RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 FLT4P35916 1363 aa10.97□□□□□ -0.65
EXD1-204ENST00000558881 ZKSCAN2Q63HK3 967 aa10.96□□□□□ -0.65
EXD1-204ENST00000558881 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
EXD1-204ENST00000558881 NOB1Q9ULX3 412 aaKnown RBP10.96□□□□□ -0.65
EXD1-204ENST00000558881 FOXO3O43524 673 aa10.96□□□□□ -0.66
EXD1-204ENST00000558881 HOXC9P31274 260 aa10.96□□□□□ -0.66
EXD1-204ENST00000558881 GNAI1P63096 354 aa10.96□□□□□ -0.66
EXD1-204ENST00000558881 XPCQ01831 940 aaPredicted RBP10.96□□□□□ -0.66
EXD1-204ENST00000558881 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.66
EXD1-204ENST00000558881 MTERF4Q7Z6M4 381 aaKnown RBP10.96□□□□□ -0.66
EXD1-204ENST00000558881 ZSCAN30Q86W11 494 aa10.96□□□□□ -0.66
EXD1-204ENST00000558881 PPP1R9BQ96SB3 815 aa10.96□□□□□ -0.66
EXD1-204ENST00000558881 ELL2O00472 640 aaPredicted RBP10.95□□□□□ -0.66
EXD1-204ENST00000558881 VAMP4O75379 141 aa10.95□□□□□ -0.66
EXD1-204ENST00000558881 LMOD3Q0VAK6 560 aa10.95□□□□□ -0.66
EXD1-204ENST00000558881 MCM10Q7L590 875 aa10.95□□□□□ -0.66
EXD1-204ENST00000558881 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
EXD1-204ENST00000558881 DZIP1LQ8IYY4 767 aaKnown RBP10.95□□□□□ -0.66
EXD1-204ENST00000558881 TRIM27P14373 513 aa10.95□□□□□ -0.66
EXD1-204ENST00000558881 HSPA2P54652 639 aa10.95□□□□□ -0.66
EXD1-204ENST00000558881 CADPS2Q86UW7 1296 aa10.95□□□□□ -0.66
EXD1-204ENST00000558881 LTV1Q96GA3 475 aaPredicted RBP10.95□□□□□ -0.66
EXD1-204ENST00000558881 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
EXD1-204ENST00000558881 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
EXD1-204ENST00000558881 PCDHB15Q9Y5E8 787 aa10.94□□□□□ -0.66
EXD1-204ENST00000558881 C8orf58Q8NAV2 365 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 WDR70Q9NW82 654 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 ARHGEF10O15013 1369 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 MVPQ14764 893 aaKnown RBP10.93□□□□□ -0.66
EXD1-204ENST00000558881 ALDH1L2Q3SY69 923 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 GAS2L3Q86XJ1 694 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
EXD1-204ENST00000558881 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
EXD1-204ENST00000558881 UTP14CQ5TAP6 766 aaKnown RBP10.92□□□□□ -0.66
EXD1-204ENST00000558881 C19orf44Q9H6X5 657 aa10.92□□□□□ -0.66
EXD1-204ENST00000558881 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
EXD1-204ENST00000558881 ZBTB7CA1YPR0 619 aa10.92□□□□□ -0.66
EXD1-204ENST00000558881 DDIT3P35638 169 aa10.92□□□□□ -0.66
EXD1-204ENST00000558881 SKOR2Q2VWA4 1001 aaPredicted RBP10.92□□□□□ -0.66
EXD1-204ENST00000558881 MARF1Q9Y4F3 1742 aaKnown RBP10.92□□□□□ -0.66
EXD1-204ENST00000558881 PTMSP20962 102 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
EXD1-204ENST00000558881 TWISTNBQ3B726 338 aaPredicted RBP10.91□□□□□ -0.66
EXD1-204ENST00000558881 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
EXD1-204ENST00000558881 NWD1Q149M9 1564 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 KDRP35968 1356 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 KRT24Q2M2I5 525 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 HS1BP3Q53T59 392 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 TMEM57Q8N5G2 664 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 USHBP1Q8N6Y0 703 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 KCNV2Q8TDN2 545 aa10.91□□□□□ -0.66
EXD1-204ENST00000558881 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.66
EXD1-204ENST00000558881 CHL1O00533 1208 aa10.9□□□□□ -0.66
EXD1-204ENST00000558881 MSNP26038 577 aaKnown RBP10.9□□□□□ -0.66
EXD1-204ENST00000558881 KRT28Q7Z3Y7 464 aa10.9□□□□□ -0.66
EXD1-204ENST00000558881 IP6K1Q92551 441 aa10.9□□□□□ -0.66
EXD1-204ENST00000558881 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
EXD1-204ENST00000558881 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
EXD1-204ENST00000558881 C1orf167Q5SNV9 1468 aa10.9□□□□□ -0.67
EXD1-204ENST00000558881 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
EXD1-204ENST00000558881 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
EXD1-204ENST00000558881 ITPRIPQ8IWB1 547 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 ZNF428Q96B54 188 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 KIF16BQ96L93 1317 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 TMEM94Q12767 1356 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 DLG5Q8TDM6 1919 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 KDM4FA0A1W2PPD8 638 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 GCP02774 474 aa10.89□□□□□ -0.67
EXD1-204ENST00000558881 DDX17Q92841 729 aaKnown RBP10.89□□□□□ -0.67
EXD1-204ENST00000558881 DYNC1I1O14576 645 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 ZNF500O60304 480 aaPredicted RBP10.88□□□□□ -0.67
EXD1-204ENST00000558881 KCNH5Q8NCM2 988 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
EXD1-204ENST00000558881 CRB1P82279 1406 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 PDE4CQ08493 712 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 DMTNQ08495 405 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 NBPF6Q5VWK0 638 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 NBPF4Q96M43 638 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 GBP4Q96PP9 640 aa10.88□□□□□ -0.67
EXD1-204ENST00000558881 USP54Q70EL1 1684 aa10.87□□□□□ -0.67
EXD1-204ENST00000558881 ATF3P18847 181 aa10.87□□□□□ -0.67
EXD1-204ENST00000558881 NASPP49321 788 aaPredicted RBP10.87□□□□□ -0.67
EXD1-204ENST00000558881 GAS2L2Q8NHY3 880 aa10.87□□□□□ -0.67
EXD1-204ENST00000558881 RTF1Q92541 710 aaKnown RBP10.87□□□□□ -0.67
EXD1-204ENST00000558881 C22orf23Q9BZE7 217 aa10.87□□□□□ -0.67
EXD1-204ENST00000558881 NFAT5O94916 1531 aa10.87□□□□□ -0.67
EXD1-204ENST00000558881 NCLP19338 710 aaKnown RBP10.87□□□□□ -0.67
EXD1-204ENST00000558881 ANP32BQ92688 251 aaKnown RBP10.87□□□□□ -0.67
EXD1-204ENST00000558881 DDX19BQ9UMR2 479 aa10.87□□□□□ -0.67
EXD1-204ENST00000558881 RTL1A6NKG5 1358 aa10.86□□□□□ -0.67
EXD1-204ENST00000558881 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
EXD1-204ENST00000558881 HSCBQ8IWL3 235 aa10.86□□□□□ -0.67
EXD1-204ENST00000558881 TNPO1Q92973 898 aaKnown RBP10.86□□□□□ -0.67
EXD1-204ENST00000558881 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
EXD1-204ENST00000558881 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms