RNA–Protein interactions for RNA: ENST00000559141.1

GTF2A2-209, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 5

Gene GTF2A2, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-209ENST00000559141 SLFN5Q08AF3 891 aa16.03■□□□□ 0.16
GTF2A2-209ENST00000559141 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
GTF2A2-209ENST00000559141 FAM196AQ6ZSG2 479 aa16.03■□□□□ 0.16
GTF2A2-209ENST00000559141 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
GTF2A2-209ENST00000559141 IFT57Q9NWB7 429 aa16.03■□□□□ 0.16
GTF2A2-209ENST00000559141 MRC1P22897 1456 aa16.03■□□□□ 0.16
GTF2A2-209ENST00000559141 CHL1O00533 1208 aa16.02■□□□□ 0.16
GTF2A2-209ENST00000559141 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.16
GTF2A2-209ENST00000559141 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.16
GTF2A2-209ENST00000559141 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
GTF2A2-209ENST00000559141 E9PSI1 815 aa16.01■□□□□ 0.15
GTF2A2-209ENST00000559141 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
GTF2A2-209ENST00000559141 ACSBG1Q96GR2 724 aa16.01■□□□□ 0.15
GTF2A2-209ENST00000559141 BTBD11A6QL63 1104 aa16■□□□□ 0.15
GTF2A2-209ENST00000559141 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
GTF2A2-209ENST00000559141 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
GTF2A2-209ENST00000559141 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
GTF2A2-209ENST00000559141 PIGBQ92521 554 aa15.99■□□□□ 0.15
GTF2A2-209ENST00000559141 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
GTF2A2-209ENST00000559141 KCNQ2O43526 872 aa15.98■□□□□ 0.15
GTF2A2-209ENST00000559141 SYTL4Q96C24 671 aaPredicted RBP15.98■□□□□ 0.15
GTF2A2-209ENST00000559141 MYH16Q9H6N6 1097 aa15.98■□□□□ 0.15
GTF2A2-209ENST00000559141 MBIPQ9NS73 344 aa15.98■□□□□ 0.15
GTF2A2-209ENST00000559141 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
GTF2A2-209ENST00000559141 DUSP27Q5VZP5 1158 aa15.97■□□□□ 0.15
GTF2A2-209ENST00000559141 PAPPAQ13219 1627 aa15.97■□□□□ 0.15
GTF2A2-209ENST00000559141 BTAF1O14981 1849 aa15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 KCNQ3O43525 872 aa15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 ZNF790Q6PG37 636 aa15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 ATG3Q9NT62 314 aa15.96■□□□□ 0.15
GTF2A2-209ENST00000559141 FANCIQ9NVI1 1328 aa15.95■□□□□ 0.14
GTF2A2-209ENST00000559141 UBR2Q8IWV8 1755 aa15.95■□□□□ 0.14
GTF2A2-209ENST00000559141 EIF4A1P60842 406 aaKnown RBP15.94■□□□□ 0.14
GTF2A2-209ENST00000559141 PTF1AQ7RTS3 328 aa15.94■□□□□ 0.14
GTF2A2-209ENST00000559141 ASAP1Q9ULH1 1129 aa15.94■□□□□ 0.14
GTF2A2-209ENST00000559141 TRIM37O94972 964 aa15.93■□□□□ 0.14
GTF2A2-209ENST00000559141 TTC5Q8N0Z6 440 aa15.93■□□□□ 0.14
GTF2A2-209ENST00000559141 EXOSC9Q06265 439 aaKnown RBP15.92■□□□□ 0.14
GTF2A2-209ENST00000559141 SMARCC1Q92922 1105 aaPredicted RBP15.92■□□□□ 0.14
GTF2A2-209ENST00000559141 HEG1Q9ULI3 1381 aa15.91■□□□□ 0.14
GTF2A2-209ENST00000559141 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
GTF2A2-209ENST00000559141 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
GTF2A2-209ENST00000559141 LY75O60449 1722 aa15.91■□□□□ 0.14
GTF2A2-209ENST00000559141 KCPQ6ZWJ8 1503 aa15.9■□□□□ 0.14
GTF2A2-209ENST00000559141 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
GTF2A2-209ENST00000559141 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
GTF2A2-209ENST00000559141 VSIG10Q8N0Z9 540 aa15.89■□□□□ 0.13
GTF2A2-209ENST00000559141 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
GTF2A2-209ENST00000559141 TNS1Q9HBL0 1735 aaKnown RBP15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 CACNA1FO60840 1977 aa15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 VAMP4O75379 141 aa15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 GIGYF1O75420 1035 aaPredicted RBP15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 TSPYL6Q8N831 410 aa15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
GTF2A2-209ENST00000559141 PALLDQ8WX93 1383 aa15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 PLSCR1O15162 318 aa15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 PTCD1O75127 700 aaKnown RBP15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 HOXB7P09629 217 aa15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 TWISTNBQ3B726 338 aaPredicted RBP15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
GTF2A2-209ENST00000559141 C5P01031 1676 aa15.86■□□□□ 0.13
GTF2A2-209ENST00000559141 SLC4A9Q96Q91 983 aa15.86■□□□□ 0.13
GTF2A2-209ENST00000559141 TEX13AQ9BXU3 409 aaPredicted RBP15.86■□□□□ 0.13
GTF2A2-209ENST00000559141 LOC102724428A0A0B4J2F2 783 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 PRAMEF22A3QJZ6 481 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 APBA3O96018 575 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 SIK1P57059 783 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 CCDC125Q86Z20 511 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 CICQ96RK0 1608 aaPredicted RBP15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 TJP1Q07157 1748 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 LAMB4A4D0S4 1761 aa15.85■□□□□ 0.13
GTF2A2-209ENST00000559141 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
GTF2A2-209ENST00000559141 ATP6V1AP38606 617 aa15.84■□□□□ 0.13
GTF2A2-209ENST00000559141 ZNF428Q96B54 188 aa15.84■□□□□ 0.13
GTF2A2-209ENST00000559141 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
GTF2A2-209ENST00000559141 RGPD3A6NKT7 1758 aaPredicted RBP15.83■□□□□ 0.12
GTF2A2-209ENST00000559141 RGPD4Q7Z3J3 1758 aa15.83■□□□□ 0.12
GTF2A2-209ENST00000559141 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.12
GTF2A2-209ENST00000559141 DNAJC10Q8IXB1 793 aa15.82■□□□□ 0.12
GTF2A2-209ENST00000559141 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
GTF2A2-209ENST00000559141 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
GTF2A2-209ENST00000559141 SF3B2Q13435 895 aaKnown RBP15.81■□□□□ 0.12
GTF2A2-209ENST00000559141 ITPK1Q13572 414 aa15.81■□□□□ 0.12
GTF2A2-209ENST00000559141 ALDH1L2Q3SY69 923 aa15.81■□□□□ 0.12
GTF2A2-209ENST00000559141 PROM2Q8N271 834 aa15.81■□□□□ 0.12
GTF2A2-209ENST00000559141 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 CENPBP07199 599 aaPredicted RBP15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 TXNRD1Q16881 649 aa15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 SLC27A3Q5K4L6 730 aa15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 CCDC30Q5VVM6 783 aa15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 ILDR2Q71H61 639 aa15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 CCNL1Q9UK58 526 aaPredicted RBP15.8■□□□□ 0.12
GTF2A2-209ENST00000559141 STARD3NLO95772 234 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms