RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 IRX5P78411 483 aaPredicted RBP15.63■□□□□ 0.09
LINC00648-204ENST00000557749 FBXO22Q8NEZ5 403 aa15.62■□□□□ 0.09
LINC00648-204ENST00000557749 COLQQ9Y215 455 aaPredicted RBP15.62■□□□□ 0.09
LINC00648-204ENST00000557749 KNSTRNQ9Y448 316 aa15.62■□□□□ 0.09
LINC00648-204ENST00000557749 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
LINC00648-204ENST00000557749 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
LINC00648-204ENST00000557749 MS4A4AQ96JQ5 239 aa15.61■□□□□ 0.09
LINC00648-204ENST00000557749 PANK3Q9H999 370 aa15.61■□□□□ 0.09
LINC00648-204ENST00000557749 LRP5O75197 1615 aa15.61■□□□□ 0.09
LINC00648-204ENST00000557749 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
LINC00648-204ENST00000557749 TATP17735 454 aaPredicted RBP15.6■□□□□ 0.09
LINC00648-204ENST00000557749 IER5LQ5T953 404 aa15.6■□□□□ 0.09
LINC00648-204ENST00000557749 ZCRB1Q8TBF4 217 aaKnown RBP15.6■□□□□ 0.09
LINC00648-204ENST00000557749 WASHC2AQ641Q2 1341 aa15.6■□□□□ 0.09
LINC00648-204ENST00000557749 HSP90AB2PQ58FF8 381 aa15.59■□□□□ 0.09
LINC00648-204ENST00000557749 NUP188Q5SRE5 1749 aa15.59■□□□□ 0.09
LINC00648-204ENST00000557749 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
LINC00648-204ENST00000557749 MKRN3Q13064 507 aaKnown RBP15.58■□□□□ 0.08
LINC00648-204ENST00000557749 R3HDM1Q15032 1099 aaKnown RBP15.58■□□□□ 0.08
LINC00648-204ENST00000557749 PDCD7Q8N8D1 485 aaKnown RBP15.58■□□□□ 0.08
LINC00648-204ENST00000557749 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
LINC00648-204ENST00000557749 PCDH11XQ9BZA7 1347 aa15.58■□□□□ 0.08
LINC00648-204ENST00000557749 PCDH11YQ9BZA8 1340 aa15.58■□□□□ 0.08
LINC00648-204ENST00000557749 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
LINC00648-204ENST00000557749 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
LINC00648-204ENST00000557749 C7P10643 843 aa15.57■□□□□ 0.08
LINC00648-204ENST00000557749 FBLN1P23142 703 aa15.57■□□□□ 0.08
LINC00648-204ENST00000557749 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
LINC00648-204ENST00000557749 DDX54Q8TDD1 881 aaKnown RBP15.57■□□□□ 0.08
LINC00648-204ENST00000557749 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
LINC00648-204ENST00000557749 METRNQ9UJH8 293 aa15.57■□□□□ 0.08
LINC00648-204ENST00000557749 EMILIN1Q9Y6C2 1016 aa15.57■□□□□ 0.08
LINC00648-204ENST00000557749 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
LINC00648-204ENST00000557749 MAP2P11137 1827 aaKnown RBP15.55■□□□□ 0.08
LINC00648-204ENST00000557749 MEGF6O75095 1541 aa15.55■□□□□ 0.08
LINC00648-204ENST00000557749 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
LINC00648-204ENST00000557749 MORC1Q86VD1 984 aa15.55■□□□□ 0.08
LINC00648-204ENST00000557749 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
LINC00648-204ENST00000557749 NCAPD2Q15021 1401 aa15.54■□□□□ 0.08
LINC00648-204ENST00000557749 TXNRD1Q16881 649 aa15.54■□□□□ 0.08
LINC00648-204ENST00000557749 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
LINC00648-204ENST00000557749 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
LINC00648-204ENST00000557749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC00648-204ENST00000557749 SPG7Q9UQ90 795 aa15.54■□□□□ 0.08
LINC00648-204ENST00000557749 KAT6BQ8WYB5 2073 aa15.53■□□□□ 0.08
LINC00648-204ENST00000557749 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
LINC00648-204ENST00000557749 ACSBG1Q96GR2 724 aa15.53■□□□□ 0.08
LINC00648-204ENST00000557749 RGPD2P0DJD1 1756 aa15.53■□□□□ 0.08
LINC00648-204ENST00000557749 KCNQ2O43526 872 aa15.51■□□□□ 0.07
LINC00648-204ENST00000557749 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
LINC00648-204ENST00000557749 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
LINC00648-204ENST00000557749 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
LINC00648-204ENST00000557749 BTAF1O14981 1849 aa15.51■□□□□ 0.07
LINC00648-204ENST00000557749 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
LINC00648-204ENST00000557749 OCEL1Q9H607 264 aa15.5■□□□□ 0.07
LINC00648-204ENST00000557749 SPON1Q9HCB6 807 aa15.5■□□□□ 0.07
LINC00648-204ENST00000557749 NPC1L1Q9UHC9 1359 aa15.49■□□□□ 0.07
LINC00648-204ENST00000557749 PKD1L3Q7Z443 1732 aa15.48■□□□□ 0.07
LINC00648-204ENST00000557749 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
LINC00648-204ENST00000557749 SHANK3Q9BYB0 1731 aa15.48■□□□□ 0.07
LINC00648-204ENST00000557749 PPP1R37O75864 691 aa15.48■□□□□ 0.07
LINC00648-204ENST00000557749 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
LINC00648-204ENST00000557749 PTF1AQ7RTS3 328 aa15.48■□□□□ 0.07
LINC00648-204ENST00000557749 EYA1Q99502 592 aa15.48■□□□□ 0.07
LINC00648-204ENST00000557749 IGSF1Q8N6C5 1336 aa15.47■□□□□ 0.07
LINC00648-204ENST00000557749 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
LINC00648-204ENST00000557749 EIF4A2Q14240 407 aaKnown RBP15.47■□□□□ 0.07
LINC00648-204ENST00000557749 SLC15A2Q16348 729 aa15.47■□□□□ 0.07
LINC00648-204ENST00000557749 SRCAPQ6ZRS2 3230 aa15.46■□□□□ 0.07
LINC00648-204ENST00000557749 POTEJP0CG39 1038 aa15.46■□□□□ 0.07
LINC00648-204ENST00000557749 AMOTQ4VCS5 1084 aa15.46■□□□□ 0.07
LINC00648-204ENST00000557749 IFNL2Q8IZJ0 200 aa15.46■□□□□ 0.07
LINC00648-204ENST00000557749 SMARCC1Q92922 1105 aaPredicted RBP15.46■□□□□ 0.07
LINC00648-204ENST00000557749 PPP1R1BQ9UD71 204 aaPredicted RBP15.45■□□□□ 0.06
LINC00648-204ENST00000557749 PLEKHO1Q53GL0 409 aaPredicted RBP15.44■□□□□ 0.06
LINC00648-204ENST00000557749 ANO8Q9HCE9 1232 aaPredicted RBP15.44■□□□□ 0.06
LINC00648-204ENST00000557749 CYP27B1O15528 508 aa15.43■□□□□ 0.06
LINC00648-204ENST00000557749 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
LINC00648-204ENST00000557749 PAPPAQ13219 1627 aa15.43■□□□□ 0.06
LINC00648-204ENST00000557749 SEC24BO95487 1268 aa15.42■□□□□ 0.06
LINC00648-204ENST00000557749 PAXIP1Q6ZW49 1069 aaPredicted RBP15.42■□□□□ 0.06
LINC00648-204ENST00000557749 SLC16A10Q8TF71 515 aa15.42■□□□□ 0.06
LINC00648-204ENST00000557749 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
LINC00648-204ENST00000557749 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
LINC00648-204ENST00000557749 CASZ1Q86V15 1759 aa15.41■□□□□ 0.06
LINC00648-204ENST00000557749 LY75O60449 1722 aa15.41■□□□□ 0.06
LINC00648-204ENST00000557749 PLCG2P16885 1265 aa15.41■□□□□ 0.06
LINC00648-204ENST00000557749 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
LINC00648-204ENST00000557749 PHKG2P15735 406 aa15.4■□□□□ 0.06
LINC00648-204ENST00000557749 C1orf141Q5JVX7 400 aa15.4■□□□□ 0.06
LINC00648-204ENST00000557749 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
LINC00648-204ENST00000557749 TMOD3Q9NYL9 352 aa15.4■□□□□ 0.06
LINC00648-204ENST00000557749 KDRP35968 1356 aa15.39■□□□□ 0.05
LINC00648-204ENST00000557749 PALLDQ8WX93 1383 aa15.39■□□□□ 0.05
LINC00648-204ENST00000557749 CC2D1BQ5T0F9 858 aaKnown RBP15.39■□□□□ 0.05
LINC00648-204ENST00000557749 SPRYD3Q8NCJ5 442 aa15.39■□□□□ 0.05
LINC00648-204ENST00000557749 FLAD1Q8NFF5 587 aa15.39■□□□□ 0.05
LINC00648-204ENST00000557749 DCAF5Q96JK2 942 aa15.39■□□□□ 0.05
LINC00648-204ENST00000557749 QSER1Q2KHR3 1735 aa15.39■□□□□ 0.05
LINC00648-204ENST00000557749 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms