RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ASAP1Q9ULH1 1129 aa33.7■■■□□ 2.99
SMAD6-202ENST00000557916 TEFQ10587 303 aa33.7■■■□□ 2.98
SMAD6-202ENST00000557916 DCTN1Q14203 1278 aa33.7■■■□□ 2.98
SMAD6-202ENST00000557916 FAM9BQ8IZU0 186 aa33.7■■■□□ 2.98
SMAD6-202ENST00000557916 RRP7AQ9Y3A4 280 aaKnown RBP33.7■■■□□ 2.98
SMAD6-202ENST00000557916 CEMIPQ8WUJ3 1361 aa33.69■■■□□ 2.98
SMAD6-202ENST00000557916 PALLDQ8WX93 1383 aa33.69■■■□□ 2.98
SMAD6-202ENST00000557916 MRC1P22897 1456 aa33.69■■■□□ 2.98
SMAD6-202ENST00000557916 VIRMAQ69YN4 1812 aaKnown RBP33.69■■■□□ 2.98
SMAD6-202ENST00000557916 NEUROD2Q15784 382 aa33.68■■■□□ 2.98
SMAD6-202ENST00000557916 ATG3Q9NT62 314 aa33.68■■■□□ 2.98
SMAD6-202ENST00000557916 DLG5Q8TDM6 1919 aa33.66■■■□□ 2.98
SMAD6-202ENST00000557916 APAF1O14727 1248 aa33.65■■■□□ 2.98
SMAD6-202ENST00000557916 RREB1Q92766 1687 aa33.64■■■□□ 2.98
SMAD6-202ENST00000557916 LMOD3Q0VAK6 560 aa33.63■■■□□ 2.97
SMAD6-202ENST00000557916 SLC27A3Q5K4L6 730 aa33.63■■■□□ 2.97
SMAD6-202ENST00000557916 CCNL1Q9UK58 526 aaPredicted RBP33.62■■■□□ 2.97
SMAD6-202ENST00000557916 LY75O60449 1722 aa33.62■■■□□ 2.97
SMAD6-202ENST00000557916 LRRC4BQ9NT99 713 aa33.62■■■□□ 2.97
SMAD6-202ENST00000557916 KCNQ4P56696 695 aa33.61■■■□□ 2.97
SMAD6-202ENST00000557916 THUMPD2Q9BTF0 503 aaKnown RBP33.6■■■□□ 2.97
SMAD6-202ENST00000557916 SLC39A6Q13433 755 aa33.59■■■□□ 2.97
SMAD6-202ENST00000557916 LOC102724428A0A0B4J2F2 783 aa33.58■■■□□ 2.97
SMAD6-202ENST00000557916 SIK1P57059 783 aa33.58■■■□□ 2.97
SMAD6-202ENST00000557916 NUP188Q5SRE5 1749 aa33.58■■■□□ 2.97
SMAD6-202ENST00000557916 BTBD11A6QL63 1104 aa33.57■■■□□ 2.96
SMAD6-202ENST00000557916 RBM42Q9BTD8 480 aaKnown RBP33.57■■■□□ 2.96
SMAD6-202ENST00000557916 TRIM35Q9UPQ4 493 aa33.57■■■□□ 2.96
SMAD6-202ENST00000557916 SIPA1L3O60292 1781 aaPredicted RBP33.56■■■□□ 2.96
SMAD6-202ENST00000557916 PTCD1O75127 700 aaKnown RBP33.55■■■□□ 2.96
SMAD6-202ENST00000557916 TAF7Q15545 349 aaPredicted RBP33.55■■■□□ 2.96
SMAD6-202ENST00000557916 NBPF14Q5TI25 921 aa33.55■■■□□ 2.96
SMAD6-202ENST00000557916 TTC5Q8N0Z6 440 aa33.53■■■□□ 2.96
SMAD6-202ENST00000557916 SENP3-EIF4A1A0A087X0R7 540 aa33.53■■■□□ 2.96
SMAD6-202ENST00000557916 ATP6V1AP38606 617 aa33.53■■■□□ 2.96
SMAD6-202ENST00000557916 ZNF790Q6PG37 636 aa33.52■■■□□ 2.96
SMAD6-202ENST00000557916 PAPPAQ13219 1627 aa33.51■■■□□ 2.96
SMAD6-202ENST00000557916 SLC4A9Q96Q91 983 aa33.51■■■□□ 2.95
SMAD6-202ENST00000557916 ANO8Q9HCE9 1232 aaPredicted RBP33.5■■■□□ 2.95
SMAD6-202ENST00000557916 HMGB2P26583 209 aaKnown RBP33.49■■■□□ 2.95
SMAD6-202ENST00000557916 MIS18AQ9NYP9 233 aa33.49■■■□□ 2.95
SMAD6-202ENST00000557916 STK32BQ9NY57 414 aa33.48■■■□□ 2.95
SMAD6-202ENST00000557916 KCNQ3O43525 872 aa33.47■■■□□ 2.95
SMAD6-202ENST00000557916 ITPK1Q13572 414 aa33.47■■■□□ 2.95
SMAD6-202ENST00000557916 KCPQ6ZWJ8 1503 aa33.46■■■□□ 2.95
SMAD6-202ENST00000557916 SLC15A2Q16348 729 aa33.45■■■□□ 2.94
SMAD6-202ENST00000557916 ZNF496Q96IT1 587 aaPredicted RBP33.45■■■□□ 2.94
SMAD6-202ENST00000557916 R3HDM1Q15032 1099 aaKnown RBP33.44■■■□□ 2.94
SMAD6-202ENST00000557916 ZNF827Q17R98 1081 aa33.44■■■□□ 2.94
SMAD6-202ENST00000557916 CCDC27Q2M243 656 aa33.44■■■□□ 2.94
SMAD6-202ENST00000557916 NCBP3Q53F19 620 aaKnown RBP33.44■■■□□ 2.94
SMAD6-202ENST00000557916 LINC00116Q8NCU8 138 aa33.44■■■□□ 2.94
SMAD6-202ENST00000557916 AKT1S1Q96B36 256 aa33.43■■■□□ 2.94
SMAD6-202ENST00000557916 FMNL2Q96PY5 1086 aa33.43■■■□□ 2.94
SMAD6-202ENST00000557916 C5P01031 1676 aa33.43■■■□□ 2.94
SMAD6-202ENST00000557916 UBR2Q8IWV8 1755 aa33.42■■■□□ 2.94
SMAD6-202ENST00000557916 ZNF831Q5JPB2 1677 aa33.42■■■□□ 2.94
SMAD6-202ENST00000557916 VSIG10Q8N0Z9 540 aa33.42■■■□□ 2.94
SMAD6-202ENST00000557916 SALL2Q9Y467 1007 aaPredicted RBP33.42■■■□□ 2.94
SMAD6-202ENST00000557916 PSDA5PKW4 1024 aaPredicted RBP33.41■■■□□ 2.94
SMAD6-202ENST00000557916 TAF1LQ8IZX4 1826 aa33.4■■■□□ 2.94
SMAD6-202ENST00000557916 CALD1Q05682 793 aaKnown RBP33.4■■■□□ 2.94
SMAD6-202ENST00000557916 BABAM1Q9NWV8 329 aa33.4■■■□□ 2.94
SMAD6-202ENST00000557916 TSPYL4Q9UJ04 414 aa33.4■■■□□ 2.94
SMAD6-202ENST00000557916 HEG1Q9ULI3 1381 aa33.39■■■□□ 2.94
SMAD6-202ENST00000557916 WWC1Q8IX03 1113 aa33.39■■■□□ 2.94
SMAD6-202ENST00000557916 LAS1LQ9Y4W2 734 aaKnown RBP33.39■■■□□ 2.94
SMAD6-202ENST00000557916 DNAJC10Q8IXB1 793 aa33.38■■■□□ 2.93
SMAD6-202ENST00000557916 TFCP2L1Q9NZI6 479 aa33.37■■■□□ 2.93
SMAD6-202ENST00000557916 CHL1O00533 1208 aa33.36■■■□□ 2.93
SMAD6-202ENST00000557916 NGEFQ8N5V2 710 aa33.36■■■□□ 2.93
SMAD6-202ENST00000557916 AK7Q96M32 723 aa33.36■■■□□ 2.93
SMAD6-202ENST00000557916 C4BP0C0L5 1744 aa33.36■■■□□ 2.93
SMAD6-202ENST00000557916 CFAP44Q96MT7 982 aa33.36■■■□□ 2.93
SMAD6-202ENST00000557916 TJP1Q07157 1748 aa33.35■■■□□ 2.93
SMAD6-202ENST00000557916 KDM3BQ7LBC6 1761 aa33.35■■■□□ 2.93
SMAD6-202ENST00000557916 CICQ96RK0 1608 aaPredicted RBP33.34■■■□□ 2.93
SMAD6-202ENST00000557916 EIF4A1P60842 406 aaKnown RBP33.34■■■□□ 2.93
SMAD6-202ENST00000557916 TEX13AQ9BXU3 409 aaPredicted RBP33.33■■■□□ 2.93
SMAD6-202ENST00000557916 SNRPA1P09661 255 aaKnown RBP33.32■■■□□ 2.92
SMAD6-202ENST00000557916 RC3H1Q5TC82 1133 aaKnown RBP33.32■■■□□ 2.92
SMAD6-202ENST00000557916 IFT57Q9NWB7 429 aa33.32■■■□□ 2.92
SMAD6-202ENST00000557916 CNTNAP4Q9C0A0 1308 aa33.32■■■□□ 2.92
SMAD6-202ENST00000557916 CYP19A1P11511 503 aaPredicted RBP33.31■■■□□ 2.92
SMAD6-202ENST00000557916 COL5A3P25940 1745 aaPredicted RBP33.31■■■□□ 2.92
SMAD6-202ENST00000557916 CRKLP46109 303 aaKnown RBP33.31■■■□□ 2.92
SMAD6-202ENST00000557916 GNAI1P63096 354 aa33.31■■■□□ 2.92
SMAD6-202ENST00000557916 GNPATO15228 680 aa33.3■■■□□ 2.92
SMAD6-202ENST00000557916 ZNF853P0CG23 659 aa33.3■■■□□ 2.92
SMAD6-202ENST00000557916 STARD3NLO95772 234 aa33.29■■■□□ 2.92
SMAD6-202ENST00000557916 PNPLA7Q6ZV29 1317 aa33.28■■■□□ 2.92
SMAD6-202ENST00000557916 PRAMEF22A3QJZ6 481 aa33.28■■■□□ 2.92
SMAD6-202ENST00000557916 WDR63Q8IWG1 891 aa33.28■■■□□ 2.92
SMAD6-202ENST00000557916 MBIPQ9NS73 344 aa33.28■■■□□ 2.92
SMAD6-202ENST00000557916 INTS5Q6P9B9 1019 aaKnown RBP33.27■■■□□ 2.92
SMAD6-202ENST00000557916 CCDC87Q9NVE4 849 aa33.27■■■□□ 2.92
SMAD6-202ENST00000557916 USP16Q9Y5T5 823 aa33.27■■■□□ 2.92
SMAD6-202ENST00000557916 IL16Q14005 1332 aa33.26■■■□□ 2.91
SMAD6-202ENST00000557916 GIGYF1O75420 1035 aaPredicted RBP33.26■■■□□ 2.91
SMAD6-202ENST00000557916 PDGFDQ9GZP0 370 aaPredicted RBP33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms