RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MCM10Q7L590 875 aa23.01■■□□□ 1.27
TPM1-214ENST00000558544 PIGBQ92521 554 aa23.01■■□□□ 1.27
TPM1-214ENST00000558544 CEMIPQ8WUJ3 1361 aa23■■□□□ 1.27
TPM1-214ENST00000558544 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
TPM1-214ENST00000558544 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
TPM1-214ENST00000558544 HTATSF1O43719 755 aaKnown RBP22.99■■□□□ 1.27
TPM1-214ENST00000558544 EN1Q05925 392 aaPredicted RBP22.99■■□□□ 1.27
TPM1-214ENST00000558544 NFATC2IPQ8NCF5 419 aa22.99■■□□□ 1.27
TPM1-214ENST00000558544 NUP188Q5SRE5 1749 aa22.98■■□□□ 1.27
TPM1-214ENST00000558544 TEFQ10587 303 aa22.97■■□□□ 1.27
TPM1-214ENST00000558544 UBR2Q8IWV8 1755 aa22.96■■□□□ 1.27
TPM1-214ENST00000558544 THUMPD2Q9BTF0 503 aaKnown RBP22.96■■□□□ 1.27
TPM1-214ENST00000558544 PLSCR1O15162 318 aa22.95■■□□□ 1.26
TPM1-214ENST00000558544 LMOD3Q0VAK6 560 aa22.95■■□□□ 1.26
TPM1-214ENST00000558544 EZH2Q15910 746 aaKnown RBP22.95■■□□□ 1.26
TPM1-214ENST00000558544 KDM3BQ7LBC6 1761 aa22.95■■□□□ 1.26
TPM1-214ENST00000558544 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
TPM1-214ENST00000558544 ASAP1Q9ULH1 1129 aa22.94■■□□□ 1.26
TPM1-214ENST00000558544 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
TPM1-214ENST00000558544 PALLDQ8WX93 1383 aa22.94■■□□□ 1.26
TPM1-214ENST00000558544 TAF1LQ8IZX4 1826 aa22.94■■□□□ 1.26
TPM1-214ENST00000558544 ATG3Q9NT62 314 aa22.92■■□□□ 1.26
TPM1-214ENST00000558544 C5P01031 1676 aa22.92■■□□□ 1.26
TPM1-214ENST00000558544 SMARCC1Q92922 1105 aaPredicted RBP22.91■■□□□ 1.26
TPM1-214ENST00000558544 SLC39A6Q13433 755 aa22.89■■□□□ 1.26
TPM1-214ENST00000558544 TXNRD1Q16881 649 aa22.89■■□□□ 1.26
TPM1-214ENST00000558544 KCPQ6ZWJ8 1503 aa22.89■■□□□ 1.26
TPM1-214ENST00000558544 TJP1Q07157 1748 aa22.89■■□□□ 1.26
TPM1-214ENST00000558544 ZNF831Q5JPB2 1677 aa22.89■■□□□ 1.25
TPM1-214ENST00000558544 BTBD11A6QL63 1104 aa22.89■■□□□ 1.25
TPM1-214ENST00000558544 PROM2Q8N271 834 aa22.89■■□□□ 1.25
TPM1-214ENST00000558544 SALL2Q9Y467 1007 aaPredicted RBP22.89■■□□□ 1.25
TPM1-214ENST00000558544 COL5A3P25940 1745 aaPredicted RBP22.87■■□□□ 1.25
TPM1-214ENST00000558544 CICQ96RK0 1608 aaPredicted RBP22.87■■□□□ 1.25
TPM1-214ENST00000558544 TAF7Q15545 349 aaPredicted RBP22.87■■□□□ 1.25
TPM1-214ENST00000558544 KCNQ4P56696 695 aa22.86■■□□□ 1.25
TPM1-214ENST00000558544 RBM42Q9BTD8 480 aaKnown RBP22.86■■□□□ 1.25
TPM1-214ENST00000558544 CCNL1Q9UK58 526 aaPredicted RBP22.86■■□□□ 1.25
TPM1-214ENST00000558544 LOC102724428A0A0B4J2F2 783 aa22.85■■□□□ 1.25
TPM1-214ENST00000558544 PTCD1O75127 700 aaKnown RBP22.85■■□□□ 1.25
TPM1-214ENST00000558544 SIK1P57059 783 aa22.85■■□□□ 1.25
TPM1-214ENST00000558544 TTC5Q8N0Z6 440 aa22.85■■□□□ 1.25
TPM1-214ENST00000558544 LRRC4BQ9NT99 713 aa22.85■■□□□ 1.25
TPM1-214ENST00000558544 MIS18AQ9NYP9 233 aa22.85■■□□□ 1.25
TPM1-214ENST00000558544 CCDC27Q2M243 656 aa22.84■■□□□ 1.25
TPM1-214ENST00000558544 SLC27A3Q5K4L6 730 aa22.84■■□□□ 1.25
TPM1-214ENST00000558544 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
TPM1-214ENST00000558544 C4BP0C0L5 1744 aa22.83■■□□□ 1.25
TPM1-214ENST00000558544 KCNQ3O43525 872 aa22.83■■□□□ 1.25
TPM1-214ENST00000558544 TUBGCP6Q96RT7 1819 aa22.83■■□□□ 1.25
TPM1-214ENST00000558544 NCBP3Q53F19 620 aaKnown RBP22.82■■□□□ 1.24
TPM1-214ENST00000558544 WWC1Q8IX03 1113 aa22.82■■□□□ 1.24
TPM1-214ENST00000558544 SLC4A9Q96Q91 983 aa22.82■■□□□ 1.24
TPM1-214ENST00000558544 ATP6V1AP38606 617 aa22.81■■□□□ 1.24
TPM1-214ENST00000558544 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
TPM1-214ENST00000558544 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
TPM1-214ENST00000558544 TSPYL4Q9UJ04 414 aa22.8■■□□□ 1.24
TPM1-214ENST00000558544 CALD1Q05682 793 aaKnown RBP22.79■■□□□ 1.24
TPM1-214ENST00000558544 ITPK1Q13572 414 aa22.79■■□□□ 1.24
TPM1-214ENST00000558544 ZNF496Q96IT1 587 aaPredicted RBP22.79■■□□□ 1.24
TPM1-214ENST00000558544 MYH14Q7Z406 1995 aaKnown RBP22.78■■□□□ 1.24
TPM1-214ENST00000558544 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
TPM1-214ENST00000558544 NGEFQ8N5V2 710 aa22.77■■□□□ 1.24
TPM1-214ENST00000558544 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
TPM1-214ENST00000558544 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
TPM1-214ENST00000558544 UBR3Q6ZT12 1888 aa22.77■■□□□ 1.24
TPM1-214ENST00000558544 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.24
TPM1-214ENST00000558544 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
TPM1-214ENST00000558544 CFAP44Q96MT7 982 aa22.76■■□□□ 1.23
TPM1-214ENST00000558544 BABAM1Q9NWV8 329 aa22.76■■□□□ 1.23
TPM1-214ENST00000558544 CHL1O00533 1208 aa22.76■■□□□ 1.23
TPM1-214ENST00000558544 IFT57Q9NWB7 429 aa22.76■■□□□ 1.23
TPM1-214ENST00000558544 ZNF853P0CG23 659 aa22.75■■□□□ 1.23
TPM1-214ENST00000558544 GNAI1P63096 354 aa22.75■■□□□ 1.23
TPM1-214ENST00000558544 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
TPM1-214ENST00000558544 EIF4A1P60842 406 aaKnown RBP22.74■■□□□ 1.23
TPM1-214ENST00000558544 ZNF827Q17R98 1081 aa22.74■■□□□ 1.23
TPM1-214ENST00000558544 NBPF14Q5TI25 921 aa22.74■■□□□ 1.23
TPM1-214ENST00000558544 VSIG10Q8N0Z9 540 aa22.74■■□□□ 1.23
TPM1-214ENST00000558544 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
TPM1-214ENST00000558544 WDR63Q8IWG1 891 aa22.73■■□□□ 1.23
TPM1-214ENST00000558544 IL16Q14005 1332 aa22.73■■□□□ 1.23
TPM1-214ENST00000558544 ZNF521Q96K83 1311 aa22.73■■□□□ 1.23
TPM1-214ENST00000558544 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
TPM1-214ENST00000558544 STK32BQ9NY57 414 aa22.72■■□□□ 1.23
TPM1-214ENST00000558544 PRAMEF22A3QJZ6 481 aa22.71■■□□□ 1.23
TPM1-214ENST00000558544 AKT1S1Q96B36 256 aa22.71■■□□□ 1.23
TPM1-214ENST00000558544 SLC15A2Q16348 729 aa22.7■■□□□ 1.22
TPM1-214ENST00000558544 SNRPA1P09661 255 aaKnown RBP22.69■■□□□ 1.22
TPM1-214ENST00000558544 HMGB2P26583 209 aaKnown RBP22.69■■□□□ 1.22
TPM1-214ENST00000558544 TSR2Q969E8 191 aaKnown RBP22.69■■□□□ 1.22
TPM1-214ENST00000558544 AK7Q96M32 723 aa22.69■■□□□ 1.22
TPM1-214ENST00000558544 CNTNAP4Q9C0A0 1308 aa22.68■■□□□ 1.22
TPM1-214ENST00000558544 CYP19A1P11511 503 aaPredicted RBP22.68■■□□□ 1.22
TPM1-214ENST00000558544 CRKLP46109 303 aaKnown RBP22.68■■□□□ 1.22
TPM1-214ENST00000558544 R3HDM1Q15032 1099 aaKnown RBP22.68■■□□□ 1.22
TPM1-214ENST00000558544 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
TPM1-214ENST00000558544 SPINK5Q9NQ38 1064 aaPredicted RBP22.68■■□□□ 1.22
TPM1-214ENST00000558544 CASZ1Q86V15 1759 aa22.68■■□□□ 1.22
TPM1-214ENST00000558544 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms