RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CASZ1Q86V15 1759 aa14.06□□□□□ -0.16
HNRNPC-232ENST00000557442 CABP4P57796 275 aa14.06□□□□□ -0.16
HNRNPC-232ENST00000557442 GNAT3A8MTJ3 354 aa14.05□□□□□ -0.16
HNRNPC-232ENST00000557442 PROM2Q8N271 834 aa14.05□□□□□ -0.16
HNRNPC-232ENST00000557442 PNNQ9H307 717 aaKnown RBP14.05□□□□□ -0.16
HNRNPC-232ENST00000557442 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
HNRNPC-232ENST00000557442 RNMTO43148 476 aaKnown RBP14.04□□□□□ -0.16
HNRNPC-232ENST00000557442 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
HNRNPC-232ENST00000557442 LGR6Q9HBX8 967 aa14.04□□□□□ -0.16
HNRNPC-232ENST00000557442 PSDA5PKW4 1024 aaPredicted RBP14.03□□□□□ -0.16
HNRNPC-232ENST00000557442 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
HNRNPC-232ENST00000557442 NBPF14Q5TI25 921 aa14.03□□□□□ -0.16
HNRNPC-232ENST00000557442 PLEKHF1Q96S99 279 aa14.03□□□□□ -0.16
HNRNPC-232ENST00000557442 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
HNRNPC-232ENST00000557442 MYH14Q7Z406 1995 aaKnown RBP14.03□□□□□ -0.16
HNRNPC-232ENST00000557442 KCNQ4P56696 695 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 CCDC184Q52MB2 194 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 SLC52A2Q9HAB3 445 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 MRS2Q9HD23 443 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
HNRNPC-232ENST00000557442 LAMB4A4D0S4 1761 aa14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 RTF1Q92541 710 aaKnown RBP14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 ATG3Q9NT62 314 aa14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 KCPQ6ZWJ8 1503 aa14.01□□□□□ -0.17
HNRNPC-232ENST00000557442 TEFQ10587 303 aa14□□□□□ -0.17
HNRNPC-232ENST00000557442 NFE2L2Q16236 605 aa14□□□□□ -0.17
HNRNPC-232ENST00000557442 STK32BQ9NY57 414 aa14□□□□□ -0.17
HNRNPC-232ENST00000557442 LRP5O75197 1615 aa14□□□□□ -0.17
HNRNPC-232ENST00000557442 C4AP0C0L4 1744 aa14□□□□□ -0.17
HNRNPC-232ENST00000557442 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
HNRNPC-232ENST00000557442 SIK1P57059 783 aa13.99□□□□□ -0.17
HNRNPC-232ENST00000557442 MCM10Q7L590 875 aa13.99□□□□□ -0.17
HNRNPC-232ENST00000557442 IL17REQ8NFR9 667 aa13.99□□□□□ -0.17
HNRNPC-232ENST00000557442 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
HNRNPC-232ENST00000557442 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-232ENST00000557442 HTATSF1O43719 755 aaKnown RBP13.97□□□□□ -0.17
HNRNPC-232ENST00000557442 DCTN1Q14203 1278 aa13.97□□□□□ -0.17
HNRNPC-232ENST00000557442 SLC15A2Q16348 729 aa13.97□□□□□ -0.17
HNRNPC-232ENST00000557442 ZNF827Q17R98 1081 aa13.97□□□□□ -0.17
HNRNPC-232ENST00000557442 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
HNRNPC-232ENST00000557442 ATP6V1AP38606 617 aa13.96□□□□□ -0.17
HNRNPC-232ENST00000557442 SLC39A6Q13433 755 aa13.96□□□□□ -0.17
HNRNPC-232ENST00000557442 SRCAPQ6ZRS2 3230 aa13.96□□□□□ -0.17
HNRNPC-232ENST00000557442 COL24A1Q17RW2 1714 aa13.95□□□□□ -0.18
HNRNPC-232ENST00000557442 TMPOP42166 694 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-232ENST00000557442 RIPK4P57078 832 aa13.95□□□□□ -0.18
HNRNPC-232ENST00000557442 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
HNRNPC-232ENST00000557442 RRP7AQ9Y3A4 280 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-232ENST00000557442 HMGB2P26583 209 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-232ENST00000557442 LMOD3Q0VAK6 560 aa13.94□□□□□ -0.18
HNRNPC-232ENST00000557442 ITPK1Q13572 414 aa13.94□□□□□ -0.18
HNRNPC-232ENST00000557442 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
HNRNPC-232ENST00000557442 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
HNRNPC-232ENST00000557442 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
HNRNPC-232ENST00000557442 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
HNRNPC-232ENST00000557442 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-232ENST00000557442 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
HNRNPC-232ENST00000557442 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
HNRNPC-232ENST00000557442 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-232ENST00000557442 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
HNRNPC-232ENST00000557442 ZNF790Q6PG37 636 aa13.92□□□□□ -0.18
HNRNPC-232ENST00000557442 AK7Q96M32 723 aa13.92□□□□□ -0.18
HNRNPC-232ENST00000557442 APAF1O14727 1248 aa13.91□□□□□ -0.18
HNRNPC-232ENST00000557442 PDGFDQ9GZP0 370 aaPredicted RBP13.91□□□□□ -0.18
HNRNPC-232ENST00000557442 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
HNRNPC-232ENST00000557442 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
HNRNPC-232ENST00000557442 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
HNRNPC-232ENST00000557442 GNPATO15228 680 aa13.9□□□□□ -0.19
HNRNPC-232ENST00000557442 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.19
HNRNPC-232ENST00000557442 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.19
HNRNPC-232ENST00000557442 ZNF496Q96IT1 587 aaPredicted RBP13.9□□□□□ -0.19
HNRNPC-232ENST00000557442 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.19
HNRNPC-232ENST00000557442 BCORQ6W2J9 1755 aa13.89□□□□□ -0.19
HNRNPC-232ENST00000557442 KCNQ3O43525 872 aa13.89□□□□□ -0.19
HNRNPC-232ENST00000557442 PHF14O94880 888 aa13.89□□□□□ -0.19
HNRNPC-232ENST00000557442 DNAJC10Q8IXB1 793 aa13.89□□□□□ -0.19
HNRNPC-232ENST00000557442 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
HNRNPC-232ENST00000557442 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
HNRNPC-232ENST00000557442 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
HNRNPC-232ENST00000557442 CRKLP46109 303 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-232ENST00000557442 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
HNRNPC-232ENST00000557442 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
HNRNPC-232ENST00000557442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-232ENST00000557442 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
HNRNPC-232ENST00000557442 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
HNRNPC-232ENST00000557442 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 SSFA2P28290 1259 aa13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
HNRNPC-232ENST00000557442 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms