RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	EID1	Q9Y6B2	187 aa		10.55	□□□□□ -0.72
MARK3-222	ENST00000560731	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.55	□□□□□ -0.72
MARK3-222	ENST00000560731	ARHGAP23	Q9P227	1491 aa		10.55	□□□□□ -0.72
MARK3-222	ENST00000560731	LRPPRC	P42704	1394 aa	Known RBP	10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	ABCC11	Q96J66	1382 aa		10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	ASXL1	Q8IXJ9	1541 aa		10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	ADH1B	P00325	375 aa		10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	TXNDC2	Q86VQ3	553 aa		10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	SCUBE3	Q8IX30	993 aa		10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	PTPRM	P28827	1452 aa		10.54	□□□□□ -0.72
MARK3-222	ENST00000560731	SLIT1	O75093	1534 aa		10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	PLEKHG1	Q9ULL1	1385 aa		10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	GCGR	P47871	477 aa		10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	RSPH6A	Q9H0K4	717 aa		10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	PANK3	Q9H999	370 aa		10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	STK26	Q9P289	416 aa		10.53	□□□□□ -0.72
MARK3-222	ENST00000560731	TLL1	O43897	1013 aa		10.52	□□□□□ -0.73
MARK3-222	ENST00000560731	TBX22	Q9Y458	520 aa		10.52	□□□□□ -0.73
MARK3-222	ENST00000560731	SETD1B	Q9UPS6	1966 aa	Known RBP	10.52	□□□□□ -0.73
MARK3-222	ENST00000560731	MET	P08581	1390 aa		10.52	□□□□□ -0.73
MARK3-222	ENST00000560731	RIMS1	Q86UR5	1692 aa	Known RBP	10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	MED14	O60244	1454 aa		10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	RNF223	E7ERA6	249 aa		10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	ATP6V1A	P38606	617 aa		10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	ANKLE1	Q8NAG6	615 aa		10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	DLC1	Q96QB1	1528 aa		10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	EVC2	Q86UK5	1308 aa		10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	KTN1	Q86UP2	1357 aa	Known RBP	10.51	□□□□□ -0.73
MARK3-222	ENST00000560731	ADAMTS13	Q76LX8	1427 aa		10.5	□□□□□ -0.73
MARK3-222	ENST00000560731	RALBP1	Q15311	655 aa		10.5	□□□□□ -0.73
MARK3-222	ENST00000560731	SKIV2L	Q15477	1246 aa	Known RBP	10.5	□□□□□ -0.73
MARK3-222	ENST00000560731	PRAM1	Q96QH2	718 aa		10.5	□□□□□ -0.73
MARK3-222	ENST00000560731	POGK	Q9P215	609 aa		10.5	□□□□□ -0.73
MARK3-222	ENST00000560731	NRXN3	Q9Y4C0	1643 aa		10.5	□□□□□ -0.73
MARK3-222	ENST00000560731	PUS10	Q3MIT2	529 aa	Known RBP	10.49	□□□□□ -0.73
MARK3-222	ENST00000560731	GRIPAP1	Q4V328	841 aa		10.49	□□□□□ -0.73
MARK3-222	ENST00000560731	MORN1	Q5T089	497 aa		10.49	□□□□□ -0.73
MARK3-222	ENST00000560731	SLC6A16	Q9GZN6	736 aa		10.49	□□□□□ -0.73
MARK3-222	ENST00000560731	SETD1A	O15047	1707 aa	Known RBP	10.49	□□□□□ -0.73
MARK3-222	ENST00000560731	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	GFRA3	O60609	400 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	S1PR4	O95977	384 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	FUT2	Q10981	343 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	ANKLE2	Q86XL3	938 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	SPSB2	Q99619	263 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	TECPR2	O15040	1411 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	FAM135B	Q49AJ0	1406 aa		10.48	□□□□□ -0.73
MARK3-222	ENST00000560731	CD46	P15529	392 aa		10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	MYSM1	Q5VVJ2	828 aa		10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	WAPL	Q7Z5K2	1190 aa		10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	KNSTRN	Q9Y448	316 aa		10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	SALL2	Q9Y467	1007 aa	Predicted RBP	10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	NPC1L1	Q9UHC9	1359 aa		10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	QRICH2	Q9H0J4	1663 aa		10.47	□□□□□ -0.73
MARK3-222	ENST00000560731	SLC19A1	P41440	591 aa		10.46	□□□□□ -0.73
MARK3-222	ENST00000560731	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
MARK3-222	ENST00000560731	CCDC184	Q52MB2	194 aa		10.46	□□□□□ -0.73
MARK3-222	ENST00000560731		Q6ZNB5	142 aa		10.46	□□□□□ -0.73
MARK3-222	ENST00000560731	SLC26A8	Q96RN1	970 aa		10.46	□□□□□ -0.73
MARK3-222	ENST00000560731	CARD14	Q9BXL6	1004 aa		10.46	□□□□□ -0.73
MARK3-222	ENST00000560731	TBC1D2	Q9BYX2	928 aa		10.46	□□□□□ -0.73
MARK3-222	ENST00000560731	TULP4	Q9NRJ4	1543 aa		10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	PARD3	Q8TEW0	1356 aa		10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	NRG2	O14511	850 aa	Predicted RBP	10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	CENPB	P07199	599 aa	Predicted RBP	10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	DIXDC1	Q155Q3	683 aa		10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	YTHDC1	Q96MU7	727 aa	Known RBP	10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	CDK19	Q9BWU1	502 aa		10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	SLC12A5	Q9H2X9	1139 aa		10.45	□□□□□ -0.74
MARK3-222	ENST00000560731	PIK3R4	Q99570	1358 aa		10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	PLEKHH1	Q9ULM0	1364 aa		10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	FMNL1	O95466	1100 aa	Predicted RBP	10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	POLR3E	Q9NVU0	708 aa		10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	ZNF142	P52746	1687 aa	Predicted RBP	10.44	□□□□□ -0.74
MARK3-222	ENST00000560731	PTPRU	Q92729	1446 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	NINL	Q9Y2I6	1382 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	WASL	O00401	505 aa	Predicted RBP	10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	CLK2	P49760	499 aa	Known RBP	10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	SPIRE2	Q8WWL2	714 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	THAP11	Q96EK4	314 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	MRS2	Q9HD23	443 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	AMOTL2	Q9Y2J4	779 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	SLC27A5	Q9Y2P5	690 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	MYOM1	P52179	1685 aa		10.43	□□□□□ -0.74
MARK3-222	ENST00000560731	BRD4	O60885	1362 aa	Predicted RBP	10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	ATAD2	Q6PL18	1390 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	ROBO2	Q9HCK4	1378 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	USP46	P62068	366 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	SRPK2	P78362	688 aa	Known RBP	10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	FLII	Q13045	1269 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	TMC1	Q8TDI8	760 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	DIP2A	Q14689	1571 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	CPS1	P31327	1500 aa		10.42	□□□□□ -0.74
MARK3-222	ENST00000560731	KNDC1	Q76NI1	1749 aa		10.41	□□□□□ -0.74
MARK3-222	ENST00000560731	PPEF1	O14829	653 aa	Predicted RBP	10.41	□□□□□ -0.74

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