RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 COL14A1Q05707 1796 aaKnown RBP5.48□□□□□ -1.53
ZEB1-212ENST00000558655 WNK3Q9BYP7 1800 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 TICAM2Q86XR7 235 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 ORAI2Q96SN7 254 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 COL3A1P02461 1466 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-212ENST00000558655 PSME1Q06323 249 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 RALBP1Q15311 655 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 CHADLQ6NUI6 762 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 RGPD5Q99666 1765 aa5.47□□□□□ -1.53
ZEB1-212ENST00000558655 SPATA31A3Q5VYP0 1347 aa5.46□□□□□ -1.53
ZEB1-212ENST00000558655 HMGB2P26583 209 aaKnown RBP5.46□□□□□ -1.53
ZEB1-212ENST00000558655 ESCO1Q5FWF5 840 aa5.46□□□□□ -1.53
ZEB1-212ENST00000558655 FHDC1Q9C0D6 1143 aaPredicted RBP5.46□□□□□ -1.53
ZEB1-212ENST00000558655 BCL9O00512 1426 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 FYB1O15117 783 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 CHRDL2Q6WN34 429 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 TMC1Q8TDI8 760 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 KNSTRNQ9Y448 316 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 RTL1A6NKG5 1358 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 CPDO75976 1380 aa5.46□□□□□ -1.54
ZEB1-212ENST00000558655 PLSCR1O15162 318 aa5.45□□□□□ -1.54
ZEB1-212ENST00000558655 KRT28Q7Z3Y7 464 aa5.45□□□□□ -1.54
ZEB1-212ENST00000558655 NGDNQ8NEJ9 315 aaKnown RBP5.45□□□□□ -1.54
ZEB1-212ENST00000558655 RGL2O15211 777 aa5.45□□□□□ -1.54
ZEB1-212ENST00000558655 EZH2Q15910 746 aaKnown RBP5.45□□□□□ -1.54
ZEB1-212ENST00000558655 HABP4Q5JVS0 413 aaKnown RBP5.45□□□□□ -1.54
ZEB1-212ENST00000558655 AEBP1Q8IUX7 1158 aa5.45□□□□□ -1.54
ZEB1-212ENST00000558655 PRKRIP1Q9H875 184 aaPredicted RBP5.45□□□□□ -1.54
ZEB1-212ENST00000558655 NCAPD2Q15021 1401 aa5.45□□□□□ -1.54
ZEB1-212ENST00000558655 CCER2I3L3R5 266 aa5.44□□□□□ -1.54
ZEB1-212ENST00000558655 NBPF15Q8N660 670 aa5.44□□□□□ -1.54
ZEB1-212ENST00000558655 ANO8Q9HCE9 1232 aaPredicted RBP5.44□□□□□ -1.54
ZEB1-212ENST00000558655 MEGF6O75095 1541 aa5.44□□□□□ -1.54
ZEB1-212ENST00000558655 PMFBP1Q8TBY8 1022 aa5.44□□□□□ -1.54
ZEB1-212ENST00000558655 MYBBP1AQ9BQG0 1328 aaKnown RBP5.44□□□□□ -1.54
ZEB1-212ENST00000558655 PPM1GO15355 546 aaPredicted RBP5.44□□□□□ -1.54
ZEB1-212ENST00000558655 MFAP1P55081 439 aaKnown RBP5.44□□□□□ -1.54
ZEB1-212ENST00000558655 LMOD2Q6P5Q4 547 aa5.44□□□□□ -1.54
ZEB1-212ENST00000558655 RGPD2P0DJD1 1756 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 FOXO3O43524 673 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 NME9Q86XW9 330 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 SUPT16HQ9Y5B9 1047 aaKnown RBP5.43□□□□□ -1.54
ZEB1-212ENST00000558655 NUTM2FA1L443 756 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 ECM2O94769 699 aaPredicted RBP5.43□□□□□ -1.54
ZEB1-212ENST00000558655 NLRP13Q86W25 1043 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 PSMD1Q99460 953 aa5.43□□□□□ -1.54
ZEB1-212ENST00000558655 KCNH5Q8NCM2 988 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 COG3Q96JB2 828 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 NAP1L5Q96NT1 182 aaPredicted RBP5.42□□□□□ -1.54
ZEB1-212ENST00000558655 PKD1L3Q7Z443 1732 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 ANP32CO43423 234 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 PPP2R1AP30153 589 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 FOXK2Q01167 660 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 CCDC82Q8N4S0 544 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 SPDYE1Q8NFV5 336 aaPredicted RBP5.42□□□□□ -1.54
ZEB1-212ENST00000558655 PRDM6Q9NQX0 595 aa5.42□□□□□ -1.54
ZEB1-212ENST00000558655 PARP4Q9UKK3 1724 aaKnown RBP5.42□□□□□ -1.54
ZEB1-212ENST00000558655 ZC3H4Q9UPT8 1303 aaKnown RBP5.42□□□□□ -1.54
ZEB1-212ENST00000558655 RGS20O76081 388 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 CLSTN1O94985 981 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 TMCO4Q5TGY1 634 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 MORC1Q86VD1 984 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 SLC17A8Q8NDX2 589 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 SPOCK2Q92563 424 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 PRDM16Q9HAZ2 1276 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 AAMPQ13685 434 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 ABTB2Q8N961 1025 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 ZNF526Q8TF50 670 aaPredicted RBP5.41□□□□□ -1.54
ZEB1-212ENST00000558655 FLT4P35916 1363 aa5.41□□□□□ -1.54
ZEB1-212ENST00000558655 PRR29P0C7W0 189 aa5.4□□□□□ -1.54
ZEB1-212ENST00000558655 ARHGEF25Q86VW2 580 aa5.4□□□□□ -1.54
ZEB1-212ENST00000558655 PIP4P2Q8N4L2 257 aa5.4□□□□□ -1.54
ZEB1-212ENST00000558655 GGNBP2Q9H3C7 697 aa5.4□□□□□ -1.54
ZEB1-212ENST00000558655 PAPPAQ13219 1627 aa5.4□□□□□ -1.54
ZEB1-212ENST00000558655 NLRP6P59044 892 aa5.4□□□□□ -1.55
ZEB1-212ENST00000558655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.4□□□□□ -1.553e-6■■■■□ 22.7
ZEB1-212ENST00000558655 C16orf71Q8IYS4 520 aaPredicted RBP5.4□□□□□ -1.55
ZEB1-212ENST00000558655 SP7Q8TDD2 431 aaPredicted RBP5.4□□□□□ -1.55
ZEB1-212ENST00000558655 SLC24A3Q9HC58 644 aa5.4□□□□□ -1.55
ZEB1-212ENST00000558655 POLKQ9UBT6 870 aa5.4□□□□□ -1.55
ZEB1-212ENST00000558655 DLG5Q8TDM6 1919 aa5.4□□□□□ -1.55
ZEB1-212ENST00000558655 DDX17Q92841 729 aaKnown RBP5.39□□□□□ -1.55
ZEB1-212ENST00000558655 FAM122AQ96E09 287 aa5.39□□□□□ -1.55
ZEB1-212ENST00000558655 E9PSI1 815 aa5.39□□□□□ -1.55
ZEB1-212ENST00000558655 GCP02774 474 aa5.39□□□□□ -1.55
ZEB1-212ENST00000558655 COL5A2P05997 1499 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-212ENST00000558655 MAP3K19Q56UN5 1328 aa5.39□□□□□ -1.55
ZEB1-212ENST00000558655 CC2D1BQ5T0F9 858 aaKnown RBP5.39□□□□□ -1.55
ZEB1-212ENST00000558655 IP6K1Q92551 441 aa5.39□□□□□ -1.55
ZEB1-212ENST00000558655 KDRP35968 1356 aa5.39□□□□□ -1.55
ZEB1-212ENST00000558655 CCDC184Q52MB2 194 aa5.38□□□□□ -1.55
ZEB1-212ENST00000558655 GZF1Q9H116 711 aaPredicted RBP5.38□□□□□ -1.55
ZEB1-212ENST00000558655 LRRC37A3O60309 1634 aa5.38□□□□□ -1.55
ZEB1-212ENST00000558655 CA12O43570 354 aa5.38□□□□□ -1.55
ZEB1-212ENST00000558655 XPCQ01831 940 aaPredicted RBP5.38□□□□□ -1.55
ZEB1-212ENST00000558655 CC2D2BQ6DHV5 1058 aa5.38□□□□□ -1.55
ZEB1-212ENST00000558655 CREBZFQ9NS37 354 aa5.38□□□□□ -1.55
ZEB1-212ENST00000558655 SIPA1L3O60292 1781 aaPredicted RBP5.38□□□□□ -1.55
ZEB1-212ENST00000558655 PAK3O75914 559 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms