CN9 775 aa9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 BABAM1Q9NWV8 329 aa9.11□□□□□ -0.95
HERPUD1-209ENST00000564678 PTPRCP08575 1304 aa9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 SOS1Q07889 1333 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 KCNH5Q8NCM2 988 aa9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 MARF1Q9Y4F3 1742 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 NUCB1Q02818 461 aa9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 TTLL12Q14166 644 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 INTS3Q68E01 1043 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 MCM10Q7L590 875 aa9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 UPF2Q9HAU5 1272 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-209ENST00000564678 IRF6O14896 467 aa9.09□□□□□ -0.95
HERPUD1-209ENST00000564678 PSME1Q06323 249 aa9.09□□□□□ -0.95
HERPUD1-209ENST00000564678 IP6K1Q92551 441 aa9.09□□□□□ -0.95
HERPUD1-209ENST00000564678 DDX27Q96GQ7 796 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-209ENST00000564678 IGSF5Q9NSI5 407 aa9.09□□□□□ -0.95
HERPUD1-209ENST00000564678 ZNF330Q9Y3S2 320 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-209ENST00000564678 USP19O94966 1318 aa9.08□□□□□ -0.96
HERPUD1-209ENST00000564678 GNAT3A8MTJ3 354 aa9.08□□□□□ -0.96
HERPUD1-209ENST00000564678 MAP2K5Q13163 448 aa9.08□□□□□ -0.96
HERPUD1-209ENST00000564678 ESCO1Q5FWF5 840 aa9.08□□□□□ -0.96
HERPUD1-209ENST00000564678 FECHP22830 423 aa9.07□□□□□ -0.96
HERPUD1-209ENST00000564678 CHD1LQ86WJ1 897 aa9.07□□□□□ -0.96
HERPUD1-209ENST00000564678 TSPYL4Q9UJ04 414 aa9.07□□□□□ -0.96
HERPUD1-209ENST00000564678 NWD1Q149M9 1564 aa9.07□□□□□ -0.96
HERPUD1-209ENST00000564678 REPIN1Q9BWE0 567 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-209ENST00000564678 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
HERPUD1-209ENST00000564678 CACNA1FO60840 1977 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 FOXO3O43524 673 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 NUTM2GQ5VZR2 741 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 RPAP2Q8IXW5 612 aaPredicted RBP9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 OXER1Q8TDS5 423 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 PCDHB8Q9UN66 801 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 PHRF1Q9P1Y6 1649 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 SEC24BO95487 1268 aa9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-209ENST00000564678 IVNS1ABPQ9Y6Y0 642 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms