RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
CCP110-206ENST00000562616 PHLPP1O60346 1717 aa12.16□□□□□ -0.46
CCP110-206ENST00000562616 CLCN1P35523 988 aa12.16□□□□□ -0.46
CCP110-206ENST00000562616 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
CCP110-206ENST00000562616 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
CCP110-206ENST00000562616 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.46
CCP110-206ENST00000562616 PTGDRQ13258 359 aa12.15□□□□□ -0.46
CCP110-206ENST00000562616 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
CCP110-206ENST00000562616 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
CCP110-206ENST00000562616 DDX17Q92841 729 aaKnown RBP12.14□□□□□ -0.47
CCP110-206ENST00000562616 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
CCP110-206ENST00000562616 KTN1Q86UP2 1357 aaKnown RBP12.14□□□□□ -0.47
CCP110-206ENST00000562616 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
CCP110-206ENST00000562616 ATAD2Q6PL18 1390 aa12.13□□□□□ -0.47
CCP110-206ENST00000562616 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
CCP110-206ENST00000562616 PPIP5K1Q6PFW1 1433 aa12.13□□□□□ -0.47
CCP110-206ENST00000562616 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
CCP110-206ENST00000562616 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
CCP110-206ENST00000562616 RALBP1Q15311 655 aa12.13□□□□□ -0.47
CCP110-206ENST00000562616 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
CCP110-206ENST00000562616 DDX12PQ92771 950 aa12.13□□□□□ -0.47
CCP110-206ENST00000562616 JCADQ9P266 1359 aa12.12□□□□□ -0.47
CCP110-206ENST00000562616 COL16A1Q07092 1604 aaPredicted RBP12.11□□□□□ -0.47
CCP110-206ENST00000562616 FOXO3O43524 673 aa12.11□□□□□ -0.47
CCP110-206ENST00000562616 TBC1D12O60347 775 aa12.11□□□□□ -0.47
CCP110-206ENST00000562616 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
CCP110-206ENST00000562616 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCP110-206ENST00000562616 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
CCP110-206ENST00000562616 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
CCP110-206ENST00000562616 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
CCP110-206ENST00000562616 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
CCP110-206ENST00000562616 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
CCP110-206ENST00000562616 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
CCP110-206ENST00000562616 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
CCP110-206ENST00000562616 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
CCP110-206ENST00000562616 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
CCP110-206ENST00000562616 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
CCP110-206ENST00000562616 NPC1L1Q9UHC9 1359 aa12.09□□□□□ -0.47
CCP110-206ENST00000562616 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
CCP110-206ENST00000562616 PXDNQ92626 1479 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 SPDYE5A6NIY4 337 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 Q6ZNB5 142 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
CCP110-206ENST00000562616 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 ACEP12821 1306 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 MYBBP1AQ9BQG0 1328 aaKnown RBP12.08□□□□□ -0.48
CCP110-206ENST00000562616 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 LRP6O75581 1613 aa12.08□□□□□ -0.48
CCP110-206ENST00000562616 PSME1Q06323 249 aa12.07□□□□□ -0.48
CCP110-206ENST00000562616 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
CCP110-206ENST00000562616 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
CCP110-206ENST00000562616 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
CCP110-206ENST00000562616 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
CCP110-206ENST00000562616 TRPM3Q9HCF6 1732 aaPredicted RBP12.07□□□□□ -0.48
CCP110-206ENST00000562616 CCDC184Q52MB2 194 aa12.06□□□□□ -0.48
CCP110-206ENST00000562616 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
CCP110-206ENST00000562616 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
CCP110-206ENST00000562616 POLR3AO14802 1390 aaPredicted RBP12.06□□□□□ -0.48
CCP110-206ENST00000562616 ZNF772Q68DY9 489 aaPredicted RBP12.06□□□□□ -0.48
CCP110-206ENST00000562616 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
CCP110-206ENST00000562616 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
CCP110-206ENST00000562616 MON2Q7Z3U7 1717 aa12.05□□□□□ -0.48
CCP110-206ENST00000562616 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
CCP110-206ENST00000562616 A0A1W2PP64 1363 aa12.05□□□□□ -0.48
CCP110-206ENST00000562616 SRCAPQ6ZRS2 3230 aa12.05□□□□□ -0.48
CCP110-206ENST00000562616 MDM2Q00987 491 aaPredicted RBP12.04□□□□□ -0.48
CCP110-206ENST00000562616 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
CCP110-206ENST00000562616 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
CCP110-206ENST00000562616 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
CCP110-206ENST00000562616 CD163L1Q9NR16 1453 aa12.04□□□□□ -0.48
CCP110-206ENST00000562616 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
CCP110-206ENST00000562616 BRD4O60885 1362 aaPredicted RBP12.03□□□□□ -0.48
CCP110-206ENST00000562616 NRKQ7Z2Y5 1582 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
CCP110-206ENST00000562616 LRRC59Q96AG4 307 aaKnown RBP12.03□□□□□ -0.48
CCP110-206ENST00000562616 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 USP6P35125 1406 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
CCP110-206ENST00000562616 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 RXRBP28702 533 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 THSD4Q6ZMP0 1018 aa12.03□□□□□ -0.48
CCP110-206ENST00000562616 BANK1Q8NDB2 785 aa12.02□□□□□ -0.49
CCP110-206ENST00000562616 KCNK17Q96T54 332 aa12.02□□□□□ -0.49
CCP110-206ENST00000562616 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
CCP110-206ENST00000562616 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 NSD2O96028 1365 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 SPATA31A3Q5VYP0 1347 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 EVI5O60447 810 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 PDE4CQ08493 712 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 TMCO4Q5TGY1 634 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
CCP110-206ENST00000562616 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
CCP110-206ENST00000562616 CENPBP07199 599 aaPredicted RBP12□□□□□ -0.49
CCP110-206ENST00000562616 PPP2R1AP30153 589 aa12□□□□□ -0.49
CCP110-206ENST00000562616 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
CCP110-206ENST00000562616 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
CCP110-206ENST00000562616 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms