RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 TBC1D9Q6ZT07 1266 aa16.37■□□□□ 0.21
CPNE6-204ENST00000557829 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
CPNE6-204ENST00000557829 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
CPNE6-204ENST00000557829 K7ELQ4 463 aaPredicted RBP16.37■□□□□ 0.21
CPNE6-204ENST00000557829 CLEC17AQ6ZS10 378 aa16.37■□□□□ 0.21
CPNE6-204ENST00000557829 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
CPNE6-204ENST00000557829 IP6K1Q92551 441 aa16.36■□□□□ 0.21
CPNE6-204ENST00000557829 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
CPNE6-204ENST00000557829 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
CPNE6-204ENST00000557829 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
CPNE6-204ENST00000557829 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
CPNE6-204ENST00000557829 GRPEL1Q9HAV7 217 aa16.36■□□□□ 0.21
CPNE6-204ENST00000557829 DCTPP1Q9H773 170 aa16.35■□□□□ 0.21
CPNE6-204ENST00000557829 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
CPNE6-204ENST00000557829 CLCN1P35523 988 aa16.34■□□□□ 0.21
CPNE6-204ENST00000557829 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
CPNE6-204ENST00000557829 EYA1Q99502 592 aa16.34■□□□□ 0.21
CPNE6-204ENST00000557829 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
CPNE6-204ENST00000557829 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
CPNE6-204ENST00000557829 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.2
CPNE6-204ENST00000557829 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
CPNE6-204ENST00000557829 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
CPNE6-204ENST00000557829 IGSF1Q8N6C5 1336 aa16.32■□□□□ 0.2
CPNE6-204ENST00000557829 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
CPNE6-204ENST00000557829 PHRF1Q9P1Y6 1649 aaKnown RBP16.31■□□□□ 0.2
CPNE6-204ENST00000557829 RABEP1Q15276 862 aa16.31■□□□□ 0.2
CPNE6-204ENST00000557829 PLEKHM2Q8IWE5 1019 aa16.31■□□□□ 0.2
CPNE6-204ENST00000557829 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
CPNE6-204ENST00000557829 PANK2Q9BZ23 570 aa16.31■□□□□ 0.2
CPNE6-204ENST00000557829 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
CPNE6-204ENST00000557829 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
CPNE6-204ENST00000557829 ANKRD44Q8N8A2 993 aa16.3■□□□□ 0.2
CPNE6-204ENST00000557829 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
CPNE6-204ENST00000557829 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
CPNE6-204ENST00000557829 GOLGA6L22H0YM25 854 aa16.3■□□□□ 0.2
CPNE6-204ENST00000557829 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
CPNE6-204ENST00000557829 CRYBG1Q9Y4K1 1723 aa16.29■□□□□ 0.2
CPNE6-204ENST00000557829 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
CPNE6-204ENST00000557829 KDRP35968 1356 aa16.29■□□□□ 0.2
CPNE6-204ENST00000557829 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
CPNE6-204ENST00000557829 CD2BP2O95400 341 aaKnown RBP16.28■□□□□ 0.2
CPNE6-204ENST00000557829 GSPT1P15170 499 aaKnown RBP16.28■□□□□ 0.2
CPNE6-204ENST00000557829 CHRNA2Q15822 529 aa16.28■□□□□ 0.2
CPNE6-204ENST00000557829 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
CPNE6-204ENST00000557829 RGPD5Q99666 1765 aa16.28■□□□□ 0.2
CPNE6-204ENST00000557829 PTPRCP08575 1304 aa16.27■□□□□ 0.2
CPNE6-204ENST00000557829 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
CPNE6-204ENST00000557829 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
CPNE6-204ENST00000557829 ATP10DQ9P241 1426 aa16.27■□□□□ 0.2
CPNE6-204ENST00000557829 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.19
CPNE6-204ENST00000557829 RGS12O14924 1447 aa16.26■□□□□ 0.19
CPNE6-204ENST00000557829 CHL1O00533 1208 aa16.26■□□□□ 0.19
CPNE6-204ENST00000557829 NUCB2P80303 420 aa16.26■□□□□ 0.19
CPNE6-204ENST00000557829 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
CPNE6-204ENST00000557829 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
CPNE6-204ENST00000557829 CPDO75976 1380 aa16.25■□□□□ 0.19
CPNE6-204ENST00000557829 FAM83GA6ND36 823 aa16.25■□□□□ 0.19
CPNE6-204ENST00000557829 KLHL40Q2TBA0 621 aa16.25■□□□□ 0.19
CPNE6-204ENST00000557829 CWC22Q9HCG8 908 aaKnown RBP16.25■□□□□ 0.19
CPNE6-204ENST00000557829 JCADQ9P266 1359 aa16.25■□□□□ 0.19
CPNE6-204ENST00000557829 LRP6O75581 1613 aa16.25■□□□□ 0.19
CPNE6-204ENST00000557829 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
CPNE6-204ENST00000557829 ARXQ96QS3 562 aa16.24■□□□□ 0.19
CPNE6-204ENST00000557829 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
CPNE6-204ENST00000557829 ERBB3P21860 1342 aa16.23■□□□□ 0.19
CPNE6-204ENST00000557829 COL18A1P39060 1754 aa16.23■□□□□ 0.19
CPNE6-204ENST00000557829 BAG4O95429 457 aaKnown RBP16.23■□□□□ 0.19
CPNE6-204ENST00000557829 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
CPNE6-204ENST00000557829 CEP85Q6P2H3 762 aa16.23■□□□□ 0.19
CPNE6-204ENST00000557829 SSFA2P28290 1259 aa16.23■□□□□ 0.19
CPNE6-204ENST00000557829 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
CPNE6-204ENST00000557829 GAS2L3Q86XJ1 694 aa16.23■□□□□ 0.19
CPNE6-204ENST00000557829 ESPNB1AK53 854 aa16.22■□□□□ 0.19
CPNE6-204ENST00000557829 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
CPNE6-204ENST00000557829 CYP2E1P05181 493 aaPredicted RBP16.21■□□□□ 0.19
CPNE6-204ENST00000557829 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
CPNE6-204ENST00000557829 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.19
CPNE6-204ENST00000557829 TRIM44Q96DX7 344 aaPredicted RBP16.21■□□□□ 0.19
CPNE6-204ENST00000557829 PPP1R9BQ96SB3 815 aa16.21■□□□□ 0.19
CPNE6-204ENST00000557829 LRRC37A3O60309 1634 aa16.21■□□□□ 0.19
CPNE6-204ENST00000557829 REC8O95072 547 aa16.2■□□□□ 0.18
CPNE6-204ENST00000557829 OSBPL3Q9H4L5 887 aa16.2■□□□□ 0.18
CPNE6-204ENST00000557829 RRP9O43818 475 aaKnown RBP16.2■□□□□ 0.18
CPNE6-204ENST00000557829 HMMRO75330 724 aa16.2■□□□□ 0.18
CPNE6-204ENST00000557829 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
CPNE6-204ENST00000557829 AK9Q5TCS8 1911 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 ST18O60284 1047 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 SDSP20132 328 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 ZNF445P59923 1031 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 CAMTA1Q9Y6Y1 1673 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 CRB1P82279 1406 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
CPNE6-204ENST00000557829 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
CPNE6-204ENST00000557829 MCM10Q7L590 875 aa16.19■□□□□ 0.18
CPNE6-204ENST00000557829 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
CPNE6-204ENST00000557829 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
CPNE6-204ENST00000557829 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
CPNE6-204ENST00000557829 DDX49Q9Y6V7 483 aaKnown RBP16.18■□□□□ 0.18
CPNE6-204ENST00000557829 ABCC6O95255 1503 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms