RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
APEX1-216ENST00000557159 FOXO3O43524 673 aa15.35■□□□□ 0.05
APEX1-216ENST00000557159 GSPT1P15170 499 aaKnown RBP15.35■□□□□ 0.05
APEX1-216ENST00000557159 RBM10P98175 930 aaKnown RBP15.35■□□□□ 0.05
APEX1-216ENST00000557159 TTC22Q5TAA0 569 aa15.35■□□□□ 0.05
APEX1-216ENST00000557159 DCTPP1Q9H773 170 aa15.35■□□□□ 0.05
APEX1-216ENST00000557159 ACEP12821 1306 aa15.35■□□□□ 0.05
APEX1-216ENST00000557159 ITSN1Q15811 1721 aa15.35■□□□□ 0.05
APEX1-216ENST00000557159 VAMP4O75379 141 aa15.34■□□□□ 0.05
APEX1-216ENST00000557159 GTF2F1P35269 517 aaKnown RBP eCLIP15.34■□□□□ 0.05
APEX1-216ENST00000557159 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
APEX1-216ENST00000557159 XPCQ01831 940 aaPredicted RBP15.34■□□□□ 0.05
APEX1-216ENST00000557159 PRIMPOLQ96LW4 560 aa15.34■□□□□ 0.05
APEX1-216ENST00000557159 MON2Q7Z3U7 1717 aa15.34■□□□□ 0.05
APEX1-216ENST00000557159 MAP2P11137 1827 aaKnown RBP15.34■□□□□ 0.05
APEX1-216ENST00000557159 AKAP12Q02952 1782 aa15.34■□□□□ 0.05
APEX1-216ENST00000557159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.33■□□□□ 0.05
APEX1-216ENST00000557159 COG3Q96JB2 828 aa15.33■□□□□ 0.05
APEX1-216ENST00000557159 CCDC94Q9BW85 323 aaPredicted RBP15.33■□□□□ 0.05
APEX1-216ENST00000557159 POLKQ9UBT6 870 aa15.33■□□□□ 0.05
APEX1-216ENST00000557159 MCM2P49736 904 aa15.33■□□□□ 0.04
APEX1-216ENST00000557159 HMGN5P82970 282 aaKnown RBP15.33■□□□□ 0.04
APEX1-216ENST00000557159 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.04
APEX1-216ENST00000557159 MYRIPQ8NFW9 859 aa15.33■□□□□ 0.04
APEX1-216ENST00000557159 API5Q9BZZ5 524 aaKnown RBP15.33■□□□□ 0.04
APEX1-216ENST00000557159 UVSSAQ2YD98 709 aa15.32■□□□□ 0.04
APEX1-216ENST00000557159 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
APEX1-216ENST00000557159 IFT57Q9NWB7 429 aa15.32■□□□□ 0.04
APEX1-216ENST00000557159 ZDHHC9Q9Y397 364 aa15.32■□□□□ 0.04
APEX1-216ENST00000557159 ROBO1Q9Y6N7 1651 aa15.32■□□□□ 0.04
APEX1-216ENST00000557159 NPHP3Q7Z494 1330 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
APEX1-216ENST00000557159 FAM184AQ8NB25 1140 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 KIF1AQ12756 1690 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 CDK12Q9NYV4 1490 aaPredicted RBP15.31■□□□□ 0.04
APEX1-216ENST00000557159 REC8O95072 547 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 ZNF853P0CG23 659 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 GNAI1P63096 354 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 KIAA2012Q0VF49 1180 aa15.31■□□□□ 0.04
APEX1-216ENST00000557159 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
APEX1-216ENST00000557159 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
APEX1-216ENST00000557159 NCLP19338 710 aaKnown RBP15.3■□□□□ 0.04
APEX1-216ENST00000557159 PSME1Q06323 249 aa15.3■□□□□ 0.04
APEX1-216ENST00000557159 IL17RAQ96F46 866 aa15.3■□□□□ 0.04
APEX1-216ENST00000557159 PHF14O94880 888 aa15.29■□□□□ 0.04
APEX1-216ENST00000557159 SOS2Q07890 1332 aaPredicted RBP15.29■□□□□ 0.04
APEX1-216ENST00000557159 DMTNQ08495 405 aa15.29■□□□□ 0.04
APEX1-216ENST00000557159 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
APEX1-216ENST00000557159 USP6P35125 1406 aa15.28■□□□□ 0.04
APEX1-216ENST00000557159 PKP1Q13835 747 aa15.28■□□□□ 0.04
APEX1-216ENST00000557159 NFE2L2Q16236 605 aa15.28■□□□□ 0.04
APEX1-216ENST00000557159 KRT28Q7Z3Y7 464 aa15.28■□□□□ 0.04
APEX1-216ENST00000557159 RPAP2Q8IXW5 612 aaPredicted RBP15.28■□□□□ 0.04
APEX1-216ENST00000557159 BRD1O95696 1058 aa15.27■□□□□ 0.04
APEX1-216ENST00000557159 CUL4AQ13619 759 aa15.27■□□□□ 0.04
APEX1-216ENST00000557159 TSPY26PQ9H489 355 aa15.27■□□□□ 0.04
APEX1-216ENST00000557159 SSH2Q76I76 1423 aa15.27■□□□□ 0.04
APEX1-216ENST00000557159 SYCE3A1L190 88 aa15.27■□□□□ 0.03
APEX1-216ENST00000557159 ANKRD44Q8N8A2 993 aa15.27■□□□□ 0.03
APEX1-216ENST00000557159 PIBF1Q8WXW3 757 aa15.27■□□□□ 0.03
APEX1-216ENST00000557159 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 NHSL1Q5SYE7 1610 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 PXDNQ92626 1479 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 IL13P35225 146 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 LMOD3Q0VAK6 560 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 NME9Q86XW9 330 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 GTPBP4Q9BZE4 634 aaKnown RBP15.26■□□□□ 0.03
APEX1-216ENST00000557159 OSBPL3Q9H4L5 887 aa15.26■□□□□ 0.03
APEX1-216ENST00000557159 RBM27Q9P2N5 1060 aaKnown RBP15.26■□□□□ 0.03
APEX1-216ENST00000557159 AHDC1Q5TGY3 1603 aaPredicted RBP15.26■□□□□ 0.03
APEX1-216ENST00000557159 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
APEX1-216ENST00000557159 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
APEX1-216ENST00000557159 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
APEX1-216ENST00000557159 ERC2O15083 957 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 ANAPC15P60006 121 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 C1orf115Q9H7X2 142 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 SPTLC3Q9NUV7 552 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 SDSP20132 328 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.24■□□□□ 0.03
APEX1-216ENST00000557159 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
APEX1-216ENST00000557159 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
APEX1-216ENST00000557159 TTC21AQ8NDW8 1320 aa15.23■□□□□ 0.03
APEX1-216ENST00000557159 KIF20AO95235 890 aa15.23■□□□□ 0.03
APEX1-216ENST00000557159 ZSCAN20P17040 1043 aaPredicted RBP15.23■□□□□ 0.03
APEX1-216ENST00000557159 TMEM87AQ8NBN3 555 aa15.23■□□□□ 0.03
APEX1-216ENST00000557159 LETM1O95202 739 aaPredicted RBP15.22■□□□□ 0.03
APEX1-216ENST00000557159 LRRC59Q96AG4 307 aaKnown RBP15.22■□□□□ 0.03
APEX1-216ENST00000557159 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
APEX1-216ENST00000557159 DLG5Q8TDM6 1919 aa15.22■□□□□ 0.03
APEX1-216ENST00000557159 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
APEX1-216ENST00000557159 TWISTNBQ3B726 338 aaPredicted RBP15.22■□□□□ 0.03
APEX1-216ENST00000557159 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
APEX1-216ENST00000557159 NRKQ7Z2Y5 1582 aa15.21■□□□□ 0.03
APEX1-216ENST00000557159 TRPM3Q9HCF6 1732 aaPredicted RBP15.21■□□□□ 0.03
APEX1-216ENST00000557159 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
APEX1-216ENST00000557159 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
APEX1-216ENST00000557159 HSPA1LP34931 641 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms