RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NNTQ13423 1086 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 ESYT1Q9BSJ8 1104 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 PRKD2Q9BZL6 878 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 TIMP2P16035 220 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 FSHRP23945 695 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 SCTRP47872 440 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 MEIOBQ8N635 442 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 NBPF15Q8N660 670 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 SCHIP1Q9P0W5 487 aaPredicted RBP3.17□□□□□ -1.9
HIF1A-212ENST00000557538 MTMR7Q9Y216 660 aa3.17□□□□□ -1.9
HIF1A-212ENST00000557538 SND1Q7KZF4 910 aaKnown RBP eCLIP3.16□□□□□ -1.9
HIF1A-212ENST00000557538 CCER1Q8TC90 406 aaPredicted RBP3.16□□□□□ -1.9
HIF1A-212ENST00000557538 ETNK1Q9HBU6 452 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 NRG2O14511 850 aaPredicted RBP3.16□□□□□ -1.9
HIF1A-212ENST00000557538 IL2RAP01589 272 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 ECM1Q16610 540 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 OXLD1Q5BKU9 147 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 PPARGC1BQ86YN6 1023 aaKnown RBP3.16□□□□□ -1.9
HIF1A-212ENST00000557538 DEPDC4Q8N2C3 294 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 C7orf43Q8WVR3 580 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 C11orf16Q9NQ32 467 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 TLL2Q9Y6L7 1015 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 ATP2B4P23634 1241 aa3.16□□□□□ -1.9
HIF1A-212ENST00000557538 SF3B2Q13435 895 aaKnown RBP3.15□□□□□ -1.9
HIF1A-212ENST00000557538 CYP4X1Q8N118 509 aa3.15□□□□□ -1.9
HIF1A-212ENST00000557538 C2orf49Q9BVC5 232 aaPredicted RBP3.15□□□□□ -1.9
HIF1A-212ENST00000557538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.15□□□□□ -1.95e-6■■■■□ 23.1
HIF1A-212ENST00000557538 AMOTL2Q9Y2J4 779 aa3.15□□□□□ -1.9
HIF1A-212ENST00000557538 SOWAHDA6NJG2 315 aa3.15□□□□□ -1.91
HIF1A-212ENST00000557538 A6NJY4 79 aa3.15□□□□□ -1.91
HIF1A-212ENST00000557538 SPINT1O43278 529 aa3.15□□□□□ -1.91
HIF1A-212ENST00000557538 C21orf2O43822 256 aa3.15□□□□□ -1.91
HIF1A-212ENST00000557538 TMPRSS4Q9NRS4 437 aa3.15□□□□□ -1.91
HIF1A-212ENST00000557538 SFI1A8K8P3 1242 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 ZDHHC3Q9NYG2 299 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 RBM19Q9Y4C8 960 aaKnown RBP3.14□□□□□ -1.91
HIF1A-212ENST00000557538 WASF2Q9Y6W5 498 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 RGS22Q8NE09 1264 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 TPCN2Q8NHX9 752 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 CITED4Q96RK1 184 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 TSEN34Q9BSV6 310 aaKnown RBP3.14□□□□□ -1.91
HIF1A-212ENST00000557538 A0A1W2PRU2 124 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 EML1O00423 815 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 ALDH1A1P00352 501 aa3.14□□□□□ -1.91
HIF1A-212ENST00000557538 LBRQ14739 615 aaKnown RBP3.14□□□□□ -1.91
HIF1A-212ENST00000557538 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.14□□□□□ -1.91
HIF1A-212ENST00000557538 ATAD2Q6PL18 1390 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 ICMTO60725 284 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 J3QL48 77 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 ZIC2O95409 532 aaPredicted RBP3.13□□□□□ -1.91
HIF1A-212ENST00000557538 PSMA6P60900 246 aaKnown RBP3.13□□□□□ -1.91
HIF1A-212ENST00000557538 CENPCQ03188 943 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 HELQQ8TDG4 1101 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 CDCA8Q53HL2 280 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 ESF1Q9H501 851 aaKnown RBP3.13□□□□□ -1.91
HIF1A-212ENST00000557538 CYLDQ9NQC7 956 aa3.13□□□□□ -1.91
HIF1A-212ENST00000557538 SOS2Q07890 1332 aaPredicted RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 IER5Q5VY09 327 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 CCDC9Q9Y3X0 531 aaKnown RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 TTC24A2A3L6 582 aaPredicted RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 DNAJC14Q6Y2X3 702 aaPredicted RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 RHBDD1Q8TEB9 315 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 ZDHHC1Q8WTX9 485 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 HPS1Q92902 700 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 ITPKCQ96DU7 683 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 GMCL1Q96IK5 515 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 TNFRSF10BO14763 440 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 FKBP5Q13451 457 aaPredicted RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 HIF1AQ16665 826 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 RTN1Q16799 776 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 FOXD4L5Q5VV16 416 aaPredicted RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 TSEN2Q8NCE0 465 aaKnown RBP3.12□□□□□ -1.91
HIF1A-212ENST00000557538 IVNS1ABPQ9Y6Y0 642 aa3.12□□□□□ -1.91
HIF1A-212ENST00000557538 WDR4P57081 412 aaKnown RBP3.11□□□□□ -1.91
HIF1A-212ENST00000557538 ARID5BQ14865 1188 aa3.11□□□□□ -1.91
HIF1A-212ENST00000557538 SLC9A9Q8IVB4 645 aa3.11□□□□□ -1.91
HIF1A-212ENST00000557538 CNKSR1Q969H4 720 aa3.11□□□□□ -1.91
HIF1A-212ENST00000557538 ALKBH8Q96BT7 664 aaKnown RBP3.11□□□□□ -1.91
HIF1A-212ENST00000557538 FAM13AO94988 1023 aa3.11□□□□□ -1.91
HIF1A-212ENST00000557538 NOS2P35228 1153 aa3.11□□□□□ -1.91
HIF1A-212ENST00000557538 SAMD5Q5TGI4 173 aa3.11□□□□□ -1.91
HIF1A-212ENST00000557538 ZNF594Q96JF6 807 aaPredicted RBP3.11□□□□□ -1.91
HIF1A-212ENST00000557538 VAMP1P23763 118 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 FKBP4Q02790 459 aaKnown RBP eCLIP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 TNS4Q8IZW8 715 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 NLRP3Q96P20 1036 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 RBCK1Q9BYM8 510 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 QTRT2Q9H974 415 aaKnown RBP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 SERTM1A2A2V5 107 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 ARHGAP4P98171 946 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 FOXC1Q12948 553 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 ALKBH2Q6NS38 261 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 XKR5Q6UX68 686 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 RNF217Q8TC41 542 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 CRISPLD1Q9H336 500 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 ZFAND3Q9H8U3 227 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 PDZRN3Q9UPQ7 1066 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 RBM47A0AV96 593 aaKnown RBP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 C16orf46Q6P387 395 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 LINC00528Q8N1L1 170 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms