RNA–Protein interactions for RNA: ENST00000559069.1

LRRC49-214, Transcript of leucine rich repeat containing 49, human

TSL 4

Gene LRRC49, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-214	ENST00000559069	ZNF358	Q9NW07	568 aa		6.7	□□□□□ -1.34
LRRC49-214	ENST00000559069	EMILIN1	Q9Y6C2	1016 aa		6.7	□□□□□ -1.34
LRRC49-214	ENST00000559069	WASF2	Q9Y6W5	498 aa		6.7	□□□□□ -1.34
LRRC49-214	ENST00000559069	FAM181B	A6NEQ2	426 aa		6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	SWI5	Q1ZZU3	235 aa		6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	TSEN2	Q8NCE0	465 aa	Known RBP	6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	SLC16A10	Q8TF71	515 aa		6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	KLF16	Q9BXK1	252 aa	Predicted RBP	6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	ETNK1	Q9HBU6	452 aa		6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	PGPEP1	Q9NXJ5	209 aa		6.69	□□□□□ -1.34
LRRC49-214	ENST00000559069	ATP2B4	P23634	1241 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	SSFA2	P28290	1259 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	GDF10	P55107	478 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	KCNA1	Q09470	495 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	CBLB	Q13191	982 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	ITPKC	Q96DU7	683 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	ESF1	Q9H501	851 aa	Known RBP	6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	ZFAND3	Q9H8U3	227 aa		6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	RBM19	Q9Y4C8	960 aa	Known RBP	6.68	□□□□□ -1.34
LRRC49-214	ENST00000559069	PRMT3	O60678	531 aa		6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	CENPB	P07199	599 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	SCNN1A	P37088	669 aa		6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	OCLN	Q16625	522 aa		6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	CYP2U1	Q7Z449	544 aa		6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	NPM2	Q86SE8	214 aa	Known RBP	6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	KDF1	Q8NAX2	398 aa	Predicted RBP	6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	PRIMPOL	Q96LW4	560 aa		6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069	RAB6B	Q9NRW1	208 aa		6.67	□□□□□ -1.34
LRRC49-214	ENST00000559069		M0R2N6	131 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	WASL	O00401	505 aa	Predicted RBP	6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	ZIC2	O95409	532 aa	Predicted RBP	6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	ADH1A	P07327	375 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	TIMP2	P16035	220 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	WDR4	P57081	412 aa	Known RBP	6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	B4GALNT3	Q6L9W6	998 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	GAS2L2	Q8NHY3	880 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	ARHGEF10L	Q9HCE6	1279 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	SERTAD1	Q9UHV2	236 aa		6.66	□□□□□ -1.34
LRRC49-214	ENST00000559069	GNRH1	P01148	92 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	IL2RA	P01589	272 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	INHA	P05111	366 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	EPHA4	P54764	986 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069		Q6ZVU0	165 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	TNS4	Q8IZW8	715 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	UBE2Q2	Q8WVN8	375 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	AGBL1	Q96MI9	1066 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	HINFP	Q9BQA5	517 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	GZF1	Q9H116	711 aa	Predicted RBP	6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	IVNS1ABP	Q9Y6Y0	642 aa		6.65	□□□□□ -1.34
LRRC49-214	ENST00000559069	TXNDC2	Q86VQ3	553 aa		6.64	□□□□□ -1.35
LRRC49-214	ENST00000559069	TRIM52	Q96A61	297 aa		6.64	□□□□□ -1.35
LRRC49-214	ENST00000559069	PURB	Q96QR8	312 aa	Known RBP	6.64	□□□□□ -1.35
LRRC49-214	ENST00000559069	NXF1	Q9UBU9	619 aa	Known RBP	6.64	□□□□□ -1.35
LRRC49-214	ENST00000559069	CAPN5	O15484	640 aa	Predicted RBP	6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	WEE1	P30291	646 aa		6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	PTGIR	P43119	386 aa		6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	NPAS3	Q8IXF0	933 aa		6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	IRF7	Q92985	503 aa		6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	XAGE2	Q96GT9	111 aa		6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	SLC4A9	Q96Q91	983 aa		6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069	GNE	Q9Y223	722 aa	Known RBP	6.63	□□□□□ -1.35
LRRC49-214	ENST00000559069		A0A1W2PRU2	124 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	PATL2	C9JE40	543 aa	Known RBP	6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	BACH1	O14867	736 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	NEFL	P07196	543 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	RELB	Q01201	579 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	FKBP5	Q13451	457 aa	Predicted RBP	6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	ESCO1	Q5FWF5	840 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	TAS1R3	Q7RTX0	852 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	MEIOB	Q8N635	442 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	C1orf216	Q8TAB5	229 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	HRH3	Q9Y5N1	445 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	USP3	Q9Y6I4	520 aa		6.62	□□□□□ -1.35
LRRC49-214	ENST00000559069	C21orf2	O43822	256 aa		6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	FOXK2	Q01167	660 aa		6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	MTFR1	Q15390	333 aa		6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	TBCEL	Q5QJ74	424 aa		6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	LCE2C	Q5TA81	110 aa		6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	CNKSR1	Q969H4	720 aa		6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.61	□□□□□ -1.35
LRRC49-214	ENST00000559069		A6NJY4	79 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	BMP1	P13497	986 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	IGFBP4	P22692	258 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	SERPINB4	P48594	390 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	SMTN	P53814	917 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	CLN3	Q13286	438 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	CAPN12	Q6ZSI9	719 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	SLC9A9	Q8IVB4	645 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	SCG3	Q8WXD2	468 aa	Known RBP	6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	ESYT1	Q9BSJ8	1104 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	MKNK1	Q9BUB5	465 aa		6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	SCHIP1	Q9P0W5	487 aa	Predicted RBP	6.6	□□□□□ -1.35
LRRC49-214	ENST00000559069	ATAD2	Q6PL18	1390 aa		6.59	□□□□□ -1.35
LRRC49-214	ENST00000559069	MEN1	O00255	615 aa		6.59	□□□□□ -1.35
LRRC49-214	ENST00000559069	ARID4A	P29374	1257 aa	Predicted RBP	6.59	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms