RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-221ENST00000561055 TMOD3Q9NYL9 352 aa12.75□□□□□ -0.37
RABGGTA-221ENST00000561055 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
RABGGTA-221ENST00000561055 C5P01031 1676 aa12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-221ENST00000561055 CABP4P57796 275 aa12.73□□□□□ -0.37
RABGGTA-221ENST00000561055 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-221ENST00000561055 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
RABGGTA-221ENST00000561055 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
RABGGTA-221ENST00000561055 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
RABGGTA-221ENST00000561055 RTF1Q92541 710 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-221ENST00000561055 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
RABGGTA-221ENST00000561055 PALLDQ8WX93 1383 aa12.71□□□□□ -0.37
RABGGTA-221ENST00000561055 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-221ENST00000561055 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
RABGGTA-221ENST00000561055 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.37
RABGGTA-221ENST00000561055 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
RABGGTA-221ENST00000561055 TJP1Q07157 1748 aa12.71□□□□□ -0.38
RABGGTA-221ENST00000561055 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-221ENST00000561055 RIPK4P57078 832 aa12.7□□□□□ -0.38
RABGGTA-221ENST00000561055 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
RABGGTA-221ENST00000561055 TEFQ10587 303 aa12.7□□□□□ -0.38
RABGGTA-221ENST00000561055 MIER1Q8N108 512 aa12.7□□□□□ -0.38
RABGGTA-221ENST00000561055 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
RABGGTA-221ENST00000561055 MCM10Q7L590 875 aa12.69□□□□□ -0.38
RABGGTA-221ENST00000561055 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
RABGGTA-221ENST00000561055 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 APAF1O14727 1248 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 SIK1P57059 783 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 DCTN1Q14203 1278 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
RABGGTA-221ENST00000561055 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
RABGGTA-221ENST00000561055 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
RABGGTA-221ENST00000561055 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
RABGGTA-221ENST00000561055 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
RABGGTA-221ENST00000561055 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
RABGGTA-221ENST00000561055 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
RABGGTA-221ENST00000561055 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-221ENST00000561055 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 NBPF14Q5TI25 921 aa12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 LAMB4A4D0S4 1761 aa12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
RABGGTA-221ENST00000561055 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
RABGGTA-221ENST00000561055 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
RABGGTA-221ENST00000561055 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
RABGGTA-221ENST00000561055 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
RABGGTA-221ENST00000561055 ITPK1Q13572 414 aa12.63□□□□□ -0.39
RABGGTA-221ENST00000561055 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
RABGGTA-221ENST00000561055 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-221ENST00000561055 HEG1Q9ULI3 1381 aa12.63□□□□□ -0.39
RABGGTA-221ENST00000561055 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
RABGGTA-221ENST00000561055 CHL1O00533 1208 aa12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 KCNQ4P56696 695 aa12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-221ENST00000561055 KCNQ3O43525 872 aa12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 CALD1Q05682 793 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 TEX13AQ9BXU3 409 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 CNTNAP4Q9C0A0 1308 aa12.61□□□□□ -0.39
RABGGTA-221ENST00000561055 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
RABGGTA-221ENST00000561055 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
RABGGTA-221ENST00000561055 IL16Q14005 1332 aa12.6□□□□□ -0.39
RABGGTA-221ENST00000561055 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-221ENST00000561055 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-221ENST00000561055 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
RABGGTA-221ENST00000561055 MIS18AQ9NYP9 233 aa12.59□□□□□ -0.39
RABGGTA-221ENST00000561055 SNRPA1P09661 255 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 GNAI1P63096 354 aa12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 FLAD1Q8NFF5 587 aa12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 TSPYL4Q9UJ04 414 aa12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 ZNF521Q96K83 1311 aa12.58□□□□□ -0.4
RABGGTA-221ENST00000561055 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-221ENST00000561055 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
RABGGTA-221ENST00000561055 INTS5Q6P9B9 1019 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-221ENST00000561055 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
RABGGTA-221ENST00000561055 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms