RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 CICQ96RK0 1608 aaPredicted RBP11.73□□□□□ -0.53
NSMCE1-206ENST00000563900 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
NSMCE1-206ENST00000563900 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
NSMCE1-206ENST00000563900 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
NSMCE1-206ENST00000563900 CABP4P57796 275 aa11.72□□□□□ -0.53
NSMCE1-206ENST00000563900 DLG5Q8TDM6 1919 aa11.72□□□□□ -0.53
NSMCE1-206ENST00000563900 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
NSMCE1-206ENST00000563900 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-206ENST00000563900 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
NSMCE1-206ENST00000563900 PNNQ9H307 717 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-206ENST00000563900 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
NSMCE1-206ENST00000563900 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
NSMCE1-206ENST00000563900 C5P01031 1676 aa11.71□□□□□ -0.54
NSMCE1-206ENST00000563900 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.54
NSMCE1-206ENST00000563900 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 QSER1Q2KHR3 1735 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 SIK1P57059 783 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
NSMCE1-206ENST00000563900 CASZ1Q86V15 1759 aa11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 KCNQ4P56696 695 aa11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 R3HDM1Q15032 1099 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 SLC15A2Q16348 729 aa11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
NSMCE1-206ENST00000563900 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 ITPK1Q13572 414 aa11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 RUNDC1Q96C34 613 aa11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 C4BP0C0L5 1744 aa11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 COL5A3P25940 1745 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 TJP1Q07157 1748 aa11.68□□□□□ -0.54
NSMCE1-206ENST00000563900 NEFMP07197 916 aa11.67□□□□□ -0.54
NSMCE1-206ENST00000563900 TMPOP42166 694 aaKnown RBP11.67□□□□□ -0.54
NSMCE1-206ENST00000563900 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
NSMCE1-206ENST00000563900 MCM10Q7L590 875 aa11.67□□□□□ -0.54
NSMCE1-206ENST00000563900 CCDC146Q8IYE0 955 aa11.67□□□□□ -0.54
NSMCE1-206ENST00000563900 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
NSMCE1-206ENST00000563900 TEFQ10587 303 aa11.66□□□□□ -0.54
NSMCE1-206ENST00000563900 SLC39A6Q13433 755 aa11.66□□□□□ -0.54
NSMCE1-206ENST00000563900 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
NSMCE1-206ENST00000563900 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
NSMCE1-206ENST00000563900 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
NSMCE1-206ENST00000563900 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
NSMCE1-206ENST00000563900 LRP5O75197 1615 aa11.65□□□□□ -0.54
NSMCE1-206ENST00000563900 HMGB2P26583 209 aaKnown RBP11.65□□□□□ -0.54
NSMCE1-206ENST00000563900 PDGFDQ9GZP0 370 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-206ENST00000563900 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.55
NSMCE1-206ENST00000563900 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 PNPLA7Q6ZV29 1317 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 PTCD1O75127 700 aaKnown RBP11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 RIPK4P57078 832 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
NSMCE1-206ENST00000563900 COL24A1Q17RW2 1714 aa11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 ZNF496Q96IT1 587 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-206ENST00000563900 BTBD11A6QL63 1104 aa11.62□□□□□ -0.55
NSMCE1-206ENST00000563900 KCNQ3O43525 872 aa11.62□□□□□ -0.55
NSMCE1-206ENST00000563900 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
NSMCE1-206ENST00000563900 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-206ENST00000563900 RC3H1Q5TC82 1133 aaKnown RBP11.62□□□□□ -0.55
NSMCE1-206ENST00000563900 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
NSMCE1-206ENST00000563900 CCER2I3L3R5 266 aa11.61□□□□□ -0.55
NSMCE1-206ENST00000563900 APAF1O14727 1248 aa11.61□□□□□ -0.55
NSMCE1-206ENST00000563900 ZBTB22O15209 634 aa11.61□□□□□ -0.55
NSMCE1-206ENST00000563900 DNAJC10Q8IXB1 793 aa11.61□□□□□ -0.55
NSMCE1-206ENST00000563900 CYP19A1P11511 503 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 SSFA2P28290 1259 aa11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 AK7Q96M32 723 aa11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 TFCP2L1Q9NZI6 479 aa11.6□□□□□ -0.55
NSMCE1-206ENST00000563900 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-206ENST00000563900 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-206ENST00000563900 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
NSMCE1-206ENST00000563900 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
NSMCE1-206ENST00000563900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 GNPATO15228 680 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 SLC16A10Q8TF71 515 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 MTFR1LQ9H019 292 aa11.58□□□□□ -0.56
NSMCE1-206ENST00000563900 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms