RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 TMPOP42166 694 aaKnown RBP22■■□□□ 1.11
RNF40-206ENST00000564260 CCDC184Q52MB2 194 aa22■■□□□ 1.11
RNF40-206ENST00000564260 IL17REQ8NFR9 667 aa22■■□□□ 1.11
RNF40-206ENST00000564260 NBPF14Q5TI25 921 aa21.99■■□□□ 1.11
RNF40-206ENST00000564260 PROM2Q8N271 834 aa21.99■■□□□ 1.11
RNF40-206ENST00000564260 LY75O60449 1722 aa21.99■■□□□ 1.11
RNF40-206ENST00000564260 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
RNF40-206ENST00000564260 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
RNF40-206ENST00000564260 ZNF831Q5JPB2 1677 aa21.98■■□□□ 1.11
RNF40-206ENST00000564260 KAT6BQ8WYB5 2073 aa21.96■■□□□ 1.11
RNF40-206ENST00000564260 RIPK4P57078 832 aa21.96■■□□□ 1.11
RNF40-206ENST00000564260 BABAM1Q9NWV8 329 aa21.96■■□□□ 1.11
RNF40-206ENST00000564260 CCNL1Q9UK58 526 aaPredicted RBP21.96■■□□□ 1.11
RNF40-206ENST00000564260 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
RNF40-206ENST00000564260 NUP188Q5SRE5 1749 aa21.95■■□□□ 1.1
RNF40-206ENST00000564260 LOC102724428A0A0B4J2F2 783 aa21.95■■□□□ 1.1
RNF40-206ENST00000564260 SIK1P57059 783 aa21.95■■□□□ 1.1
RNF40-206ENST00000564260 CCDC146Q8IYE0 955 aa21.94■■□□□ 1.1
RNF40-206ENST00000564260 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
RNF40-206ENST00000564260 PAPPAQ13219 1627 aa21.93■■□□□ 1.1
RNF40-206ENST00000564260 CICQ96RK0 1608 aaPredicted RBP21.92■■□□□ 1.1
RNF40-206ENST00000564260 CALD1Q05682 793 aaKnown RBP21.92■■□□□ 1.1
RNF40-206ENST00000564260 TAF7Q15545 349 aaPredicted RBP21.92■■□□□ 1.1
RNF40-206ENST00000564260 CCDC27Q2M243 656 aa21.92■■□□□ 1.1
RNF40-206ENST00000564260 MCM10Q7L590 875 aa21.92■■□□□ 1.1
RNF40-206ENST00000564260 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
RNF40-206ENST00000564260 SIPA1L3O60292 1781 aaPredicted RBP21.92■■□□□ 1.1
RNF40-206ENST00000564260 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
RNF40-206ENST00000564260 LRRC4BQ9NT99 713 aa21.91■■□□□ 1.1
RNF40-206ENST00000564260 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
RNF40-206ENST00000564260 APAF1O14727 1248 aa21.9■■□□□ 1.1
RNF40-206ENST00000564260 STK32BQ9NY57 414 aa21.9■■□□□ 1.1
RNF40-206ENST00000564260 VIRMAQ69YN4 1812 aaKnown RBP21.9■■□□□ 1.1
RNF40-206ENST00000564260 ATP6V1AP38606 617 aa21.88■■□□□ 1.09
RNF40-206ENST00000564260 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
RNF40-206ENST00000564260 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
RNF40-206ENST00000564260 DLG5Q8TDM6 1919 aa21.88■■□□□ 1.09
RNF40-206ENST00000564260 KCPQ6ZWJ8 1503 aa21.87■■□□□ 1.09
RNF40-206ENST00000564260 DCTN1Q14203 1278 aa21.87■■□□□ 1.09
RNF40-206ENST00000564260 AKT1S1Q96B36 256 aa21.87■■□□□ 1.09
RNF40-206ENST00000564260 TRIM35Q9UPQ4 493 aa21.87■■□□□ 1.09
RNF40-206ENST00000564260 C5P01031 1676 aa21.86■■□□□ 1.09
RNF40-206ENST00000564260 RC3H1Q5TC82 1133 aaKnown RBP21.86■■□□□ 1.09
RNF40-206ENST00000564260 FMNL2Q96PY5 1086 aa21.86■■□□□ 1.09
RNF40-206ENST00000564260 UBR2Q8IWV8 1755 aa21.86■■□□□ 1.09
RNF40-206ENST00000564260 FAM9BQ8IZU0 186 aa21.85■■□□□ 1.09
RNF40-206ENST00000564260 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
RNF40-206ENST00000564260 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
RNF40-206ENST00000564260 CNTNAP4Q9C0A0 1308 aa21.84■■□□□ 1.09
RNF40-206ENST00000564260 PTCD1O75127 700 aaKnown RBP21.84■■□□□ 1.09
RNF40-206ENST00000564260 NEUROD2Q15784 382 aa21.84■■□□□ 1.09
RNF40-206ENST00000564260 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
RNF40-206ENST00000564260 RRP7AQ9Y3A4 280 aaKnown RBP21.84■■□□□ 1.09
RNF40-206ENST00000564260 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
RNF40-206ENST00000564260 SLC39A6Q13433 755 aa21.83■■□□□ 1.09
RNF40-206ENST00000564260 SLC4A9Q96Q91 983 aa21.83■■□□□ 1.09
RNF40-206ENST00000564260 ITPK1Q13572 414 aa21.82■■□□□ 1.08
RNF40-206ENST00000564260 MIER1Q8N108 512 aa21.82■■□□□ 1.08
RNF40-206ENST00000564260 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
RNF40-206ENST00000564260 QSER1Q2KHR3 1735 aa21.81■■□□□ 1.08
RNF40-206ENST00000564260 ZNF496Q96IT1 587 aaPredicted RBP21.81■■□□□ 1.08
RNF40-206ENST00000564260 AK7Q96M32 723 aa21.81■■□□□ 1.08
RNF40-206ENST00000564260 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
RNF40-206ENST00000564260 IL16Q14005 1332 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 TAF1LQ8IZX4 1826 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 STARD3NLO95772 234 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 ADRA2BP18089 450 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 SSFA2P28290 1259 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 R3HDM1Q15032 1099 aaKnown RBP21.8■■□□□ 1.08
RNF40-206ENST00000564260 LINC00116Q8NCU8 138 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 TFCP2L1Q9NZI6 479 aa21.8■■□□□ 1.08
RNF40-206ENST00000564260 CHL1O00533 1208 aa21.79■■□□□ 1.08
RNF40-206ENST00000564260 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
RNF40-206ENST00000564260 ZNF827Q17R98 1081 aa21.79■■□□□ 1.08
RNF40-206ENST00000564260 SLC16A10Q8TF71 515 aa21.79■■□□□ 1.08
RNF40-206ENST00000564260 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
RNF40-206ENST00000564260 TSPYL4Q9UJ04 414 aa21.79■■□□□ 1.08
RNF40-206ENST00000564260 COL5A3P25940 1745 aaPredicted RBP21.78■■□□□ 1.08
RNF40-206ENST00000564260 GNAI1P63096 354 aa21.78■■□□□ 1.08
RNF40-206ENST00000564260 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
RNF40-206ENST00000564260 KDM3BQ7LBC6 1761 aa21.78■■□□□ 1.08
RNF40-206ENST00000564260 ZNF853P0CG23 659 aa21.77■■□□□ 1.08
RNF40-206ENST00000564260 KCNQ4P56696 695 aa21.77■■□□□ 1.08
RNF40-206ENST00000564260 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
RNF40-206ENST00000564260 EIF4A1P60842 406 aaKnown RBP21.76■■□□□ 1.07
RNF40-206ENST00000564260 TJP1Q07157 1748 aa21.76■■□□□ 1.07
RNF40-206ENST00000564260 HOXB7P09629 217 aa21.75■■□□□ 1.07
RNF40-206ENST00000564260 CYP19A1P11511 503 aaPredicted RBP21.75■■□□□ 1.07
RNF40-206ENST00000564260 DNAJC10Q8IXB1 793 aa21.75■■□□□ 1.07
RNF40-206ENST00000564260 CHMP4AQ9BY43 222 aa21.75■■□□□ 1.07
RNF40-206ENST00000564260 RTCBQ9Y3I0 505 aaKnown RBP21.75■■□□□ 1.07
RNF40-206ENST00000564260 SOS1Q07889 1333 aaPredicted RBP21.75■■□□□ 1.07
RNF40-206ENST00000564260 RPS6KA4O75676 772 aa21.74■■□□□ 1.07
RNF40-206ENST00000564260 CRKLP46109 303 aaKnown RBP21.74■■□□□ 1.07
RNF40-206ENST00000564260 CCDC87Q9NVE4 849 aa21.74■■□□□ 1.07
RNF40-206ENST00000564260 PNPLA7Q6ZV29 1317 aa21.74■■□□□ 1.07
RNF40-206ENST00000564260 KCNQ3O43525 872 aa21.73■■□□□ 1.07
RNF40-206ENST00000564260 PSDA5PKW4 1024 aaPredicted RBP21.72■■□□□ 1.07
RNF40-206ENST00000564260 GNPATO15228 680 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 261 ms