RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 NLRP6P59044 892 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
PCAT29-204ENST00000560655 HDAC1Q13547 482 aaPredicted RBP7.7□□□□□ -1.18
PCAT29-204ENST00000560655 EYA1Q99502 592 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 DDX19BQ9UMR2 479 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 IGSF1Q8N6C5 1336 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 KIF16BQ96L93 1317 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 FLT4P35916 1363 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 KDRP35968 1356 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 DLG5Q8TDM6 1919 aa7.7□□□□□ -1.18
PCAT29-204ENST00000560655 ZNF142P52746 1687 aaPredicted RBP7.7□□□□□ -1.18
PCAT29-204ENST00000560655 CRB1P82279 1406 aa7.69□□□□□ -1.18
PCAT29-204ENST00000560655 ZBTB7BO15156 539 aaPredicted RBP7.69□□□□□ -1.18
PCAT29-204ENST00000560655 MTHFSDQ2M296 383 aaKnown RBP7.69□□□□□ -1.18
PCAT29-204ENST00000560655 TWISTNBQ3B726 338 aaPredicted RBP7.69□□□□□ -1.18
PCAT29-204ENST00000560655 SMC5Q8IY18 1101 aa7.69□□□□□ -1.18
PCAT29-204ENST00000560655 FTSJ3Q8IY81 847 aaKnown RBP7.69□□□□□ -1.18
PCAT29-204ENST00000560655 PHF8Q9UPP1 1060 aa7.69□□□□□ -1.18
PCAT29-204ENST00000560655 PIK3C2AO00443 1686 aa7.69□□□□□ -1.18
PCAT29-204ENST00000560655 KIF24Q5T7B8 1368 aa7.69□□□□□ -1.18
PCAT29-204ENST00000560655 USP54Q70EL1 1684 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 ELL2O00472 640 aaPredicted RBP7.68□□□□□ -1.18
PCAT29-204ENST00000560655 SOX12O15370 315 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 FOXO3O43524 673 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 HOXC9P31274 260 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 AMPHP49418 695 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 MYT1Q01538 1121 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 MCM10Q7L590 875 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 NPM2Q86SE8 214 aaKnown RBP7.68□□□□□ -1.18
PCAT29-204ENST00000560655 RBM33Q96EV2 1170 aaKnown RBP7.68□□□□□ -1.18
PCAT29-204ENST00000560655 DNAJC5Q9H3Z4 198 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 ZSWIM6Q9HCJ5 1215 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 MARF1Q9Y4F3 1742 aaKnown RBP7.68□□□□□ -1.18
PCAT29-204ENST00000560655 USP19O94966 1318 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 NPHP4O75161 1426 aaPredicted RBP7.68□□□□□ -1.18
PCAT29-204ENST00000560655 ADGRL3Q9HAR2 1447 aa7.68□□□□□ -1.18
PCAT29-204ENST00000560655 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
PCAT29-204ENST00000560655 ITPRIPQ8IWB1 547 aa7.67□□□□□ -1.18
PCAT29-204ENST00000560655 ABTB2Q8N961 1025 aa7.67□□□□□ -1.18
PCAT29-204ENST00000560655 ABCC4O15439 1325 aa7.67□□□□□ -1.18
PCAT29-204ENST00000560655 KIAA0232Q92628 1395 aa7.67□□□□□ -1.18
PCAT29-204ENST00000560655 NWD1Q149M9 1564 aa7.67□□□□□ -1.18
PCAT29-204ENST00000560655 HTATSF1O43719 755 aaKnown RBP7.66□□□□□ -1.18
PCAT29-204ENST00000560655 KRT24Q2M2I5 525 aa7.66□□□□□ -1.18
PCAT29-204ENST00000560655 IP6K1Q92551 441 aa7.66□□□□□ -1.18
PCAT29-204ENST00000560655 GPR153Q6NV75 609 aa7.65□□□□□ -1.18
PCAT29-204ENST00000560655 ERICH6Q7L0X2 663 aa7.65□□□□□ -1.18
PCAT29-204ENST00000560655 SIRT2Q8IXJ6 389 aa7.65□□□□□ -1.18
PCAT29-204ENST00000560655 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
PCAT29-204ENST00000560655 API5Q9BZZ5 524 aaKnown RBP7.65□□□□□ -1.18
PCAT29-204ENST00000560655 RGS12O14924 1447 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 NUCB1Q02818 461 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 PSME1Q06323 249 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 ESCO1Q5FWF5 840 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 INTS3Q68E01 1043 aaKnown RBP7.64□□□□□ -1.19
PCAT29-204ENST00000560655 IL17REQ8NFR9 667 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 ORAI2Q96SN7 254 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 MIS18AQ9NYP9 233 aa7.64□□□□□ -1.19
PCAT29-204ENST00000560655 RTL1A6NKG5 1358 aa7.63□□□□□ -1.19
PCAT29-204ENST00000560655 MSH6P52701 1360 aa7.63□□□□□ -1.19
PCAT29-204ENST00000560655 ZNF467Q7Z7K2 595 aaPredicted RBP7.63□□□□□ -1.19
PCAT29-204ENST00000560655 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
PCAT29-204ENST00000560655 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
PCAT29-204ENST00000560655 CHMP4BQ9H444 224 aaKnown RBP7.63□□□□□ -1.19
PCAT29-204ENST00000560655 NFAT5O94916 1531 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 GNAT3A8MTJ3 354 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 PSEN1P49768 467 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 HAP1P54257 671 aaPredicted RBP7.62□□□□□ -1.19
PCAT29-204ENST00000560655 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 ARHGEF25Q86VW2 580 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 PROSER2Q86WR7 435 aaPredicted RBP7.62□□□□□ -1.19
PCAT29-204ENST00000560655 KCNH5Q8NCM2 988 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 RTF1Q92541 710 aaKnown RBP7.62□□□□□ -1.19
PCAT29-204ENST00000560655 NBPF4Q96M43 638 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 BABAM1Q9NWV8 329 aa7.62□□□□□ -1.19
PCAT29-204ENST00000560655 PTPRCP08575 1304 aa7.61□□□□□ -1.19
PCAT29-204ENST00000560655 G2E3Q7L622 706 aa7.61□□□□□ -1.19
PCAT29-204ENST00000560655 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
PCAT29-204ENST00000560655 C19orf44Q9H6X5 657 aa7.61□□□□□ -1.19
PCAT29-204ENST00000560655 C1orf115Q9H7X2 142 aa7.61□□□□□ -1.19
PCAT29-204ENST00000560655 TSPYL4Q9UJ04 414 aa7.61□□□□□ -1.19
PCAT29-204ENST00000560655 MST1RQ04912 1400 aa7.61□□□□□ -1.19
PCAT29-204ENST00000560655 RGS20O76081 388 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 GCP02774 474 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 TAF7Q15545 349 aaPredicted RBP7.6□□□□□ -1.19
PCAT29-204ENST00000560655 ARSIQ5FYB1 569 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 KRT28Q7Z3Y7 464 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 CHD1LQ86WJ1 897 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 USHBP1Q8N6Y0 703 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 GCC1Q96CN9 775 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 DCTPP1Q9H773 170 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 SLIT3O75094 1523 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 C1orf167Q5SNV9 1468 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 NCAPD2Q15021 1401 aa7.6□□□□□ -1.19
PCAT29-204ENST00000560655 MAP3K5Q99683 1374 aa7.59□□□□□ -1.19
PCAT29-204ENST00000560655 SOS1Q07889 1333 aaPredicted RBP7.59□□□□□ -1.19
PCAT29-204ENST00000560655 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
PCAT29-204ENST00000560655 XPCQ01831 940 aaPredicted RBP7.59□□□□□ -1.19
PCAT29-204ENST00000560655 ANKRD44Q8N8A2 993 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms