RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
GABPB1-208ENST00000558970 BAG6P46379 1132 aa16.31■□□□□ 0.2
GABPB1-208ENST00000558970 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
GABPB1-208ENST00000558970 PIGBQ92521 554 aa16.31■□□□□ 0.2
GABPB1-208ENST00000558970 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
GABPB1-208ENST00000558970 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
GABPB1-208ENST00000558970 LY75O60449 1722 aa16.31■□□□□ 0.2
GABPB1-208ENST00000558970 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
GABPB1-208ENST00000558970 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
GABPB1-208ENST00000558970 APBA3O96018 575 aa16.3■□□□□ 0.2
GABPB1-208ENST00000558970 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
GABPB1-208ENST00000558970 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
GABPB1-208ENST00000558970 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
GABPB1-208ENST00000558970 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
GABPB1-208ENST00000558970 UBR2Q8IWV8 1755 aa16.29■□□□□ 0.2
GABPB1-208ENST00000558970 HTATSF1O43719 755 aaKnown RBP16.29■□□□□ 0.2
GABPB1-208ENST00000558970 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
GABPB1-208ENST00000558970 ASAP1Q9ULH1 1129 aa16.28■□□□□ 0.2
GABPB1-208ENST00000558970 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
GABPB1-208ENST00000558970 C5P01031 1676 aa16.27■□□□□ 0.19
GABPB1-208ENST00000558970 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
GABPB1-208ENST00000558970 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
GABPB1-208ENST00000558970 KCNQ4P56696 695 aa16.26■□□□□ 0.19
GABPB1-208ENST00000558970 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
GABPB1-208ENST00000558970 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
GABPB1-208ENST00000558970 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
GABPB1-208ENST00000558970 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
GABPB1-208ENST00000558970 RREB1Q92766 1687 aa16.25■□□□□ 0.19
GABPB1-208ENST00000558970 KCNQ3O43525 872 aa16.25■□□□□ 0.19
GABPB1-208ENST00000558970 PTCD1O75127 700 aaKnown RBP16.25■□□□□ 0.19
GABPB1-208ENST00000558970 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
GABPB1-208ENST00000558970 ATG3Q9NT62 314 aa16.25■□□□□ 0.19
GABPB1-208ENST00000558970 LRP5O75197 1615 aa16.25■□□□□ 0.19
GABPB1-208ENST00000558970 TJP1Q07157 1748 aa16.25■□□□□ 0.19
GABPB1-208ENST00000558970 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
GABPB1-208ENST00000558970 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-208ENST00000558970 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
GABPB1-208ENST00000558970 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
GABPB1-208ENST00000558970 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
GABPB1-208ENST00000558970 EZH2Q15910 746 aaKnown RBP16.23■□□□□ 0.19
GABPB1-208ENST00000558970 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
GABPB1-208ENST00000558970 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-208ENST00000558970 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.19
GABPB1-208ENST00000558970 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
GABPB1-208ENST00000558970 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.19
GABPB1-208ENST00000558970 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.19
GABPB1-208ENST00000558970 PSDA5PKW4 1024 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-208ENST00000558970 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
GABPB1-208ENST00000558970 CCNL1Q9UK58 526 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-208ENST00000558970 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
GABPB1-208ENST00000558970 GNAI1P63096 354 aa16.19■□□□□ 0.18
GABPB1-208ENST00000558970 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
GABPB1-208ENST00000558970 ZNF496Q96IT1 587 aaPredicted RBP16.19■□□□□ 0.18
GABPB1-208ENST00000558970 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
GABPB1-208ENST00000558970 MBIPQ9NS73 344 aa16.19■□□□□ 0.18
GABPB1-208ENST00000558970 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
GABPB1-208ENST00000558970 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 PLSCR1O15162 318 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 SIK1P57059 783 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 CAMKK2Q96RR4 588 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 C4BP0C0L5 1744 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 ZNF831Q5JPB2 1677 aa16.18■□□□□ 0.18
GABPB1-208ENST00000558970 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 PROM2Q8N271 834 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 NGEFQ8N5V2 710 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 FMNL2Q96PY5 1086 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 SLC4A9Q96Q91 983 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 LRRC4BQ9NT99 713 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
GABPB1-208ENST00000558970 CHL1O00533 1208 aa16.16■□□□□ 0.18
GABPB1-208ENST00000558970 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
GABPB1-208ENST00000558970 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
GABPB1-208ENST00000558970 CICQ96RK0 1608 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-208ENST00000558970 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
GABPB1-208ENST00000558970 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
GABPB1-208ENST00000558970 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
GABPB1-208ENST00000558970 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
GABPB1-208ENST00000558970 ITPK1Q13572 414 aa16.15■□□□□ 0.18
GABPB1-208ENST00000558970 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
GABPB1-208ENST00000558970 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
GABPB1-208ENST00000558970 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
GABPB1-208ENST00000558970 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
GABPB1-208ENST00000558970 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
GABPB1-208ENST00000558970 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
GABPB1-208ENST00000558970 IL16Q14005 1332 aa16.14■□□□□ 0.17
GABPB1-208ENST00000558970 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.17
GABPB1-208ENST00000558970 UBR3Q6ZT12 1888 aa16.13■□□□□ 0.17
GABPB1-208ENST00000558970 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
GABPB1-208ENST00000558970 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
GABPB1-208ENST00000558970 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
GABPB1-208ENST00000558970 EXOSC9Q06265 439 aaKnown RBP16.11■□□□□ 0.17
GABPB1-208ENST00000558970 SLC27A3Q5K4L6 730 aa16.11■□□□□ 0.17
GABPB1-208ENST00000558970 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
GABPB1-208ENST00000558970 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
GABPB1-208ENST00000558970 E9PSI1 815 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms