RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 DMTNQ08495 405 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 ARHGAP45Q92619 1136 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
CCDC187-201ENST00000563590 IFT57Q9NWB7 429 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 ABCC4O15439 1325 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 DIP2BQ9P265 1576 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 CWC22Q9HCG8 908 aaKnown RBP15.37■□□□□ 0.05
CCDC187-201ENST00000563590 FCHSD2O94868 740 aa15.37■□□□□ 0.05
CCDC187-201ENST00000563590 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 MCCP23508 829 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
CCDC187-201ENST00000563590 MYRIPQ8NFW9 859 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 PTCH1Q13635 1447 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 MCM5P33992 734 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
CCDC187-201ENST00000563590 LTKP29376 864 aa15.35■□□□□ 0.05
CCDC187-201ENST00000563590 DIP2CQ9Y2E4 1556 aa15.35■□□□□ 0.05
CCDC187-201ENST00000563590 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
CCDC187-201ENST00000563590 SDSP20132 328 aa15.35■□□□□ 0.05
CCDC187-201ENST00000563590 OS9Q13438 667 aaPredicted RBP15.35■□□□□ 0.05
CCDC187-201ENST00000563590 AMOTL2Q9Y2J4 779 aa15.35■□□□□ 0.05
CCDC187-201ENST00000563590 GADD45BO75293 160 aaPredicted RBP15.35■□□□□ 0.05
CCDC187-201ENST00000563590 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
CCDC187-201ENST00000563590 ZBTB22O15209 634 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 DCTPP1Q9H773 170 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 GLI2P10070 1586 aa15.34■□□□□ 0.05
CCDC187-201ENST00000563590 GNAI1P63096 354 aa15.33■□□□□ 0.05
CCDC187-201ENST00000563590 C16orf45Q96MC5 204 aaPredicted RBP15.33■□□□□ 0.05
CCDC187-201ENST00000563590 TMX3Q96JJ7 454 aa15.33■□□□□ 0.04
CCDC187-201ENST00000563590 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
CCDC187-201ENST00000563590 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
CCDC187-201ENST00000563590 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
CCDC187-201ENST00000563590 NUDT16Q96DE0 195 aaKnown RBP15.33■□□□□ 0.04
CCDC187-201ENST00000563590 GIMAP6Q6P9H5 292 aa15.32■□□□□ 0.04
CCDC187-201ENST00000563590 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
CCDC187-201ENST00000563590 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 FOXO3O43524 673 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 ANKLE2Q86XL3 938 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC187-201ENST00000563590 ZNF330Q9Y3S2 320 aaPredicted RBP15.31■□□□□ 0.04
CCDC187-201ENST00000563590 V9GYY5 206 aaPredicted RBP15.31■□□□□ 0.04
CCDC187-201ENST00000563590 PPLO60437 1756 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
CCDC187-201ENST00000563590 DDX54Q8TDD1 881 aaKnown RBP15.31■□□□□ 0.04
CCDC187-201ENST00000563590 PRIMPOLQ96LW4 560 aa15.31■□□□□ 0.04
CCDC187-201ENST00000563590 VPS37CA5D8V6 355 aaPredicted RBP15.3■□□□□ 0.04
CCDC187-201ENST00000563590 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 KCNJ4P48050 445 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 USP48Q86UV5 1035 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 ERC2O15083 957 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
CCDC187-201ENST00000563590 GOLGA6L6A8MZA4 724 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 EXOC6BQ9Y2D4 811 aa15.3■□□□□ 0.04
CCDC187-201ENST00000563590 HSP90AB2PQ58FF8 381 aa15.29■□□□□ 0.04
CCDC187-201ENST00000563590 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
CCDC187-201ENST00000563590 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
CCDC187-201ENST00000563590 ANXA1P04083 346 aa15.29■□□□□ 0.04
CCDC187-201ENST00000563590 CAMK4Q16566 473 aa15.29■□□□□ 0.04
CCDC187-201ENST00000563590 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 FBXW7Q969H0 707 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 ARHGEF28Q8N1W1 1705 aaKnown RBP15.28■□□□□ 0.04
CCDC187-201ENST00000563590 NLRP6P59044 892 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 GTPBP4Q9BZE4 634 aaKnown RBP15.28■□□□□ 0.04
CCDC187-201ENST00000563590 CNPY2Q9Y2B0 182 aa15.28■□□□□ 0.04
CCDC187-201ENST00000563590 LETM1O95202 739 aaPredicted RBP15.27■□□□□ 0.04
CCDC187-201ENST00000563590 ZNF853P0CG23 659 aa15.27■□□□□ 0.04
CCDC187-201ENST00000563590 YTHDC2Q9H6S0 1430 aaKnown RBP15.27■□□□□ 0.04
CCDC187-201ENST00000563590 ZNF710Q8N1W2 664 aa15.27■□□□□ 0.04
CCDC187-201ENST00000563590 CAMSAP1Q5T5Y3 1602 aa15.27■□□□□ 0.03
CCDC187-201ENST00000563590 CEP85Q6P2H3 762 aa15.27■□□□□ 0.03
CCDC187-201ENST00000563590 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.03
CCDC187-201ENST00000563590 REREQ9P2R6 1566 aa15.27■□□□□ 0.03
CCDC187-201ENST00000563590 TPD52L1Q16890 204 aaPredicted RBP15.26■□□□□ 0.03
CCDC187-201ENST00000563590 LMTK2Q8IWU2 1503 aa15.26■□□□□ 0.03
CCDC187-201ENST00000563590 CD163L1Q9NR16 1453 aa15.26■□□□□ 0.03
CCDC187-201ENST00000563590 TRIM5Q9C035 493 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
CCDC187-201ENST00000563590 KNDC1Q76NI1 1749 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 METP08581 1390 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 HSPA2P54652 639 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 MEIS3Q99687 375 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 BRD1O95696 1058 aa15.25■□□□□ 0.03
CCDC187-201ENST00000563590 ATP10DQ9P241 1426 aa15.24■□□□□ 0.03
CCDC187-201ENST00000563590 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms