RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
LRRC28-216ENST00000559819 PDE1AP54750 535 aa12.39□□□□□ -0.43
LRRC28-216ENST00000559819 RABEP1Q15276 862 aa12.39□□□□□ -0.43
LRRC28-216ENST00000559819 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
LRRC28-216ENST00000559819 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-216ENST00000559819 GBP4Q96PP9 640 aa12.38□□□□□ -0.43
LRRC28-216ENST00000559819 PHAXQ9H814 394 aaKnown RBP12.38□□□□□ -0.43
LRRC28-216ENST00000559819 LRRFIP2Q9Y608 721 aaKnown RBP12.38□□□□□ -0.43
LRRC28-216ENST00000559819 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
LRRC28-216ENST00000559819 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
LRRC28-216ENST00000559819 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
LRRC28-216ENST00000559819 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
LRRC28-216ENST00000559819 NBPF6Q5VWK0 638 aa12.36□□□□□ -0.43
LRRC28-216ENST00000559819 NBPF4Q96M43 638 aa12.36□□□□□ -0.43
LRRC28-216ENST00000559819 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
LRRC28-216ENST00000559819 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
LRRC28-216ENST00000559819 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
LRRC28-216ENST00000559819 ERC2O15083 957 aa12.35□□□□□ -0.43
LRRC28-216ENST00000559819 GNAI3P08754 354 aa12.35□□□□□ -0.43
LRRC28-216ENST00000559819 EIF2S2P20042 333 aaKnown RBP12.35□□□□□ -0.43
LRRC28-216ENST00000559819 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
LRRC28-216ENST00000559819 KCNQ3O43525 872 aa12.35□□□□□ -0.43
LRRC28-216ENST00000559819 PKP1Q13835 747 aa12.34□□□□□ -0.43
LRRC28-216ENST00000559819 FAM43AQ8N2R8 423 aa12.34□□□□□ -0.43
LRRC28-216ENST00000559819 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
LRRC28-216ENST00000559819 USP44Q9H0E7 712 aa12.34□□□□□ -0.43
LRRC28-216ENST00000559819 ZGPATQ8N5A5 531 aaKnown RBP12.34□□□□□ -0.43
LRRC28-216ENST00000559819 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-216ENST00000559819 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-216ENST00000559819 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
LRRC28-216ENST00000559819 IBTKQ9P2D0 1353 aaPredicted RBP12.33□□□□□ -0.43
LRRC28-216ENST00000559819 REC8O95072 547 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 MX1P20591 662 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 ESCO1Q5FWF5 840 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 GAS2L3Q86XJ1 694 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 IP6K1Q92551 441 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 RILPL2Q969X0 211 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
LRRC28-216ENST00000559819 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
LRRC28-216ENST00000559819 ANXA1P04083 346 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
LRRC28-216ENST00000559819 UNC5CLQ8IV45 518 aa12.33□□□□□ -0.44
LRRC28-216ENST00000559819 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
LRRC28-216ENST00000559819 UBTFL1P0CB47 393 aaPredicted RBP12.32□□□□□ -0.44
LRRC28-216ENST00000559819 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
LRRC28-216ENST00000559819 PSME1Q06323 249 aa12.32□□□□□ -0.44
LRRC28-216ENST00000559819 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
LRRC28-216ENST00000559819 LTN1O94822 1766 aa12.32□□□□□ -0.44
LRRC28-216ENST00000559819 AK9Q5TCS8 1911 aa12.32□□□□□ -0.44
LRRC28-216ENST00000559819 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 ESYT1Q9BSJ8 1104 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 PALD1Q9ULE6 856 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 NFAT5O94916 1531 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 ST18O60284 1047 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 MRE11P49959 708 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
LRRC28-216ENST00000559819 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
LRRC28-216ENST00000559819 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 MPRIPQ6WCQ1 1025 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 BABAM1Q9NWV8 329 aa12.31□□□□□ -0.44
LRRC28-216ENST00000559819 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
LRRC28-216ENST00000559819 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
LRRC28-216ENST00000559819 CHMLP26374 656 aa12.3□□□□□ -0.44
LRRC28-216ENST00000559819 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
LRRC28-216ENST00000559819 ANKLE2Q86XL3 938 aa12.3□□□□□ -0.44
LRRC28-216ENST00000559819 CYP2E1P05181 493 aaPredicted RBP12.3□□□□□ -0.44
LRRC28-216ENST00000559819 ZNF530Q6P9A1 599 aaPredicted RBP12.3□□□□□ -0.44
LRRC28-216ENST00000559819 NOL8Q76FK4 1167 aaKnown RBP12.3□□□□□ -0.44
LRRC28-216ENST00000559819 SRCIN1Q9C0H9 1055 aa12.3□□□□□ -0.44
LRRC28-216ENST00000559819 IL25Q9H293 177 aa12.3□□□□□ -0.44
LRRC28-216ENST00000559819 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-216ENST00000559819 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-216ENST00000559819 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
LRRC28-216ENST00000559819 ANO2Q9NQ90 1003 aa12.29□□□□□ -0.44
LRRC28-216ENST00000559819 PXDNLA1KZ92 1463 aa12.29□□□□□ -0.44
LRRC28-216ENST00000559819 SOS1Q07889 1333 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-216ENST00000559819 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
LRRC28-216ENST00000559819 NEK4P51957 841 aa12.29□□□□□ -0.44
LRRC28-216ENST00000559819 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-216ENST00000559819 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
LRRC28-216ENST00000559819 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-216ENST00000559819 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 CLEC17AQ6ZS10 378 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 ZDHHC9Q9Y397 364 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 DDX49Q9Y6V7 483 aaKnown RBP12.28□□□□□ -0.44
LRRC28-216ENST00000559819 CHD2O14647 1828 aaKnown RBP12.28□□□□□ -0.44
LRRC28-216ENST00000559819 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 GOLGA6L22H0YM25 854 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 NUCB2P80303 420 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 PXDNQ92626 1479 aa12.28□□□□□ -0.44
LRRC28-216ENST00000559819 TUBGCP6Q96RT7 1819 aa12.27□□□□□ -0.44
LRRC28-216ENST00000559819 SRGAP3O43295 1099 aa12.27□□□□□ -0.44
LRRC28-216ENST00000559819 PTMSP20962 102 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms