RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
CCNF-204ENST00000564333 C19orf44Q9H6X5 657 aa20.59■□□□□ 0.89
CCNF-204ENST00000564333 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
CCNF-204ENST00000564333 DCCP43146 1447 aa20.58■□□□□ 0.89
CCNF-204ENST00000564333 HSPA2P54652 639 aa20.58■□□□□ 0.88
CCNF-204ENST00000564333 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.88
CCNF-204ENST00000564333 OVOS2A0A0G2JMS6 1433 aa20.58■□□□□ 0.88
CCNF-204ENST00000564333 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
CCNF-204ENST00000564333 ANKRD24Q8TF21 1146 aa20.57■□□□□ 0.88
CCNF-204ENST00000564333 SIPA1L3O60292 1781 aaPredicted RBP20.57■□□□□ 0.88
CCNF-204ENST00000564333 HMMRO75330 724 aa20.57■□□□□ 0.88
CCNF-204ENST00000564333 PLEKHO1Q53GL0 409 aaPredicted RBP20.57■□□□□ 0.88
CCNF-204ENST00000564333 PLEKHM2Q8IWE5 1019 aa20.57■□□□□ 0.88
CCNF-204ENST00000564333 HDGFL1Q5TGJ6 251 aa20.56■□□□□ 0.88
CCNF-204ENST00000564333 GSPT1P15170 499 aaKnown RBP20.55■□□□□ 0.88
CCNF-204ENST00000564333 RBM25P49756 843 aaKnown RBP20.55■□□□□ 0.88
CCNF-204ENST00000564333 AMOTQ4VCS5 1084 aa20.55■□□□□ 0.88
CCNF-204ENST00000564333 TBC1D9Q6ZT07 1266 aa20.55■□□□□ 0.88
CCNF-204ENST00000564333 LGR6Q9HBX8 967 aa20.55■□□□□ 0.88
CCNF-204ENST00000564333 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
CCNF-204ENST00000564333 ADAMTS7Q9UKP4 1686 aa20.54■□□□□ 0.88
CCNF-204ENST00000564333 CRYBG1Q9Y4K1 1723 aa20.54■□□□□ 0.88
CCNF-204ENST00000564333 CDC45O75419 566 aa20.54■□□□□ 0.88
CCNF-204ENST00000564333 GNAI2P04899 355 aa20.54■□□□□ 0.88
CCNF-204ENST00000564333 TTC22Q5TAA0 569 aa20.54■□□□□ 0.88
CCNF-204ENST00000564333 EIF4A1P60842 406 aaKnown RBP20.53■□□□□ 0.88
CCNF-204ENST00000564333 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
CCNF-204ENST00000564333 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
CCNF-204ENST00000564333 HOXB7P09629 217 aa20.53■□□□□ 0.88
CCNF-204ENST00000564333 ATF3P18847 181 aa20.53■□□□□ 0.88
CCNF-204ENST00000564333 TEFQ10587 303 aa20.53■□□□□ 0.88
CCNF-204ENST00000564333 GNAI3P08754 354 aa20.52■□□□□ 0.88
CCNF-204ENST00000564333 C1orf141Q5JVX7 400 aa20.52■□□□□ 0.88
CCNF-204ENST00000564333 C16orf71Q8IYS4 520 aaPredicted RBP20.51■□□□□ 0.87
CCNF-204ENST00000564333 APBB1O00213 710 aa20.51■□□□□ 0.87
CCNF-204ENST00000564333 SMARCA5O60264 1052 aaPredicted RBP20.51■□□□□ 0.87
CCNF-204ENST00000564333 MPRIPQ6WCQ1 1025 aa20.51■□□□□ 0.87
CCNF-204ENST00000564333 ANTXR1Q9H6X2 564 aa20.51■□□□□ 0.87
CCNF-204ENST00000564333 AXIN2Q9Y2T1 843 aa20.51■□□□□ 0.87
CCNF-204ENST00000564333 COL18A1P39060 1754 aa20.5■□□□□ 0.87
CCNF-204ENST00000564333 OTUD7AQ8TE49 926 aaPredicted RBP20.5■□□□□ 0.87
CCNF-204ENST00000564333 ERBB3P21860 1342 aa20.5■□□□□ 0.87
CCNF-204ENST00000564333 BTBD11A6QL63 1104 aa20.49■□□□□ 0.87
CCNF-204ENST00000564333 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
CCNF-204ENST00000564333 FRAT2O75474 233 aaPredicted RBP20.49■□□□□ 0.87
CCNF-204ENST00000564333 TUBGCP6Q96RT7 1819 aa20.49■□□□□ 0.87
CCNF-204ENST00000564333 HSCBQ8IWL3 235 aa20.49■□□□□ 0.87
CCNF-204ENST00000564333 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
CCNF-204ENST00000564333 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
CCNF-204ENST00000564333 KCNQ3O43525 872 aa20.48■□□□□ 0.87
CCNF-204ENST00000564333 IL27Q8NEV9 243 aa20.48■□□□□ 0.87
CCNF-204ENST00000564333 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
CCNF-204ENST00000564333 ABCC6O95255 1503 aa20.48■□□□□ 0.87
CCNF-204ENST00000564333 EIF2S2P20042 333 aaKnown RBP20.47■□□□□ 0.87
CCNF-204ENST00000564333 SCN11AQ9UI33 1791 aa20.47■□□□□ 0.87
CCNF-204ENST00000564333 TNS3Q68CZ2 1445 aa20.47■□□□□ 0.87
CCNF-204ENST00000564333 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
CCNF-204ENST00000564333 CHPF2Q9P2E5 772 aa20.47■□□□□ 0.87
CCNF-204ENST00000564333 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
CCNF-204ENST00000564333 LRRFIP2Q9Y608 721 aaKnown RBP20.45■□□□□ 0.86
CCNF-204ENST00000564333 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
CCNF-204ENST00000564333 NPHP3Q7Z494 1330 aa20.45■□□□□ 0.86
CCNF-204ENST00000564333 UBTFL1P0CB47 393 aaPredicted RBP20.44■□□□□ 0.86
CCNF-204ENST00000564333 ATP8B2P98198 1209 aa20.44■□□□□ 0.86
CCNF-204ENST00000564333 SNX21Q969T3 373 aa20.44■□□□□ 0.86
CCNF-204ENST00000564333 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
CCNF-204ENST00000564333 STRCQ7RTU9 1775 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 PNMA6EA0A0J9YXQ4 647 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 CADPS2Q86UW7 1296 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
CCNF-204ENST00000564333 SDSP20132 328 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 KIF2CQ99661 725 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 SRCIN1Q9C0H9 1055 aa20.43■□□□□ 0.86
CCNF-204ENST00000564333 SPRYD3Q8NCJ5 442 aa20.42■□□□□ 0.86
CCNF-204ENST00000564333 C5P01031 1676 aa20.42■□□□□ 0.86
CCNF-204ENST00000564333 PKD1L3Q7Z443 1732 aa20.41■□□□□ 0.86
CCNF-204ENST00000564333 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
CCNF-204ENST00000564333 OSBPL3Q9H4L5 887 aa20.41■□□□□ 0.86
CCNF-204ENST00000564333 MEGF6O75095 1541 aa20.41■□□□□ 0.86
CCNF-204ENST00000564333 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
CCNF-204ENST00000564333 CASC1Q6TDU7 716 aa20.41■□□□□ 0.86
CCNF-204ENST00000564333 DNAAF4Q8WXU2 420 aa20.4■□□□□ 0.86
CCNF-204ENST00000564333 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
CCNF-204ENST00000564333 ADCY9O60503 1353 aa20.4■□□□□ 0.86
CCNF-204ENST00000564333 PDE1AP54750 535 aa20.39■□□□□ 0.86
CCNF-204ENST00000564333 NLRP2Q9NX02 1062 aa20.39■□□□□ 0.86
CCNF-204ENST00000564333 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.86
CCNF-204ENST00000564333 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
CCNF-204ENST00000564333 SALL3Q9BXA9 1300 aa20.39■□□□□ 0.85
CCNF-204ENST00000564333 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
CCNF-204ENST00000564333 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
CCNF-204ENST00000564333 ANXA1P04083 346 aa20.38■□□□□ 0.85
CCNF-204ENST00000564333 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
CCNF-204ENST00000564333 L1TD1Q5T7N2 865 aaKnown RBP20.38■□□□□ 0.85
CCNF-204ENST00000564333 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
CCNF-204ENST00000564333 CHMP5Q9NZZ3 219 aa20.37■□□□□ 0.85
CCNF-204ENST00000564333 PLEKHG2Q9H7P9 1386 aa20.37■□□□□ 0.85
CCNF-204ENST00000564333 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
CCNF-204ENST00000564333 MRC1P22897 1456 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms