RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 RNMTO43148 476 aaKnown RBP11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 TEFQ10587 303 aa11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 AKT1S1Q96B36 256 aa11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 RGPD3A6NKT7 1758 aaPredicted RBP11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 RGPD4Q7Z3J3 1758 aa11.97□□□□□ -0.49
SEMA4B-214ENST00000560003 COL3A1P02461 1466 aaPredicted RBP11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 AK7Q96M32 723 aa11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 LGR6Q9HBX8 967 aa11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 SRCAPQ6ZRS2 3230 aa11.96□□□□□ -0.49
SEMA4B-214ENST00000560003 PKD1L3Q7Z443 1732 aa11.95□□□□□ -0.5
SEMA4B-214ENST00000560003 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
SEMA4B-214ENST00000560003 KAT6BQ8WYB5 2073 aa11.95□□□□□ -0.5
SEMA4B-214ENST00000560003 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
SEMA4B-214ENST00000560003 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
SEMA4B-214ENST00000560003 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
SEMA4B-214ENST00000560003 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
SEMA4B-214ENST00000560003 ANP32CO43423 234 aa11.94□□□□□ -0.5
SEMA4B-214ENST00000560003 KCNQ4P56696 695 aa11.94□□□□□ -0.5
SEMA4B-214ENST00000560003 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
SEMA4B-214ENST00000560003 TTC5Q8N0Z6 440 aa11.94□□□□□ -0.5
SEMA4B-214ENST00000560003 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-214ENST00000560003 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
SEMA4B-214ENST00000560003 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-214ENST00000560003 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
SEMA4B-214ENST00000560003 KDM6AO15550 1401 aaPredicted RBP11.93□□□□□ -0.5
SEMA4B-214ENST00000560003 RREB1Q92766 1687 aa11.92□□□□□ -0.5
SEMA4B-214ENST00000560003 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
SEMA4B-214ENST00000560003 POLD1P28340 1107 aa11.92□□□□□ -0.5
SEMA4B-214ENST00000560003 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
SEMA4B-214ENST00000560003 IL17REQ8NFR9 667 aa11.92□□□□□ -0.5
SEMA4B-214ENST00000560003 BTAF1O14981 1849 aa11.92□□□□□ -0.5
SEMA4B-214ENST00000560003 SSFA2P28290 1259 aa11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 LMOD3Q0VAK6 560 aa11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
SEMA4B-214ENST00000560003 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
SEMA4B-214ENST00000560003 STARD3NLO95772 234 aa11.9□□□□□ -0.5
SEMA4B-214ENST00000560003 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
SEMA4B-214ENST00000560003 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
SEMA4B-214ENST00000560003 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 GNPATO15228 680 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 ITPK1Q13572 414 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 LINC00116Q8NCU8 138 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
SEMA4B-214ENST00000560003 CNTNAP4Q9C0A0 1308 aa11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
SEMA4B-214ENST00000560003 RFC4P35249 363 aa11.87□□□□□ -0.51
SEMA4B-214ENST00000560003 RIPK4P57078 832 aa11.87□□□□□ -0.51
SEMA4B-214ENST00000560003 MCM10Q7L590 875 aa11.87□□□□□ -0.51
SEMA4B-214ENST00000560003 ARXQ96QS3 562 aa11.87□□□□□ -0.51
SEMA4B-214ENST00000560003 ADAMTS8Q9UP79 889 aa11.87□□□□□ -0.51
SEMA4B-214ENST00000560003 PHF14O94880 888 aa11.86□□□□□ -0.51
SEMA4B-214ENST00000560003 PTGER2P43116 358 aa11.86□□□□□ -0.51
SEMA4B-214ENST00000560003 NLGN1Q8N2Q7 840 aa11.86□□□□□ -0.51
SEMA4B-214ENST00000560003 SLC4A9Q96Q91 983 aa11.86□□□□□ -0.51
SEMA4B-214ENST00000560003 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
SEMA4B-214ENST00000560003 TMPOP42166 694 aaKnown RBP11.85□□□□□ -0.51
SEMA4B-214ENST00000560003 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
SEMA4B-214ENST00000560003 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
SEMA4B-214ENST00000560003 LY75O60449 1722 aa11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 A0A087WZG4 1122 aa11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 SNRPA1P09661 255 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 CYP19A1P11511 503 aaPredicted RBP11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
SEMA4B-214ENST00000560003 MRC1P22897 1456 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 ZPR1O75312 459 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 DCTN1Q14203 1278 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 INTS5Q6P9B9 1019 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 ITGB4P16144 1822 aa11.83□□□□□ -0.52
SEMA4B-214ENST00000560003 LRP5O75197 1615 aa11.82□□□□□ -0.52
SEMA4B-214ENST00000560003 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
SEMA4B-214ENST00000560003 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
SEMA4B-214ENST00000560003 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms