RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ZGPATQ8N5A5 531 aaKnown RBP23.07■■□□□ 1.28
SEMA4B-215ENST00000560089 FOXD4L4Q8WXT5 416 aaPredicted RBP23.07■■□□□ 1.28
SEMA4B-215ENST00000560089 NCKAP5LQ9HCH0 1330 aa23.07■■□□□ 1.28
SEMA4B-215ENST00000560089 PLEKHG1Q9ULL1 1385 aa23.06■■□□□ 1.28
SEMA4B-215ENST00000560089 NEUROD2Q15784 382 aa23.06■■□□□ 1.28
SEMA4B-215ENST00000560089 SMTNL1A8MU46 457 aa23.06■■□□□ 1.28
SEMA4B-215ENST00000560089 KCNF1Q9H3M0 494 aa23.06■■□□□ 1.28
SEMA4B-215ENST00000560089 ABCC11Q96J66 1382 aa23.06■■□□□ 1.28
SEMA4B-215ENST00000560089 CEP170BQ9Y4F5 1589 aaPredicted RBP23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 GTF2A1P52655 376 aaPredicted RBP23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 AXDND1Q5T1B0 1012 aaPredicted RBP23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 SAMD1Q6SPF0 538 aaPredicted RBP23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 KCNG1Q9UIX4 513 aa23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 NSD3Q9BZ95 1437 aa23.05■■□□□ 1.28
SEMA4B-215ENST00000560089 CYP2C19P33261 490 aa23.04■■□□□ 1.28
SEMA4B-215ENST00000560089 PLCB2Q00722 1185 aa23.04■■□□□ 1.28
SEMA4B-215ENST00000560089 BCCIPQ9P287 314 aaKnown RBP eCLIP23.04■■□□□ 1.28
SEMA4B-215ENST00000560089 CHD1LQ86WJ1 897 aa23.04■■□□□ 1.28
SEMA4B-215ENST00000560089 RASSF4Q9H2L5 321 aa23.04■■□□□ 1.28
SEMA4B-215ENST00000560089 TPM3P06753 285 aa23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 ITPRIPQ8IWB1 547 aa23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 ST7Q9NRC1 585 aa23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 ANKRD36BQ8N2N9 1353 aa23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 NOP2P46087 812 aaKnown RBP23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 ZNF397Q8NF99 534 aaPredicted RBP23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 RBM33Q96EV2 1170 aaKnown RBP23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
SEMA4B-215ENST00000560089 TMX1Q9H3N1 280 aa23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 AMOTL2Q9Y2J4 779 aa23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 SLIT1O75093 1534 aa23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 PTPRUQ92729 1446 aa23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 NOL10Q9BSC4 688 aaKnown RBP23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 ARHGAP23Q9P227 1491 aa23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 DDX19BQ9UMR2 479 aa23.02■■□□□ 1.28
SEMA4B-215ENST00000560089 FAM53CQ9NYF3 392 aa23■■□□□ 1.27
SEMA4B-215ENST00000560089 DHX16O60231 1041 aaKnown RBP23■■□□□ 1.27
SEMA4B-215ENST00000560089 KDM4AO75164 1064 aa23■■□□□ 1.27
SEMA4B-215ENST00000560089 KMT5BQ4FZB7 885 aa23■■□□□ 1.27
SEMA4B-215ENST00000560089 CNPY4Q8N129 248 aa23■■□□□ 1.27
SEMA4B-215ENST00000560089 CCDC112Q8NEF3 446 aa23■■□□□ 1.27
SEMA4B-215ENST00000560089 ZNF622Q969S3 477 aaKnown RBP eCLIP23■■□□□ 1.27
SEMA4B-215ENST00000560089 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
SEMA4B-215ENST00000560089 HCLS1P14317 486 aaPredicted RBP22.99■■□□□ 1.27
SEMA4B-215ENST00000560089 C16orf45Q96MC5 204 aaPredicted RBP22.98■■□□□ 1.27
SEMA4B-215ENST00000560089 SPC24Q8NBT2 197 aa22.98■■□□□ 1.27
SEMA4B-215ENST00000560089 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
SEMA4B-215ENST00000560089 GOLGA6L6A8MZA4 724 aa22.97■■□□□ 1.27
SEMA4B-215ENST00000560089 PRR29P0C7W0 189 aa22.97■■□□□ 1.27
SEMA4B-215ENST00000560089 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
SEMA4B-215ENST00000560089 CTR9Q6PD62 1173 aa22.96■■□□□ 1.27
SEMA4B-215ENST00000560089 SIRT1Q96EB6 747 aa22.96■■□□□ 1.27
SEMA4B-215ENST00000560089 MYCBPQ99417 103 aaPredicted RBP22.96■■□□□ 1.27
SEMA4B-215ENST00000560089 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
SEMA4B-215ENST00000560089 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
SEMA4B-215ENST00000560089 REC8O95072 547 aa22.95■■□□□ 1.27
SEMA4B-215ENST00000560089 PAXBP1Q9Y5B6 917 aa22.95■■□□□ 1.27
SEMA4B-215ENST00000560089 DLC1Q96QB1 1528 aa22.95■■□□□ 1.27
SEMA4B-215ENST00000560089 TNNT1P13805 278 aa22.95■■□□□ 1.26
SEMA4B-215ENST00000560089 ST18O60284 1047 aa22.95■■□□□ 1.26
SEMA4B-215ENST00000560089 CDC45O75419 566 aa22.95■■□□□ 1.26
SEMA4B-215ENST00000560089 TBX22Q9Y458 520 aa22.95■■□□□ 1.26
SEMA4B-215ENST00000560089 KCNA6P17658 529 aa22.94■■□□□ 1.26
SEMA4B-215ENST00000560089 RBM6P78332 1123 aaKnown RBP22.94■■□□□ 1.26
SEMA4B-215ENST00000560089 ICE2Q659A1 982 aa22.94■■□□□ 1.26
SEMA4B-215ENST00000560089 GGNBP2Q9H3C7 697 aa22.94■■□□□ 1.26
SEMA4B-215ENST00000560089 MED14O60244 1454 aa22.94■■□□□ 1.26
SEMA4B-215ENST00000560089 LMOD3Q0VAK6 560 aa22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 TRIM27P14373 513 aa22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 ANKRD45Q5TZF3 282 aa22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 KIF1BPQ96EK5 621 aa22.93■■□□□ 1.26
SEMA4B-215ENST00000560089 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
SEMA4B-215ENST00000560089 NCAPGQ9BPX3 1015 aa22.92■■□□□ 1.26
SEMA4B-215ENST00000560089 WDR63Q8IWG1 891 aa22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 C10orf67Q8IYJ2 551 aa22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 SETD1BQ9UPS6 1966 aaKnown RBP22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 GADD45BO75293 160 aaPredicted RBP22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 FBXO38Q6PIJ6 1188 aa22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 NUDT16Q96DE0 195 aaKnown RBP22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 SMC4Q9NTJ3 1288 aa22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 IFT57Q9NWB7 429 aa22.91■■□□□ 1.26
SEMA4B-215ENST00000560089 TECPR2O15040 1411 aa22.9■■□□□ 1.26
SEMA4B-215ENST00000560089 GYS2P54840 703 aa22.9■■□□□ 1.26
SEMA4B-215ENST00000560089 SYT10Q6XYQ8 523 aa22.9■■□□□ 1.26
SEMA4B-215ENST00000560089 CASQ1P31415 396 aa22.9■■□□□ 1.26
SEMA4B-215ENST00000560089 HSPA2P54652 639 aa22.9■■□□□ 1.26
SEMA4B-215ENST00000560089 PUS7Q96PZ0 661 aaKnown RBP22.9■■□□□ 1.26
SEMA4B-215ENST00000560089 CCDC183Q5T5S1 534 aa22.89■■□□□ 1.26
SEMA4B-215ENST00000560089 ZBTB40Q9NUA8 1239 aa22.89■■□□□ 1.26
SEMA4B-215ENST00000560089 TERF2IPQ9NYB0 399 aa22.89■■□□□ 1.26
SEMA4B-215ENST00000560089 PRR36Q9H6K5 1346 aa22.89■■□□□ 1.25
SEMA4B-215ENST00000560089 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
SEMA4B-215ENST00000560089 CD163L1Q9NR16 1453 aa22.89■■□□□ 1.25
SEMA4B-215ENST00000560089 FAM135BQ49AJ0 1406 aa22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 PTGS1P23219 599 aa22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.88■■□□□ 1.25
SEMA4B-215ENST00000560089 V9GYY5 206 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms