RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SYTL4Q96C24 671 aaPredicted RBP22.81■■□□□ 1.24
TUBB3-211ENST00000556536 CAMKK2Q96RR4 588 aa22.81■■□□□ 1.24
TUBB3-211ENST00000556536 SLC52A2Q9HAB3 445 aa22.81■■□□□ 1.24
TUBB3-211ENST00000556536 ZNF521Q96K83 1311 aa22.81■■□□□ 1.24
TUBB3-211ENST00000556536 YTHDC1Q96MU7 727 aaKnown RBP22.8■■□□□ 1.24
TUBB3-211ENST00000556536 MRC1P22897 1456 aa22.79■■□□□ 1.24
TUBB3-211ENST00000556536 TRIM37O94972 964 aa22.79■■□□□ 1.24
TUBB3-211ENST00000556536 TEFQ10587 303 aa22.79■■□□□ 1.24
TUBB3-211ENST00000556536 PIGBQ92521 554 aa22.79■■□□□ 1.24
TUBB3-211ENST00000556536 DOT1LQ8TEK3 1739 aa22.78■■□□□ 1.24
TUBB3-211ENST00000556536 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
TUBB3-211ENST00000556536 SCN11AQ9UI33 1791 aa22.77■■□□□ 1.24
TUBB3-211ENST00000556536 APBA3O96018 575 aa22.76■■□□□ 1.23
TUBB3-211ENST00000556536 TAF7Q15545 349 aaPredicted RBP22.76■■□□□ 1.23
TUBB3-211ENST00000556536 WDR63Q8IWG1 891 aa22.76■■□□□ 1.23
TUBB3-211ENST00000556536 MIS18AQ9NYP9 233 aa22.76■■□□□ 1.23
TUBB3-211ENST00000556536 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
TUBB3-211ENST00000556536 CALD1Q05682 793 aaKnown RBP22.74■■□□□ 1.23
TUBB3-211ENST00000556536 SPINK5Q9NQ38 1064 aaPredicted RBP22.74■■□□□ 1.23
TUBB3-211ENST00000556536 LAS1LQ9Y4W2 734 aaKnown RBP22.74■■□□□ 1.23
TUBB3-211ENST00000556536 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
TUBB3-211ENST00000556536 RREB1Q92766 1687 aa22.73■■□□□ 1.23
TUBB3-211ENST00000556536 ZBED9Q6R2W3 1325 aa22.73■■□□□ 1.23
TUBB3-211ENST00000556536 NHSQ6T4R5 1651 aa22.72■■□□□ 1.23
TUBB3-211ENST00000556536 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
TUBB3-211ENST00000556536 SLC39A6Q13433 755 aa22.72■■□□□ 1.23
TUBB3-211ENST00000556536 ATG3Q9NT62 314 aa22.72■■□□□ 1.23
TUBB3-211ENST00000556536 ASAP1Q9ULH1 1129 aa22.72■■□□□ 1.23
TUBB3-211ENST00000556536 IL16Q14005 1332 aa22.72■■□□□ 1.23
TUBB3-211ENST00000556536 CHL1O00533 1208 aa22.71■■□□□ 1.23
TUBB3-211ENST00000556536 KCNQ3O43525 872 aa22.71■■□□□ 1.23
TUBB3-211ENST00000556536 YY1P25490 414 aa22.71■■□□□ 1.23
TUBB3-211ENST00000556536 CDCA7LQ96GN5 454 aa22.71■■□□□ 1.23
TUBB3-211ENST00000556536 CFAP44Q96MT7 982 aa22.71■■□□□ 1.23
TUBB3-211ENST00000556536 IFT57Q9NWB7 429 aa22.71■■□□□ 1.23
TUBB3-211ENST00000556536 GOLGA2Q08379 1002 aa22.7■■□□□ 1.22
TUBB3-211ENST00000556536 NBPF14Q5TI25 921 aa22.7■■□□□ 1.22
TUBB3-211ENST00000556536 TSPYL4Q9UJ04 414 aa22.7■■□□□ 1.22
TUBB3-211ENST00000556536 NUP188Q5SRE5 1749 aa22.69■■□□□ 1.22
TUBB3-211ENST00000556536 GNAI1P63096 354 aa22.69■■□□□ 1.22
TUBB3-211ENST00000556536 ITGB4P16144 1822 aa22.68■■□□□ 1.22
TUBB3-211ENST00000556536 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
TUBB3-211ENST00000556536 SIPA1L3O60292 1781 aaPredicted RBP22.68■■□□□ 1.22
TUBB3-211ENST00000556536 TSR2Q969E8 191 aaKnown RBP22.68■■□□□ 1.22
TUBB3-211ENST00000556536 MBIPQ9NS73 344 aa22.68■■□□□ 1.22
TUBB3-211ENST00000556536 BABAM1Q9NWV8 329 aa22.68■■□□□ 1.22
TUBB3-211ENST00000556536 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
TUBB3-211ENST00000556536 ZNF790Q6PG37 636 aa22.67■■□□□ 1.22
TUBB3-211ENST00000556536 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
TUBB3-211ENST00000556536 PALLDQ8WX93 1383 aa22.64■■□□□ 1.22
TUBB3-211ENST00000556536 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
TUBB3-211ENST00000556536 E9PSI1 815 aa22.64■■□□□ 1.21
TUBB3-211ENST00000556536 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
TUBB3-211ENST00000556536 TTC5Q8N0Z6 440 aa22.64■■□□□ 1.21
TUBB3-211ENST00000556536 SMARCC1Q92922 1105 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-211ENST00000556536 EIF4A1P60842 406 aaKnown RBP22.63■■□□□ 1.21
TUBB3-211ENST00000556536 ZNF496Q96IT1 587 aaPredicted RBP22.63■■□□□ 1.21
TUBB3-211ENST00000556536 MYH16Q9H6N6 1097 aa22.63■■□□□ 1.21
TUBB3-211ENST00000556536 SPON1Q9HCB6 807 aa22.63■■□□□ 1.21
TUBB3-211ENST00000556536 PPP1R1BQ9UD71 204 aaPredicted RBP22.63■■□□□ 1.21
TUBB3-211ENST00000556536 BTAF1O14981 1849 aa22.63■■□□□ 1.21
TUBB3-211ENST00000556536 PAPPAQ13219 1627 aa22.63■■□□□ 1.21
TUBB3-211ENST00000556536 KCPQ6ZWJ8 1503 aa22.62■■□□□ 1.21
TUBB3-211ENST00000556536 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
TUBB3-211ENST00000556536 TRMT2AQ8IZ69 625 aaKnown RBP22.62■■□□□ 1.21
TUBB3-211ENST00000556536 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
TUBB3-211ENST00000556536 SLC4A9Q96Q91 983 aa22.61■■□□□ 1.21
TUBB3-211ENST00000556536 RBM42Q9BTD8 480 aaKnown RBP22.61■■□□□ 1.21
TUBB3-211ENST00000556536 DUSP27Q5VZP5 1158 aa22.6■■□□□ 1.21
TUBB3-211ENST00000556536 KAT6BQ8WYB5 2073 aa22.6■■□□□ 1.21
TUBB3-211ENST00000556536 KDM3BQ7LBC6 1761 aa22.6■■□□□ 1.21
TUBB3-211ENST00000556536 FMNL2Q96PY5 1086 aa22.59■■□□□ 1.21
TUBB3-211ENST00000556536 LOC102724428A0A0B4J2F2 783 aa22.58■■□□□ 1.21
TUBB3-211ENST00000556536 PLSCR1O15162 318 aa22.58■■□□□ 1.21
TUBB3-211ENST00000556536 KCNQ4P56696 695 aa22.58■■□□□ 1.21
TUBB3-211ENST00000556536 SIK1P57059 783 aa22.58■■□□□ 1.21
TUBB3-211ENST00000556536 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
TUBB3-211ENST00000556536 HEG1Q9ULI3 1381 aa22.58■■□□□ 1.21
TUBB3-211ENST00000556536 PRAMEF22A3QJZ6 481 aa22.57■■□□□ 1.2
TUBB3-211ENST00000556536 EXOSC9Q06265 439 aaKnown RBP22.57■■□□□ 1.2
TUBB3-211ENST00000556536 PROM2Q8N271 834 aa22.57■■□□□ 1.2
TUBB3-211ENST00000556536 ELL2O00472 640 aaPredicted RBP22.55■■□□□ 1.2
TUBB3-211ENST00000556536 GIGYF1O75420 1035 aaPredicted RBP22.55■■□□□ 1.2
TUBB3-211ENST00000556536 ITPK1Q13572 414 aa22.55■■□□□ 1.2
TUBB3-211ENST00000556536 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
TUBB3-211ENST00000556536 CCNL1Q9UK58 526 aaPredicted RBP22.55■■□□□ 1.2
TUBB3-211ENST00000556536 UBR2Q8IWV8 1755 aa22.55■■□□□ 1.2
TUBB3-211ENST00000556536 RGPD3A6NKT7 1758 aaPredicted RBP22.54■■□□□ 1.2
TUBB3-211ENST00000556536 RGPD4Q7Z3J3 1758 aa22.54■■□□□ 1.2
TUBB3-211ENST00000556536 ATP6V1AP38606 617 aa22.54■■□□□ 1.2
TUBB3-211ENST00000556536 TXNRD1Q16881 649 aa22.54■■□□□ 1.2
TUBB3-211ENST00000556536 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
TUBB3-211ENST00000556536 VSIG10Q8N0Z9 540 aa22.54■■□□□ 1.2
TUBB3-211ENST00000556536 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
TUBB3-211ENST00000556536 SNRPA1P09661 255 aaKnown RBP22.53■■□□□ 1.2
TUBB3-211ENST00000556536 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
TUBB3-211ENST00000556536 TWISTNBQ3B726 338 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-211ENST00000556536 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
TUBB3-211ENST00000556536 LINC00116Q8NCU8 138 aa22.5■■□□□ 1.19
TUBB3-211ENST00000556536 LY75O60449 1722 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms